eF-site ID 6g58-A
PDB Code 6g58
Chain A

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Title Structure of the alanine racemase from Staphylococcus aureus in complex with a pyridoxal 5' phosphate-derivative
Classification BIOSYNTHETIC PROTEIN
Compound Alanine racemase 1
Source (ALR1_STAAM)
Sequence A:  FSDKYYRSAYMNVDLNAVASNFKVFSTLHPNKTVMAVVKA
NAYGLGSVKVARHLMENGATFFAVATLDEAIELRMHGITA
KILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISG
EQEKKLWLHIKLDTGMGRLGIKDTNTYQEVIEIIQQYEQL
VFEGVFTHFACADEPGDMTTEQYQRFKDMVNEAIKPEYIH
CQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVH
LKPSVQLIANVVQTKTLQAGESVSYGATYTATDPTTIALL
PIGYADGYLRIMQGSFVNVNGHQCEVIGRVCMDQTIVKVP
DQVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVLCNL
SRRLPRIYHDGDQRFVTNELLK
Description


Functional site

1) chain A
residue 39
type
sequence K
description binding site for residue EOW A 401
source : AC1

2) chain A
residue 43
type
sequence Y
description binding site for residue EOW A 401
source : AC1

3) chain A
residue 85
type
sequence L
description binding site for residue EOW A 401
source : AC1

4) chain A
residue 131
type
sequence K
description binding site for residue EOW A 401
source : AC1

5) chain A
residue 138
type
sequence R
description binding site for residue EOW A 401
source : AC1

6) chain A
residue 168
type
sequence H
description binding site for residue EOW A 401
source : AC1

7) chain A
residue 203
type
sequence N
description binding site for residue EOW A 401
source : AC1

8) chain A
residue 204
type
sequence S
description binding site for residue EOW A 401
source : AC1

9) chain A
residue 219
type
sequence R
description binding site for residue EOW A 401
source : AC1

10) chain A
residue 221
type
sequence G
description binding site for residue EOW A 401
source : AC1

11) chain A
residue 222
type
sequence I
description binding site for residue EOW A 401
source : AC1

12) chain A
residue 354
type
sequence Y
description binding site for residue EOW A 401
source : AC1

13) chain A
residue 359
type
sequence N
description binding site for residue NA A 402
source : AC2

14) chain A
residue 154
type
sequence I
description binding site for residue NA A 403
source : AC3

15) chain A
residue 157
type
sequence Y
description binding site for residue NA A 403
source : AC3

16) chain A
residue 160
type
sequence L
description binding site for residue NA A 403
source : AC3

17) chain A
residue 284
type
sequence Y
description binding site for residue NA A 404
source : AC4

18) chain A
residue 290
type
sequence R
description binding site for residue MPD A 405
source : AC5

19) chain A
residue 309
type
sequence R
description binding site for residue MPD A 405
source : AC5

20) chain A
residue 209
type
sequence L
description binding site for residue MPD A 406
source : AC6

21) chain A
residue 210
type
sequence M
description binding site for residue MPD A 406
source : AC6

22) chain A
residue 79
type
sequence T
description binding site for residue MPD A 407
source : AC7

23) chain A
residue 100
type
sequence R
description binding site for residue MPD A 407
source : AC7

24) chain A
residue 265
type
sequence Y
description binding site for residue ACT A 408
source : AC8

25) chain A
residue 284
type
sequence Y
description binding site for residue ACT A 408
source : AC8

26) chain A
residue 311
type
sequence C
description binding site for residue ACT A 408
source : AC8

27) chain A
residue 312
type
sequence M
description binding site for residue ACT A 408
source : AC8

28) chain A
residue 8
type
sequence S
description binding site for residue ACT A 409
source : AC9

29) chain A
residue 251
type
sequence V
description binding site for residue ACT A 409
source : AC9

30) chain A
residue 326
type
sequence G
description binding site for residue ACT A 409
source : AC9

31) chain A
residue 31
type
sequence N
description binding site for residue ACT A 410
source : AD1

32) chain A
residue 32
type
sequence K
description binding site for residue ACT A 410
source : AD1

33) chain A
residue 213
type
sequence Q
description binding site for residue ACT A 410
source : AD1

34) chain A
residue 215
type
sequence C
description binding site for residue ACT A 410
source : AD1

35) chain A
residue 236
type
sequence K
description binding site for residue ACT A 411
source : AD2

36) chain A
residue 5
type
sequence Y
description binding site for residue ACT A 412
source : AD3

37) chain A
residue 10
type
sequence Y
description binding site for residue ACT A 412
source : AD3

38) chain A
residue 367
type
sequence I
description binding site for residue ACT A 412
source : AD3

39) chain A
residue 374
type
sequence R
description binding site for residue ACT A 412
source : AD3

40) chain A
residue 5
type
sequence Y
description binding site for residue MPD B 407
source : AD9

41) chain A
residue 6
type
sequence Y
description binding site for residue MPD B 407
source : AD9

42) chain A
residue 8
type
sequence S
description binding site for residue MPD B 407
source : AD9

43) chain A
residue 258
type
sequence Q
description binding site for residue MPD B 408
source : AE1

44) chain A
residue 39
type
sequence K
description binding site for residue ACT B 412
source : AE5

45) chain A
residue 252
type
sequence V
description binding site for residue GOL B 413
source : AE6

46) chain A
residue 281
type
sequence P
description binding site for residue GOL B 413
source : AE6

47) chain A
residue 314
type
sequence Q
description binding site for residue GOL B 413
source : AE6

48) chain A
residue 312
type
sequence M
description binding site for Di-peptide EOW B 401 and LYS B 39
source : AE7

49) chain A
residue 313
type
sequence D
description binding site for Di-peptide EOW B 401 and LYS B 39
source : AE7

50) chain A
residue 39
type MOD_RES
sequence K
description N6-(pyridoxal phosphate)lysine
source Swiss-Prot : SWS_FT_FI5

51) chain A
residue 138
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_01201
source Swiss-Prot : SWS_FT_FI3

52) chain A
residue 39
type ACT_SITE
sequence K
description Proton acceptor; specific for D-alanine => ECO:0000305|PubMed:22194336
source Swiss-Prot : SWS_FT_FI1

53) chain A
residue 265
type ACT_SITE
sequence Y
description Proton acceptor; specific for L-alanine => ECO:0000305|PubMed:22194336
source Swiss-Prot : SWS_FT_FI2

54) chain A
residue 312
type BINDING
sequence M
description BINDING => ECO:0000305
source Swiss-Prot : SWS_FT_FI4

55) chain A
residue 36-46
type prosite
sequence AVVKANAYGLG
description ALANINE_RACEMASE Alanine racemase pyridoxal-phosphate attachment site. AVvKANAYGLG
source prosite : PS00395


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