eF-site ID 6g58-AB PDB Code 6g58 Chain A, B click to enlarge Title Structure of the alanine racemase from Staphylococcus aureus in complex with a pyridoxal 5' phosphate-derivative Classification BIOSYNTHETIC PROTEIN Compound Alanine racemase 1 Source (ALR1_STAAM) Sequence A:  FSDKYYRSAYMNVDLNAVASNFKVFSTLHPNKTVMAVVKA NAYGLGSVKVARHLMENGATFFAVATLDEAIELRMHGITA KILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISG EQEKKLWLHIKLDTGMGRLGIKDTNTYQEVIEIIQQYEQL VFEGVFTHFACADEPGDMTTEQYQRFKDMVNEAIKPEYIH CQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVH LKPSVQLIANVVQTKTLQAGESVSYGATYTATDPTTIALL PIGYADGYLRIMQGSFVNVNGHQCEVIGRVCMDQTIVKVP DQVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVLCNL SRRLPRIYHDGDQRFVTNELLK B:  FSDKYYRSAYMNVDLNAVASNFKVFSTLHPNKTVMAVVKA NAYGLGSVKVARHLMENGATFFAVATLDEAIELRMHGITA KILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISG EQEKKLWLHIKLDTGMGRLGIKDTNTYQEVIEIIQQYEQL VFEGVFTHFACADEPGDMTTEQYQRFKDMVNEAIKPEYIH CQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVH LKPSVQLIANVVQTKTLQAGESVSYGATYTATDPTTIALL PIGYADGYLRIMQGSFVNVNGHQCEVIGRVCMDQTIVKVP DQVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVLCNL SRRLPRIYHDGDQRFVTNELLK Description Functional site 1) chain A residue 39 type sequence K description binding site for residue EOW A 401 source : AC1 2) chain A residue 43 type sequence Y description binding site for residue EOW A 401 source : AC1 3) chain A residue 85 type sequence L description binding site for residue EOW A 401 source : AC1 4) chain A residue 131 type sequence K description binding site for residue EOW A 401 source : AC1 5) chain A residue 138 type sequence R description binding site for residue EOW A 401 source : AC1 6) chain A residue 168 type sequence H description binding site for residue EOW A 401 source : AC1 7) chain A residue 203 type sequence N description binding site for residue EOW A 401 source : AC1 8) chain A residue 204 type sequence S description binding site for residue EOW A 401 source : AC1 9) chain A residue 219 type sequence R description binding site for residue EOW A 401 source : AC1 10) chain A residue 221 type sequence G description binding site for residue EOW A 401 source : AC1 11) chain A residue 222 type sequence I description binding site for residue EOW A 401 source : AC1 12) chain A residue 354 type sequence Y description binding site for residue EOW A 401 source : AC1 13) chain A residue 359 type sequence N description binding site for residue NA A 402 source : AC2 14) chain A residue 154 type sequence I description binding site for residue NA A 403 source : AC3 15) chain A residue 157 type sequence Y description binding site for residue NA A 403 source : AC3 16) chain A residue 160 type sequence L description binding site for residue NA A 403 source : AC3 17) chain A residue 284 type sequence Y description binding site for residue NA A 404 source : AC4 18) chain A residue 290 type sequence R description binding site for residue MPD A 405 source : AC5 19) chain A residue 309 type sequence R description binding site for residue MPD A 405 source : AC5 20) chain A residue 209 type sequence L description binding site for residue MPD A 406 source : AC6 21) chain A residue 210 type sequence M description binding site for residue MPD A 406 source : AC6 22) chain A residue 79 type sequence T description binding site for residue MPD A 407 source : AC7 23) chain A residue 100 type sequence R description binding site for residue MPD A 407 source : AC7 24) chain A residue 265 type sequence Y description binding site for residue ACT A 408 source : AC8 25) chain A residue 284 type sequence Y description binding site for residue ACT A 408 source : AC8 26) chain A residue 311 type sequence C description binding site for residue ACT A 408 source : AC8 27) chain A residue 312 type sequence M description binding site for residue ACT A 408 source : AC8 28) chain B residue 39 type sequence K description binding site for residue ACT A 408 source : AC8 29) chain A residue 8 type sequence S description binding site for residue ACT A 409 source : AC9 30) chain A residue 251 type sequence V description binding site for residue ACT A 409 source : AC9 31) chain A residue 326 type sequence G description binding site for residue ACT A 409 source : AC9 32) chain B residue 89 type sequence P description binding site for residue ACT A 409 source : AC9 33) chain A residue 