eF-site ID 6g63-N
PDB Code 6g63
Chain N

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Title RNase E in complex with sRNA RrpA
Classification RNA BINDING PROTEIN
Compound Ribonuclease E
Source (6G63)
Sequence N:  MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKAN
IYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPR
PNIKDVLREGQEVIVQIDKEERGNKGAALTTFISLAGSYL
VLMPNNPRAGGISRRIELKEALASLELPEGMGLIVRTAGV
GKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNV
IVRAFRDYLRQDIGEILIDNPKVLELARQHIAALGRPDFS
SKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVI
DSTEALTAIRINSARATDIEETAFNTNLEAADEIARQLRL
RDLGGLIVIRFIDMTPVRHQRAVENRLREAVRQDRARIQI
SHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDN
ESLSLSILRLIEEEALKENTQEVHAIVPVPIASYLLNEKR
SAVNAIETRQDGVRCVIVPNDQMETPHYHVLRVRKGEETP
TLSYMLPKLHEEAM
Description (1)  Ribonuclease E/RNA Complex


Functional site

1) chain N
residue 404
type
sequence C
description binding site for residue ZN L 601
source : AC2

2) chain N
residue 407
type
sequence C
description binding site for residue ZN L 601
source : AC2

3) chain N
residue 140
type
sequence S
description binding site for residue U N 601
source : AC3

4) chain N
residue 142
type
sequence R
description binding site for residue U N 601
source : AC3

5) chain N
residue 167
type
sequence I
description binding site for residue U N 601
source : AC3

6) chain N
residue 169
type
sequence R
description binding site for residue U N 601
source : AC3

7) chain N
residue 170
type
sequence T
description binding site for residue U N 601
source : AC3

8) chain N
residue 223
type
sequence R
description binding site for residue U N 601
source : AC3

9) chain N
residue 371
type
sequence R
description binding site for residue U N 601
source : AC3

10) chain N
residue 303
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:16237448
source Swiss-Prot : SWS_FT_FI1

11) chain N
residue 346
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:16237448
source Swiss-Prot : SWS_FT_FI1

12) chain N
residue 404
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:15779893, ECO:0000269|PubMed:18682225
source Swiss-Prot : SWS_FT_FI2

13) chain N
residue 407
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:15779893, ECO:0000269|PubMed:18682225
source Swiss-Prot : SWS_FT_FI2


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