eF-site ID
|
6fyx-ACDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmopqrs |
PDB Code
|
6fyx |
Chain
|
A, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, a, b, c, d, e, f, g, h, i, j, k, l, m, o, p, q, r, s |
|
|
|
Title
|
Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C1) |
Classification
|
RIBOSOME |
Compound
|
tRNAi |
Source
|
ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae; ORGANISM_COMMON: Yeast; |
|
Sequence
|
A: |
SLPSTFDLTSEDAQLLLAARVHLGAKNVQVHQEPYVYKAR
PDGVNVINVGKTWEKIVLAARIIAAIPNPEDVVAISSRTY
GQRAVLKYAAHTGATPIAGRFTPGSFTNYITRSFKEPRLV
IVTDPRSDAQAIKESSYVNIPVIALTDLDSPSEYVDVAIP
CNNRGKHSIGLIWYLLAREVLRLRGALPDRTQPWAIMPDL
YFYRNPEEIEQQTAEEEAV
|
C: |
EEKGWVPVTKLGRLVKAGKISSIEEIFLHSLPVKEFQIID
QLLPNLKDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGH
VGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLGQ
PHSLATKTSGKCGSVSVRLIPAPRGSGIVASPAVKKLMQL
AGVEDVYTSSTGSTRTLENTLKAAFVAIGNTYGFLTPNLW
EVQALTPSPMDVYADYATAS
|
D: |
AIISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVT
PTKTEIIIRATKVQDVVGENGRRINELTLLIEKRFKYKRG
TIALYAERVHDRGLSAVAQAESMKFKLLNGLAIRRAAYGV
VRYVMESGAKGCEVVISGKLRAARAKSMKFADGFLIHSGQ
PVNDFIETATRHVLLRQGVLGIKVKIMKDPSRNTSGPKAL
PDAVTIIEPKEEEPVLEPSVKDYRPTE
|
E: |
ARGPKKHLKRLAAPHHWMLDKLSGCYAPRPSAGPHKLRES
LPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRTDTT
FPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASY
KLAKVKKVQLGKKGIPYVVTHDGRTIRYPDPNIKVNDTVK
VDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTIVHRERH
EGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLPKG
KGIKLTISEERDRRRAQHGL
|
F: |
FVPVELATTIPVEIQQAQQEIKLFNKWSFEDVEVKDASLV
DYIQISKPIYVAHTAGRYANKRFRKAQCPIVERLTNSLMM
NGRNNGKKLKAVRIVKHTLEIINVLTDQNPLQVVVDAIIN
SGPREDTTRVGGGGAARRQAVDVSPLRRVNQSIALLTIGA
REAAFRNIKTIAETLAEELINAAKGSSTSYAIKKKDELER
VAKSNR
|
G: |
MKLNISYPINGTQKCIEIDDEHRVRVFYDKRIGQEVDGES
VGDEFKGYVFKIAGGNDKQGFPMKQGVLLPTRVKLLLAKG
HSCYRPRRNGERKRKSVRGAIVGPDLAVLALIITKKGEQE
IEGITNDTVPKRLGPKRANNIRKFFGLTKEDDVRDYVIRR
EVTKGDKSYTKAPKIQRLVTPQRLQRKRQQKSLKIKNAQA
QREAAAEYAQLLAKRLSERKAEKAEVRKRR
|
H: |
PQAKILSQAPTELELQVAQAFIDLENNSPELKADLRALQF
KSIREIEVAGGKKALAVFVPVPSLAAYHKVQIKLTRELEK
KFQDRHVIFLAERRILPKPSRKSRQTQKRPRSRTLTAVHD
KILEDLVFPTEIVGKRVRYLVGGNKIQKILLNSKDVQHID
NKLESFQAVYNKLTGKQIVFEIPS
|
I: |
GISRDSRHKRAATGAKRAQFRKKRKFELGRQAANTKIGTK
RIHPVRTRGGNQKFRALRIETGNFSWASEGVARKTRITGV
VYHPSNNELVRTNTLTKAAIVQIDATPFRQWYESHYGQSL
GKTSKNTERKWAARAAEAKIEHAVDSQFGAGRLYAAISSR
PGQSGRCDGYILEGEELAFYLRRLTAKK
|
J: |
PRAPRTYSKTYSTPKRPYESARLDAELKLAGEYGLKNKRE
IYRISFQLSKIRRAARDLLTRDEKDPKRLFEGNALIRRLV
RIGVLSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAKS
VHHARVLISQRHIAVGKQIVNIPSFMVRLESEKHIDFART