31 type sequence N description binding site for residue ACT A 410 source : AD1 34) chain A residue 32 type sequence K description binding site for residue ACT A 410 source : AD1 35) chain A residue 213 type sequence Q description binding site for residue ACT A 410 source : AD1 36) chain A residue 215 type sequence C description binding site for residue ACT A 410 source : AD1 37) chain A residue 236 type sequence K description binding site for residue ACT A 411 source : AD2 38) chain B residue 207 type sequence S description binding site for residue ACT A 411 source : AD2 39) chain B residue 210 type sequence M description binding site for residue ACT A 411 source : AD2 40) chain A residue 5 type sequence Y description binding site for residue ACT A 412 source : AD3 41) chain A residue 10 type sequence Y description binding site for residue ACT A 412 source : AD3 42) chain A residue 367 type sequence I description binding site for residue ACT A 412 source : AD3 43) chain A residue 374 type sequence R description binding site for residue ACT A 412 source : AD3 44) chain B residue 154 type sequence I description binding site for residue NA B 402 source : AD4 45) chain B residue 157 type sequence Y description binding site for residue NA B 402 source : AD4 46) chain B residue 160 type sequence L description binding site for residue NA B 402 source : AD4 47) chain B residue 265 type sequence Y description binding site for residue NA B 403 source : AD5 48) chain B residue 284 type sequence Y description binding site for residue NA B 403 source : AD5 49) chain B residue 213 type sequence Q description binding site for residue NA B 404 source : AD6 50) chain B residue 215 type sequence C description binding site for residue NA B 404 source : AD6 51) chain B residue 131 type sequence K description binding site for residue CL B 405 source : AD7 52) chain B residue 136 type sequence M description binding site for residue CL B 405 source : AD7 53) chain B residue 138 type sequence R description binding site for residue CL B 405 source : AD7 54) chain B residue 290 type sequence R description binding site for residue MPD B 406 source : AD8 55) chain A residue 5 type sequence Y description binding site for residue MPD B 407 source : AD9 56) chain A residue 6 type sequence Y description binding site for residue MPD B 407 source : AD9 57) chain A residue 8 type sequence S description binding site for residue MPD B 407 source : AD9 58) chain B residue 91 type sequence K description binding site for residue MPD B 407 source : AD9 59) chain B residue 92 type sequence D description binding site for residue MPD B 407 source : AD9 60) chain A residue 258 type sequence Q description binding site for residue MPD B 408 source : AE1 61) chain B residue 74 type sequence R description binding site for residue MPD B 408 source : AE1 62) chain B residue 79 type sequence T description binding site for residue MPD B 408 source : AE1 63) chain B residue 100 type sequence R description binding site for residue MPD B 408 source : AE1 64) chain B residue 30 type sequence P description binding site for residue MPD B 409 source : AE2 65) chain B residue 31 type sequence N description binding site for residue MPD B 409 source : AE2 66) chain B residue 56 type sequence E description binding site for residue MPD B 410 source : AE3 67) chain B residue 77 type sequence G description binding site for residue MPD B 410 source : AE3 68) chain B residue 79 type sequence T description binding site for residue MPD B 410 source : AE3 69) chain B residue 118 type sequence I description binding site for residue MRD B 411 source : AE4 70) chain B residue 159 type sequence Q description binding site for residue MRD B 411 source : AE4 71) chain A residue 39 type sequence K description binding site for residue ACT B 412 source : AE5 72) chain B residue 265 type sequence Y description binding site for residue ACT B 412 source : AE5 73) chain B residue 284 type sequence Y description binding site for residue ACT B 412 source : AE5 74) chain B residue 311 type sequence C description binding site for residue ACT B 412 source : AE5 75) chain B residue 312 type sequence M description binding site for residue ACT B 412 source : AE5 76) chain A residue 252 type sequence V description binding site for residue GOL B 413 source : AE6 77) chain A residue 281 type sequence P description