eF-site ID 6g59-B PDB Code 6g59 Chain B click to enlarge Title Structure of the alanine racemase from Staphylococcus aureus in complex with an pyridoxal-6- phosphate derivative Classification BIOSYNTHETIC PROTEIN Compound Alanine racemase 1 Source (ALR1_STAAM) Sequence B:  AGFSDKYYRSAYMNVDLNAVASNFKVFSTLHPNKTVMAVV KANAYGLGSVKVARHLMENGATFFAVATLDEAIELRMHGI TAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNI SGEQEKKLWLHIKLDTGMGRLGIKDTNTYQEVIEIIQQYE QLVFEGVFTHFACADEPGDMTTEQYQRFKDMVNEAIKPEY IHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVK VHLKPSVQLIANVVQTKTLQAGESVSYGATYTATDPTTIA LLPIGYADGYLRIMQGSFVNVNGHQCEVIGRVCMDQTIVK VPDQVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVLC NLSRRLPRIYHDGDQRFVTNELLK Description Functional site 1) chain B residue 135 type sequence G description binding site for residue NA A 408 source : AC8 2) chain B residue 136 type sequence M description binding site for residue NA A 408 source : AC8 3) chain B residue 170 type sequence A description binding site for residue NA A 408 source : AC8 4) chain B residue 240 type sequence H description binding site for residue SO4 B 402 source : AD1 5) chain B residue 243 type sequence P description binding site for residue SO4 B 402 source : AD1 6) chain B residue 335 type sequence H description binding site for residue SO4 B 402 source : AD1 7) chain B residue 336 type sequence R description binding site for residue SO4 B 402 source : AD1 8) chain B residue 5 type sequence Y description binding site for residue SO4 B 403 source : AD2 9) chain B residue 10 type sequence Y description binding site for residue SO4 B 403 source : AD2 10) chain B residue 367 type sequence I description binding site for residue SO4 B 403 source : AD2 11) chain B residue 374 type sequence R description binding site for residue SO4 B 403 source : AD2 12) chain B residue 154 type sequence I description binding site for residue NA B 404 source : AD3 13) chain B residue 157 type sequence Y description binding site for residue NA B 404 source : AD3 14) chain B residue 160 type sequence L description binding site for residue NA B 404 source : AD3 15) chain B residue 29 type sequence H description binding site for residue CL B 405 source : AD4 16) chain B residue 31 type sequence N description binding site for residue CL B 405 source : AD4 17) chain B residue 32 type sequence K description binding site for residue CL B 405 source : AD4 18) chain B residue 37 type sequence V description binding site for Di-peptide EM2 B 401 and LYS B 39 source : AD5 19) chain B residue 38 type sequence V description binding site for Di-peptide EM2 B 401 and LYS B 39 source : AD5 20) chain B residue 40 type sequence A description binding site for Di-peptide EM2 B 401 and LYS B 39 source : AD5 21) chain B residue 41 type sequence N description binding site for Di-peptide EM2 B 401 and LYS B 39 source : AD5 22) chain B residue 42 type sequence A description binding site for Di-peptide EM2 B 401 and LYS B 39 source : AD5 23) chain B residue 43 type sequence Y description binding site for Di-peptide EM2 B 401 and LYS B 39 source : AD5 24) chain B residue 63 type sequence A description binding site for Di-peptide EM2 B 401 and LYS B 39 source : AD5 25) chain B residue 65 type sequence A description binding site for Di-peptide EM2 B 401 and LYS B 39 source : AD5 26) chain B residue 69 type sequence E description binding site for Di-peptide EM2 B 401 and LYS B 39 source : AD5 27) chain B residue 168 type sequence H description binding site for Di-peptide EM2 B 401 and LYS B 39 source : AD5 28) chain B residue 203 type sequence N description binding site for Di-peptide EM2 B 401 and LYS B 39 source : AD5 29) chain B residue 204 type sequence S description binding site for Di-peptide EM2 B 401 and LYS B 39 source : AD5 30) chain B residue 219 type sequence R description binding site for Di-peptide EM2 B 401 and LYS B 39 source : AD5 31) chain B residue 221 type sequence G description binding site for Di-peptide EM2 B 401 and LYS B 39 source : AD5 32) chain B residue 222 type sequence I description binding site for Di-peptide EM2 B 401 and LYS B 39 source : AD5 33) chain B residue 354 type sequence Y description binding site for Di-peptide EM2 B 401 and LYS B 39 source : AD5 34) chain B residue 39 type ACT_SITE sequence K description Proton acceptor; specific for D-alanine => ECO:0000305|PubMed:22194336 source Swiss-Prot : SWS_FT_FI1 35) chain B residue 265 type ACT_SITE sequence Y description Proton acceptor; specific for L-alanine => ECO:0000305|PubMed:22194336 source Swiss-Prot : SWS_FT_FI2 36) chain B residue 138 type BINDING sequence R description BINDING => ECO:0000255|HAMAP-Rule:MF_01201 source Swiss-Prot : SWS_FT_FI3 37) chain B residue 312 type BINDING sequence M description BINDING => ECO:0000305 source Swiss-Prot : SWS_FT_FI4 38) chain B residue 39 type MOD_RES sequence K description N6-(pyridoxal phosphate)lysine source Swiss-Prot : SWS_FT_FI5

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