SPFGGARPGRVARKRAAAAGGE
|
K: |
MLIPKEDRKKIYQHLFQEGVLVAKKDFNQPKHEEIDTKNL
FVIKALQSLTSKGFVKTQFSWQYYYYTLTEEGVVYLREYL
NLPEHIFPATYLAGQS
|
L: |
STELTVQSERAFQKQPHIFTNPKAKANRKTKRWYKNVGLG
FKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTRMH
RTIVIRRDYLHYVPKYNRYEKRHKNVPAHVSPAFRVQVGD
IVTVGQCRPISKTVRFNVLKVASATGKANKQFAKF
|
M: |
IEDALKVVLRTSLVHDGLARGLRESAKALTRGEGQLAVLV
ESVTEEAISKLVQGLATENVPLIKVADAKQLGEWAGLGKI
DRDGNARKVVGASVVVVKNWGADTQEREILLEHFSQQ
|
N: |
MGRMHSKGKGMSSSAIPYSRNAPAWFKGSSDGVVEQIIKY
ARKGLTPSQIGVLLRDAHGVTQAKVITGNKILRILKSNGL
APEIPEDLYFLIKKAVSVRKHLERNRKDKDAKFRLILIES
RIHRLARYYRTVSVLPPNWKYESATASALVN
|
O: |
DNSQVFGVARIFASFNDTFVHVTDLSGRETIARVTGGMKV
KADRDESSPYAAMLAAQDVAAKCKEVGITAVHIKIRATGG
TRSKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDSTRK
KGGRRGRRL
|
P: |
KTYSYKGVDLEKLLEMPTEDFVKLAPARVRRKFARGLSEK
PAGLMKKLRAAKLSAPENEKPAVVRTHLRNMIIVPEMIGS
VVGVYNGKVFNQVEIRPEMVGHYLGEFSITYTPVRHG
|
Q: |
TVPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVQPE
ILRFKVYEPLLLVGLDKFANIDIRVKVTGGGHVSQVYAIR
QAIAKGLVAYHQKFVDEQSKNELKKAFTSYDRTLLIADSR
RPEPKKFGGRGARSRFQKSYR
|
R: |
GRVRTKTVKRASKALIEKYYPKLTMDFQTNKRLCDEIATI
QSKRLRNKIAGYTTHLMKRIQKGPVRGISFKLQEEERERK
DQYVPDVSALDLSHSNDVLNVDTQTAELVNSLGLKLPLSV
SSVSAVRDRR
|
S: |
SLVVQEQGSFQHILRLLNTNVDGNINVVYALTTIRGVGRR
YANLVCKKADVDLHKRAGELTQEELERIVQIMQNPTHYKI
PAWFLNRQKDVNDGKDYHSLANNLESKLRDDLERLKKIRS
HRGIRHFWGLRVRGQHTKTTGRRRA
|
T: |
PGVSVRDVPAQDFINNYASFLQRQGKLEVPGYVDIVKTSA
GNELPPQDSEGWFYKRAASVARHIYLRKQVGVGKLNKLYG
GAKNRGVRPHKHVDASGSINRKVLQSLEKLGVVEISPKGG
RRISDNGLRDLDRIAAATLEDEE
|
U: |
QEVVIHKIRINLTSTKVKQLENVSANIIKNAETFKLVKKG
PVRLPTKVLKISTRKTPNGEGSKTWDTYEMRIHKRYIDLE
APAHIVKRITQITIEPGVDVEVIIAA
|
V: |
MENDKGQLVELYVPRKCSATNRIIKAKDHSSVQINIAQVD
EEGRAIPGEYVTYALSGYIRARGEADDSLNRLAQQDGLLK
NVWSYSR
|
W: |
TRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVM
QKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGVISPRFNV
KIADVEKWTANLLPARQFGYVILTTSAGIMDHEEAHRKHV
SGKILGFVY
|
X: |
GKGKPRGLNSARKLRVHRRNNRWAETTYKKRLLGTAFKSS
PFGGSSHAKGIVLEKIGIESKQPNSAIRKCVRVQLIKNGK
KVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVR
FKVVKVSGVSLLALWKEKKEKPRS
|
Y: |
SDAITIRTRKVISNPLLARKQFVVDVLHPNRANVSKDELR
EKLAEAYKAEKDAVSVFGFRTQYGGGKSTGFGLVYNSVAD
AKKFEPAYRLVRYGLAEKVEKASRQQRKQRKNRGKKIFGT
GKSIAKKAARRNAD
|
Z: |
SKKSHKDKAKHAVVLDQDKFDRIMKEAPTYRYVSVSVLVD
RFKLGGSLARVALRHLENEGIIKPVSKHSKQAIYTRAT
|
a: |
PKKRASNGRNKKGRGHVKPVRCVNCSRSVPKDKAIKRMAI
RNIVEAAAIRDLSEASVYAEYALPKTYNKLHYCISCAIHA
RIVRVRSRTDRRIRAPPQRPRFN
|
b: |
VLVQDLLHPTAASEARKHKLKTLVQSPRSHFLDVKCPGCL
NITTVFSHAQTAVTCESCSTVLCTPTGGKAKLSEGTSFRR
K
|
c: |
KTPVTLAKVIKVLGRTGSRGGVTQVRVEFLEDTTRTIVRN
VKGPVREGDILVLMESEREARRLR
|
d: |
