eF-site ID 6g63-AGLN PDB Code 6g63 Chain A, G, L, N click to enlarge Title RNase E in complex with sRNA RrpA Classification RNA BINDING PROTEIN Compound Ribonuclease E Source (6G63) Sequence A:  RMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIY KGKITRIEEAAFVDYGAERHGFLPLKEIAREYFPRPNIKD VLREGQEVIVQIDKEERGNKGAALTTFISLAGSYLVLMPA GGISRRIEGDDRTELKEALASLELPEGMGLIVRTAGVGKS AEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVR AFRDYLRQDIGEILIDNPKVLELARQHIAALGRPDFSSKI KLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDST EALTAIRINSARATRGGDIEETAFNTNLEAADEIARQLRL RDLGGLIVIRFIDMTPVRHQRAVENRLREAVRQDRARIQI SHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDN ESLSLSILRLIEEEALKENTQEVHAIVPVPIASYLLNEKR SAVNAIETRQDGVRCVIVPNDQMETPHYHVLRVRKGEETP TLSYMLPKLHEEAM G:  MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKAN IYKGKITRIEEAAFVDYGAERHGFLPLKEIAREYFPRPNI KDVLREGQEVIVQIDKEERGNKGAALTTFISLAGSYLVLM PNNPRAGGISRGDDRTELKEALASLGMGLIVRTAGVGKSA EALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRA FRDYLRQDIGEILIDNPKVLELARQHIAALGRPDFSSKIK LYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTE ALTAIRINSARATRGGDIEETAFNTNLEAADEIARQLRLR DLGGLIVIRFIDMTPVRHQRAVENRLREAVRQDRARIQIS HISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNE SLSLSILRLIEEEALKENTQEVHAIVPVPIASYLLNEKRS AVNAIETRQDGVRCVIVPNDQMETPHYHVLRVRKGEETPT LSYMLPKLHEEAM L:  MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKAN IYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPR PNIKDVLREGQEVIVQIDKEERGNKGAALTTFISLAGSYL VLMPNNPRAGGISRRIELKEALASLELPEGMGLIVRTAGV GKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNV IVRAFRDYLRQDIGEILIDNPKVLELARQHIAALGRPDFS SKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVI DSTEALTAIRINSARGDIEETAFNTNLEAADEIARQLRLR DLGGLIVIRFIDMTPVRHQRAVENRLREAVRQDRARIQIS HISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNE SLSLSILRLIEEEALKENTQEVHAIVPVPIASYLLNEKRS AVNAIETRQDGVRCVIVPNDQMETPHYHVLRVRKGEETPT LSYMLPKLHEEAM N:  MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKAN IYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPR PNIKDVLREGQEVIVQIDKEERGNKGAALTTFISLAGSYL VLMPNNPRAGGISRRIELKEALASLELPEGMGLIVRTAGV GKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNV IVRAFRDYLRQDIGEILIDNPKVLELARQHIAALGRPDFS SKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVI DSTEALTAIRINSARATDIEETAFNTNLEAADEIARQLRL RDLGGLIVIRFIDMTPVRHQRAVENRLREAVRQDRARIQI SHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDN ESLSLSILRLIEEEALKENTQEVHAIVPVPIASYLLNEKR SAVNAIETRQDGVRCVIVPNDQMETPHYHVLRVRKGEETP TLSYMLPKLHEEAM Description (1)  Ribonuclease E/RNA Complex Functional site 1) chain A residue 404 type sequence C description binding site for residue ZN A 601 source : AC1 2) chain A residue 407 type sequence C description binding site for residue ZN A 601 source : AC1 3) chain G residue 404 type sequence C description binding site for residue ZN A 601 source : AC1 4) chain G residue 407 type sequence C description binding site for residue ZN A 601 source : AC1 5) chain L residue 404 type sequence C description binding site for residue ZN L 601 source : AC2 6) chain L residue 407 type sequence C description binding site for residue ZN L 601 source : AC2 7) chain N residue 404 type sequence C description binding site for residue ZN L 601 source : AC2 8) chain N residue 407 type sequence C description binding site for residue ZN L 601 source : AC2 9) chain N residue 140 type sequence S description binding site for residue U N 601 source : AC3 10) chain N residue 142 type sequence R description binding site for residue U N 601 source : AC3 11) chain N residue 167 type sequence I description binding site for residue U N 601 source : AC3 12) chain N residue 169 type sequence R description binding site for residue U N 601 source : AC3 13) chain N residue 170 type sequence T description binding site for residue U N 601 source : AC3 14) chain N residue 223 type sequence R description binding site for residue U N 601 source : AC3 15) chain N residue 371 type sequence R description binding site for residue U N 601 source : AC3 16) chain A residue 303 type BINDING sequence R description BINDING => ECO:0000269|PubMed:16237448 source Swiss-Prot : SWS_FT_FI1 17) chain A residue 346 type BINDING sequence R description BINDING => ECO:0000269|PubMed:16237448 source Swiss-Prot : SWS_FT_FI1 18) chain G residue 303 type BINDING sequence R description BINDING => ECO:0000269|PubMed:16237448 source Swiss-Prot : SWS_FT_FI1 19) chain G residue 346 type BINDING sequence R description BINDING => ECO:0000269|PubMed:16237448 source Swiss-Prot : SWS_FT_FI1 20) chain L residue 303 type BINDING sequence R description BINDING => ECO:0000269|PubMed:16237448 source Swiss-Prot : SWS_FT_FI1 21) chain L residue 346 type BINDING sequence R description BINDING => ECO:0000269|PubMed:16237448 source Swiss-Prot : SWS_FT_FI1 22) chain N residue 303 type BINDING sequence R description BINDING => ECO:0000269|PubMed:16237448 source Swiss-Prot : SWS_FT_FI1 23) chain N residue 346 type BINDING sequence R description BINDING => ECO:0000269|PubMed:16237448 source Swiss-Prot : SWS_FT_FI1 24) chain A residue 404 type BINDING sequence C description BINDING => ECO:0000269|PubMed:15779893, ECO:0000269|PubMed:18682225 source Swiss-Prot : SWS_FT_FI2 25) chain A residue 407 type BINDING sequence C description BINDING => ECO:0000269|PubMed:15779893, ECO:0000269|PubMed:18682225 source Swiss-Prot : SWS_FT_FI2 26) chain G residue 404 type BINDING sequence C description BINDING => ECO:0000269|PubMed:15779893, ECO:0000269|PubMed:18682225 source Swiss-Prot : SWS_FT_FI2 27) chain G residue 407 type BINDING sequence C description BINDING => ECO:0000269|PubMed:15779893, ECO:0000269|PubMed:18682225 source Swiss-Prot : SWS_FT_FI2 28) chain L residue 404 type BINDING sequence C description BINDING => ECO:0000269|PubMed:15779893, ECO:0000269|PubMed:18682225 source Swiss-Prot : SWS_FT_FI2 29) chain L residue 407 type BINDING sequence C description BINDING => ECO:0000269|PubMed:15779893, ECO:0000269|PubMed:18682225 source Swiss-Prot : SWS_FT_FI2 30) chain N residue 404 type BINDING sequence C description BINDING => ECO:0000269|PubMed:15779893, ECO:0000269|PubMed:18682225 source Swiss-Prot : SWS_FT_FI2 31) chain N residue 407 type BINDING sequence C description BINDING => ECO:0000269|PubMed:15779893, ECO:0000269|PubMed:18682225 source Swiss-Prot : SWS_FT_FI2

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