binding site for residue GOL B 413 source : AE6 78) chain A residue 314 type sequence Q description binding site for residue GOL B 413 source : AE6 79) chain B residue 86 type sequence G description binding site for residue GOL B 413 source : AE6 80) chain B residue 87 type sequence V description binding site for residue GOL B 413 source : AE6 81) chain A residue 312 type sequence M description binding site for Di-peptide EOW B 401 and LYS B 39 source : AE7 82) chain A residue 313 type sequence D description binding site for Di-peptide EOW B 401 and LYS B 39 source : AE7 83) chain B residue 37 type sequence V description binding site for Di-peptide EOW B 401 and LYS B 39 source : AE7 84) chain B residue 38 type sequence V description binding site for Di-peptide EOW B 401 and LYS B 39 source : AE7 85) chain B residue 40 type sequence A description binding site for Di-peptide EOW B 401 and LYS B 39 source : AE7 86) chain B residue 41 type sequence N description binding site for Di-peptide EOW B 401 and LYS B 39 source : AE7 87) chain B residue 42 type sequence A description binding site for Di-peptide EOW B 401 and LYS B 39 source : AE7 88) chain B residue 43 type sequence Y description binding site for Di-peptide EOW B 401 and LYS B 39 source : AE7 89) chain B residue 63 type sequence A description binding site for Di-peptide EOW B 401 and LYS B 39 source : AE7 90) chain B residue 65 type sequence A description binding site for Di-peptide EOW B 401 and LYS B 39 source : AE7 91) chain B residue 69 type sequence E description binding site for Di-peptide EOW B 401 and LYS B 39 source : AE7 92) chain B residue 85 type sequence L description binding site for Di-peptide EOW B 401 and LYS B 39 source : AE7 93) chain B residue 131 type sequence K description binding site for Di-peptide EOW B 401 and LYS B 39 source : AE7 94) chain B residue 138 type sequence R description binding site for Di-peptide EOW B 401 and LYS B 39 source : AE7 95) chain B residue 168 type sequence H description binding site for Di-peptide EOW B 401 and LYS B 39 source : AE7 96) chain B residue 203 type sequence N description binding site for Di-peptide EOW B 401 and LYS B 39 source : AE7 97) chain B residue 204 type sequence S description binding site for Di-peptide EOW B 401 and LYS B 39 source : AE7 98) chain B residue 219 type sequence R description binding site for Di-peptide EOW B 401 and LYS B 39 source : AE7 99) chain B residue 221 type sequence G description binding site for Di-peptide EOW B 401 and LYS B 39 source : AE7 100) chain B residue 222 type sequence I description binding site for Di-peptide EOW B 401 and LYS B 39 source : AE7 101) chain B residue 354 type sequence Y description binding site for Di-peptide EOW B 401 and LYS B 39 source : AE7 102) chain A residue 36-46 type prosite sequence AVVKANAYGLG description ALANINE_RACEMASE Alanine racemase pyridoxal-phosphate attachment site. AVvKANAYGLG source prosite : PS00395 103) chain A residue 39 type MOD_RES sequence K description N6-(pyridoxal phosphate)lysine source Swiss-Prot : SWS_FT_FI5 104) chain B residue 39 type MOD_RES sequence K description N6-(pyridoxal phosphate)lysine source Swiss-Prot : SWS_FT_FI5 105) chain A residue 39 type ACT_SITE sequence K description Proton acceptor; specific for D-alanine => ECO:0000305|PubMed:22194336 source Swiss-Prot : SWS_FT_FI1 106) chain B residue 39 type ACT_SITE sequence K description Proton acceptor; specific for D-alanine => ECO:0000305|PubMed:22194336 source Swiss-Prot : SWS_FT_FI1 107) chain A residue 265 type ACT_SITE sequence Y description Proton acceptor; specific for L-alanine => ECO:0000305|PubMed:22194336 source Swiss-Prot : SWS_FT_FI2 108) chain B residue 265 type ACT_SITE sequence Y description Proton acceptor; specific for L-alanine => ECO:0000305|PubMed:22194336 source Swiss-Prot : SWS_FT_FI2 109) chain A residue 138 type BINDING sequence R description BINDING => ECO:0000255|HAMAP-Rule:MF_01201 source Swiss-Prot : SWS_FT_FI3 110) chain B residue 138 type BINDING sequence R description BINDING => ECO:0000255|HAMAP-Rule:MF_01201 source Swiss-Prot : SWS_FT_FI3 111) chain A residue 312 type BINDING sequence M description BINDING => ECO:0000305 source Swiss-Prot : SWS_FT_FI4 112) chain B residue 312 type BINDING sequence M description BINDING => ECO:0000305 source Swiss-Prot : SWS_FT_FI4

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