AHENVWYSHPRKFGKGSRQCRISGSHSGLIRKYGLNIDRQ
SFREKANDIGFYKYR
|
e: |
GKVHGSLARAGKVKSQTPKVEKQEKPKQPKGRAYKRLLYT
RRFVNVTLTNGKRKMNPSPS
|
f: |
GKKRKKKVYTTPKKIRHKHKKVKLAVLNYYKVDDEGKVAK
LRKECPNCGPGIFLANHGDRFYCGKCHSTFATQK
|
g: |
SSNIMLVLRGTLEGHNGWVTSLSTSAAQPNLLVSGSRDKT
LISWRLTENEQQFGVPVRSYKGHSHIVQDVVVSADGNYAV
SASWDKTLRLWNLATGNSEARFVGHTGDVLSVAIDANSSK
IISASRDKTIRVWNTVGDCAYVLLGHTDWVTKVRVAPKNL
EDVDDGRITFVSAGMDKIVRSWSLNSYRIEADFIGHNNYI
NVVQPSPDGSLAASAGKDGQIYVWNLKHKSAFMNFDAKDE
VFALAFSPSRFWLTAATASGIKIYDLENEVLIDELKPEFA
GYTKAQDPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTAN
|
h: |
MRAKWRKKRTRRLKRKRRKVRARSK
|
i: |
GKKNTKGGKKGRRGKNDSDGPKRELIYKEEGQEYAQITKM
LGNGRVEASCFDGNKRMAHIRGKLRKKVWMGQGDIILVSL
RDFQDDQCDVVHKYNLDEARTLKNQGELPENAKINETDNF
G
|
j: |
TSHCRFYENKYPEIDDIVMVNVQQIAEMGAYVKLLEYDNI
EGMILLSELSRRRIRSIQKLIRVGKNDVAVVLRVDKEKGY
IDLSKRRVSSEDIIKCEEKYQKSKTVHSILRYCAEKFQIP
LEELYKTIAWPLSRKFGHAYEAFKLSIIDETVWEGIEPPS
KDVLDELKNYISVKIRADVEVSCFSYEGIDAIKDALKSAE
DVKVKLVAAPLYVLTTQALDKQKGIEQLESAIEKITEVIT
KYGGVCNIT
|
k: |
LSAEIINRQATINIGTIGHVAHGKSTVVRAISGVQTVRFK
DELERNITIKLGYANAKIYKCQEFKSDKEISPKCQRPGCP
GRYKLVRHVSFVDCPGHDILMSTMLSGAAVMDAALLLIAG
NESCPQPQTSEHLAAIEIMKLKHVIILQNKVDLMREESAL
EHQKSILKFIRGTIADGAPIVPISAQLKYNIDAVNEFIVK
TIPVPPRDFMISPRLIVIRSFDVNKPGAEIEDLKGGVAGG
SILNGVFKLGDEIEIRPGIVTDDKGKIQCKPIFSNIVSLF
AEQNDLKFAVPGGLIGVGTKVDPTLCRADRLVGQVVGAKG
HLPNIYTDIEINYFLLRRLLGVKKQAKVRKLEPNEVLMVN
IGSTATGARVVAVKADMARLQLTSPACTEINEKIALSRRI
EKHWRLIGWATIKK
|
l: |
VGLPYSELLSRFFNILRKFRIPPPVCLRDGKKTIFSNIQD
IAEKLHRSPEHLIQYLFAELGTSGSVDGKRLVIKGKFQSK
QMENVLRRYILEYVTCKTCKSINTELKRENRLFFMVCKSC
GSTRSVSS
|
m: |
INICRDNHDPFYRYKMPPIQAKVEGRGNGIKTAVLNVADI
SHALNRPAPYIVKYFGFELGAQTSISVDKDRYLVNGVHEP
AKLQDVLDGFINKFVLCGSCKNPETEIIITKDNDLVRDCK
ACGKRTPMDLRHKLSSFILKNPPDSVS
|
o: |
FRPENAIKRADELISVGEKQAALQSLHDFITARRIRWATP
STVEPVVFKFLEIGVELKKGKLLKDGLHQYKKLIQGSTEG
LVSVGAVARKFIDLVESKIASEQTRADELQKQEIDAITSW
LRFTWESYRAVLDLLRNNALLEITYSGVVKKTMHFCLKYQ
RKNEFKRLAEMLRQHLDAANYQQSDADTLQRYLDQRFQQV
DVSVKLELWHEAYRSIEDVFHLMKISKRAPKPSTLANYYE
NLVKVFFVSGDPLLHTTAWKKFYKLYSTNPRATEEEFKTY
SSTIFLSAISTQLDEIPSIGYDPHLRMYRLLNLDAKPTRK
EMLQSIIEDESIYGKVDEELKELYDIIEVNFDVDTVKQQL
ENLLVKLSSKTYFSQYIAPLRDVIMRRVFVAASQKFTTVS
QSELYKLATLPAPLDLSAWDIEKSLLQAAVEDYVSITIDH
ESAKVTFAKDPAAKKARIEEVRKRRYEEAIARRKEEIANA
ERQKRAQELAEATRKQREIEEAAAKKSAGRTAGGSSPATP
ATPATPATP
|
p: |
EFNFDQYIVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVN
MEFPIDEATGKTKGFLFVECGSMNDAKKIIKSFHGKRLDL
KHRLFLYTMKDVERYNSPSSSLKSWLMDDKVRDQFVLQDD
VKTSVFWNSMFNEEDSLVESRENWSTNYVRFSPKGTYLFS
YHQQGVTAWGGPNFDRLRRFYHPDVRNSSVSPNEKYLVTF
STEPIIVEEDNEFSPFTKKNEGHQLCIWDIASGLLMATFP
VIKSPYLKWPLVRWSYNDKYCARMVGDSLIVHDATKNFMP
LEAKALKPSGIRDFSFAPEGVKLQPFRNGDEPSVLLAYWT
