eF-site ID 6fyy-A
PDB Code 6fyy
Chain A

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Title Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2)
Classification RIBOSOME
Compound tRNAi
Source ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae; ORGANISM_COMMON: Yeast;
Sequence A:  SLPSTFDLTSEDAQLLLAARVHLGAKNVQVHQEPYVYKAR
PDGVNVINVGKTWEKIVLAARIIAAIPNPEDVVAISSRTY
GQRAVLKYAAHTGATPIAGRFTPGSFTNYITRSFKEPRLV
IVTDPRSDAQAIKESSYVNIPVIALTDLDSPSEYVDVAIP
CNNRGKHSIGLIWYLLAREVLRLRGALPDRTQPWAIMPDL
YFYRNPEEIEQQTAEEEAV
Description (1)  30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, 30S ribosomal protein S5, 30S ribosomal protein S6, 30S ribosomal protein S7, 30S ribosomal protein S8, 30S ribosomal protein S9, 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, 30S ribosomal protein S13, 30S ribosomal protein S14 type Z, 30S ribosomal protein S15, 30S ribosomal protein S16, 30S ribosomal protein S17, 30S ribosomal protein S18, 30S ribosomal protein S19, 30S ribosomal protein S20, 30S ribosomal protein Thx, Translation initiation factor IF-1, Translation initiation factor IF-3/RNA Complex


Functional site

1) chain A
residue 14-25
type prosite
sequence AQLLLAARVHLG
description RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. AqLLLAARVHLG
source prosite : PS00962

2) chain A
residue 118-142
type prosite
sequence PRLVIVTDPRSDAQAIKESSYVNIP
description RIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PrlVIVtDprsDaqaIkEssyvNIP
source prosite : PS00963


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