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eF-site ID
|
6g63-L |
|
PDB Code
|
6g63 |
|
Chain
|
L |
|
click to enlarge
|
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Title
|
RNase E in complex with sRNA RrpA |
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Classification
|
RNA BINDING PROTEIN |
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Compound
|
Ribonuclease E |
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Source
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(6G63) |
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Sequence
|
L: |
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKAN
IYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPR
PNIKDVLREGQEVIVQIDKEERGNKGAALTTFISLAGSYL
VLMPNNPRAGGISRRIELKEALASLELPEGMGLIVRTAGV
GKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNV
IVRAFRDYLRQDIGEILIDNPKVLELARQHIAALGRPDFS
SKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVI
DSTEALTAIRINSARGDIEETAFNTNLEAADEIARQLRLR
DLGGLIVIRFIDMTPVRHQRAVENRLREAVRQDRARIQIS
HISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNE
SLSLSILRLIEEEALKENTQEVHAIVPVPIASYLLNEKRS
AVNAIETRQDGVRCVIVPNDQMETPHYHVLRVRKGEETPT
LSYMLPKLHEEAM
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Description
|
(1) |
Ribonuclease E/RNA Complex
|
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Functional site
|
|
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1)
|
chain |
L |
| residue |
404 |
| type |
|
| sequence |
C
|
| description |
binding site for residue ZN L 601
|
| source |
: AC2
|
|
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2)
|
chain |
L |
| residue |
407 |
| type |
|
| sequence |
C
|
| description |
binding site for residue ZN L 601
|
| source |
: AC2
|
|
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3)
|
chain |
L |
| residue |
303 |
| type |
BINDING |
| sequence |
R
|
| description |
BINDING => ECO:0000269|PubMed:16237448
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
4)
|
chain |
L |
| residue |
346 |
| type |
BINDING |
| sequence |
R
|
| description |
BINDING => ECO:0000269|PubMed:16237448
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
5)
|
chain |
L |
| residue |
404 |
| type |
BINDING |
| sequence |
C
|
| description |
BINDING => ECO:0000269|PubMed:15779893, ECO:0000269|PubMed:18682225
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
6)
|
chain |
L |
| residue |
407 |
| type |
BINDING |
| sequence |
C
|
| description |
BINDING => ECO:0000269|PubMed:15779893, ECO:0000269|PubMed:18682225
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
|