PETNNSACTATIAEVPRGRVLKTVNLVQVSNVTLHWQNQA
EFLCFNVERHTKSGKTQFSNLQICRLTERDIPVEKVELKD
SVFEFGWEPHGNRFVTISVHEVADMNYAIPANTIRFYAPE
TKEKTDVIKRWSLVKEIPKTFANTVSWSPAGRFVVVGALV
GPNMRRSDLQFYDMDYPGEKNINDNNDVSASLKDVAHPTY
SAATNITWDPSGRYVTAWSSSLKHKVEHGYKIFNIAGNLV
KEDIIAGFKNFAWRPRPSILSNAERKKVRKNLREWSAQFE
EQDAMEADTAMRDLHQRELLKQWTEYREKIGQEMEKSMNF
KIFDVQP
|
q: |
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQED
FFTRLQTIIDSRGKKTVNQQSLISTLEELLTVAEKPYEFI
MAYLTLIPSRFDASANLSYQPIDQWKSSFNDISKLLSILD
QTIDTYQVNEFADPIDFIEDEPKEDSDGVKRILGSIFSFV
ERLDDEFMKSLLNIDPHSSDYLIRLRDEQSIYNLILRTQL
YFEATLKDEHDLERALTRPFVKRLDHIYYKSENLIKIMET
AAWNIIPAQFKSKFTSKDQLDSADYVDNLIDGLSTILSKQ
NNIAVQKRAILYNIYYTALNKDFQTAKDMLLTSQVQTNIN
QFDSSLQILFNRVVVQLGLSAFKLCLIEECHQILNDLLSS
SHLREILGQQSLHRISLNSSNNASADERARQCLPYHQHIN
LDLIDVVFLTCSLLIEIPRMTAFYSGIKVKRIPYSPKSIR
RSLEHYDKLSFQGPPETLRDYVLFAAKSMQKGNWRDSVKY
LREIKSWALLPNMETVLNSLTERVQVESLKTYFFSFKRFY
SSFSVAKLAELFDLPENKVVEVLQSVIAELEIPAKLNDEK
TIFVVEKGDEITKLEEAMVKL
|
r: |
SVAERKNWHKYGSEKGSPAGPSAVTARLGEEVELRLSRNW
KQAEEERIQ
|
s: |
MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSL
NGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWD
VSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPG
SINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAG
WSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSIS
DMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPL
NTAVITPLKEFIILGGGQGKFEARFYHKIFEEEIGRVQGH
FGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFDFKYD
VEKAAEAKEH
|
|
Description
|
|
|
|
1)
|
chain |
G |
residue |
88 |
type |
|
sequence |
R
|
description |
binding site for residue MG 2 1846
|
source |
: AG5
|
|
2)
|
chain |
G |
residue |
91 |
type |
|
sequence |
E
|
description |
binding site for residue MG 2 1846
|
source |
: AG5
|
|
3)
|
chain |
T |
residue |
44 |
type |
|
sequence |
E
|
description |
binding site for residue MG 2 1859
|
source |
: AH9
|
|
4)
|
chain |
i |
residue |
13 |
type |
|
sequence |
R
|
description |
binding site for residue MG 2 1879
|
source |
: AJ5
|
|
5)
|
chain |
Q |
residue |
142 |
type |
|
sequence |
Y
|
description |
binding site for residue MG 2 1884
|
source |
: AJ9
|
|
6)
|
chain |
T |
residue |
79 |
type |
|
sequence |
L
|
description |
binding site for residue MG 2 1890
|
source |
: AK5
|
|
7)
|
chain |
m |
residue |
30 |
type |
|
sequence |
N
|
description |
binding site for residue MG 2 1893
|
source |
: AK8
|
|
8)
|
chain |
a |
residue |
9 |
type |
|
sequence |
G
|
description |
binding site for residue MG 2 1897
|
source |
: AK9
|
|
9)
|
chain |
a |
residue |
34 |
type |
|
sequence |
K
|
description |
binding site for residue MG 2 1897
|
source |
: AK9
|
|
10)
|
chain |
X |
residue |
60 |
type |
|
sequence |
E
|
description |
binding site for residue MG 2 1898
|
source |
: AL1
|
|
11)
|
chain |
X |
residue |
68 |
type |
|
sequence |
I
|
description |
binding site for residue MG 2 1898
|
source |
: AL1
|
|
12)
|
chain |
i |
residue |
62 |
type |
|
sequence |
R
|
description |
binding site for residue MG 2 1898
|
source |
: AL1
|
|
13)
|
chain |
a |
residue |
23 |
type |
|
sequence |
C
|
description |
binding site for residue ZN a 500
|
source |
: AN2
|
|
14)
|
chain |
a |
residue |
26 |
type |
|
sequence |
C
|
description |
binding site for residue ZN a 500
|
source |
: AN2
|
|
15)
|
chain |
a |
residue |
74 |
type |
|
sequence |
C
|
description |
binding site for residue ZN a 500
|
source |
: AN2
|
|
16)
|
chain |
a |
residue |
77 |
type |
|
sequence |
C
|
description |
binding site for residue ZN a 500
|
source |
: AN2
|
|
17)
|
chain |
b |
residue |
56 |
type |
|
sequence |
C
|
description |
binding site for residue ZN b 101
|
source |
: AN3
|
|
18)
|
chain |
b |
residue |
59 |
type |
|
sequence |
C
|
description |
binding site for residue ZN b 101
|
source |
: AN3
|
|
19)
|
chain |
b |
residue |
61 |
type |
|
sequence |
T
|
description |
binding site for residue ZN b 101
|
source |
: AN3
|
|
20)
|
chain |
b |
residue |
62 |
type |
|
sequence |
V
|
description |
binding site for residue ZN b 101
|
source |
: AN3
|
|
21)
|
chain |
f |
residue |
121 |
type |
|
sequence |
C
|
description |
binding site for residue ZN f 501
|
source |
: AN4
|
|
22)
|
chain |
f |
residue |
124 |
type |
|
sequence |
C
|
description |
binding site for residue ZN f 501
|
source |
: AN4
|
|
23)
|
chain |
f |
residue |
139 |
type |
|
sequence |
C
|
description |
binding site for residue ZN f 501
|
source |
: AN4
|
|
24)
|
chain |
f |
residue |
141 |
type |
|
sequence |
K
|
description |
binding site for residue ZN f 501
|
source |
: AN4
|
|
25)
|
chain |
f |
residue |
142 |
type |
|
sequence |
C
|
description |
binding site for residue ZN f 501
|
source |
: AN4
|
|
26)
|
chain |
k |
residue |
142 |
type |
|
sequence |
Y
|
description |
binding site for residue MET k 601
|
source |
: AN5
|
|
27)
|
chain |
k |
residue |
144 |
type |
|
sequence |
N
|
description |
binding site for residue MET k 601
|
source |
: AN5
|
|
28)
|
chain |
k |
residue |
381 |
type |
|
sequence |
F
|
description |
binding site for residue MET k 601
|
source |
: AN5
|
|
29)
|
chain |
k |
residue |
382 |
type |
|
sequence |
A
|
description |
binding site for residue MET k 601
|
source |
: AN5
|
|
30)
|
chain |
k |
residue |
383 |
type |
|
sequence |
E
|
description |
binding site for residue MET k 601
|
source |
: AN5
|
|
31)
|
chain |
k |
residue |
395 |
type |
|
sequence |
L
|
description |
binding site for residue MET k 601
|
source |
: AN5
|
|
32)
|
chain |
k |
residue |
114 |
type |
|
sequence |
S
|
description |
binding site for residue MG k 602
|
source |
: AN6
|
|
33)
|
chain |
k |
residue |
137 |
type |
|
sequence |
T
|
description |
binding site for residue MG k 602
|
source |
: AN6
|
|
34)
|
chain |
k |
residue |
193 |
type |
|
sequence |
D
|
description |
binding site for residue MG k 602
|
source |
: AN6
|
|
35)
|
chain |
k |
residue |
108 |
type |
|
sequence |
H
|
description |
binding site for residue GCP k 603
|
source |
: AN7
|
|
36)
|
chain |
k |
residue |
109 |
type |
|
sequence |
V
|
description |
binding site for residue GCP k 603
|
source |
: AN7
|
|
37)
|
chain |
k |
residue |
111 |
type |
|
sequence |
H
|
description |
binding site for residue GCP k 603
|
source |
: AN7
|
|
38)
|
chain |
k |
residue |
112 |
type |
|
sequence |
G
|
description |
binding site for residue GCP k 603
|
source |
: AN7
|
|
39)
|
chain |
k |
residue |
113 |
type |
|
sequence |
K
|
description |
binding site for residue GCP k 603
|
source |
: AN7
|
|
40)
|
chain |
k |
residue |
114 |
type |
|
sequence |
S
|
description |
binding site for residue GCP k 603
|
source |
: AN7
|
|
41)
|
chain |
k |
residue |
115 |
type |
|
sequence |
T
|
description |
binding site for residue GCP k 603
|
source |
: AN7
|
|
42)
|
chain |
k |
residue |
127 |
type |
|
sequence |
R
|
description |
binding site for residue GCP k 603
|
source |
: AN7
|
|
43)
|
chain |
k |
residue |
135 |
type |
|
sequence |
N
|
description |
binding site for residue GCP k 603
|
source |
: AN7
|
|
44)
|
chain |
k |
residue |
136 |
type |
|
sequence |
I
|
description |
binding site for residue GCP k 603
|
source |
: AN7
|
|
45)
|
chain |
k |
residue |
196 |
type |
|
sequence |
G
|
description |
binding site for residue GCP k 603
|
source |
: AN7
|
|
46)
|
chain |
k |
residue |
249 |
type |
|
sequence |
N
|
description |
binding site for residue GCP k 603
|
source |
: AN7
|
|
47)
|
chain |
k |
residue |
250 |
type |
|
sequence |
K
|
description |
binding site for residue GCP k 603
|
source |
: AN7
|
|
48)
|
chain |
k |
residue |
285 |
type |
|
sequence |
A
|
description |
binding site for residue GCP k 603
|
source |
: AN7
|
|
49)
|
chain |
k |
residue |
286 |
type |
|
sequence |
Q
|
description |
binding site for residue GCP k 603
|
source |
: AN7
|
|
50)
|
chain |
l |
residue |
238 |
type |
|
sequence |
T
|
description |
binding site for residue GCP k 603
|
source |
: AN7
|
|
51)
|
chain |
l |
residue |
264 |
type |
|
sequence |
S
|
description |
binding site for residue GCP k 603
|
source |
: AN7
|
|
52)
|
chain |
l |
residue |
236 |
type |
|
sequence |
C
|
description |
binding site for residue ZN l 301
|
source |
: AN8
|
|
53)
|
chain |
l |
residue |
238 |
type |
|
sequence |
T
|
description |
binding site for residue ZN l 301
|
source |
: AN8
|
|
54)
|
chain |
l |
residue |
264 |
type |
|
sequence |
S
|
description |
binding site for residue ZN l 301
|
source |
: AN8
|
|
55)
|
chain |
m |
residue |
99 |
type |
|
sequence |
C
|
description |
binding site for residue ZN m 501
|
source |
: AN9
|
|
56)
|
chain |
m |
residue |
121 |
type |
|
sequence |
C
|
description |
binding site for residue ZN m 501
|
source |
: AN9
|
|
57)
|
chain |
m |
residue |
126 |
type |
|
sequence |
K
|
description |
binding site for residue ZN m 501
|
source |
: AN9
|
|
58)
|
chain |
m |
residue |
128 |
type |
|
sequence |
T
|
description |
binding site for residue ZN m 501
|
source |
: AN9
|
|
59)
|
chain |
s |
residue |
302 |
type |
MOD_RES |
sequence |
S
|
description |
Phosphoserine => ECO:0007744|PubMed:18407956
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
60)
|
chain |
k |
residue |
249 |
type |
MOD_RES |
sequence |
N
|
description |
Phosphoserine => ECO:0007744|PubMed:18407956
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
61)
|
chain |
k |
residue |
284 |
type |
MOD_RES |
sequence |
S
|
description |
Phosphoserine => ECO:0007744|PubMed:18407956
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
62)
|
chain |
p |
residue |
669 |
type |
MOD_RES |
sequence |
S
|
description |
Phosphoserine => ECO:0007744|PubMed:18407956
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
63)
|
chain |
J |
residue |
105-129 |
type |
prosite |
sequence |
LERRLQTQVYKLGLAKSVHHARVLI
|
description |
RIBOSOMAL_S4 Ribosomal protein S4 signature. LErRLqtqVYKlglAkSvhhARvLI
|
source |
prosite : PS00632
|
|
64)
|
chain |
G |
residue |
52-63 |
type |
prosite |
sequence |
IAGGNDKQGFPM
|
description |
RIBOSOMAL_S6E Ribosomal protein S6e signature. IAGGnDkqGfPM
|
source |
prosite : PS00578
|
|
65)
|
chain |
E |
residue |
8-22 |
type |
prosite |
sequence |
HLKRLAAPHHWMLDK
|
description |
RIBOSOMAL_S4E Ribosomal protein S4e signature. HlKRLAaPhhWmLdK
|
source |
prosite : PS00528
|
|
66)
|
chain |
Q |
residue |
71-89 |
type |
prosite |
sequence |
GGGHVSQVYAIRQAIAKGL
|
description |
RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGhvSQvyAirqAiAKGL
|
source |
prosite : PS00360
|
|
67)
|
chain |
R |
residue |
41-56 |
type |
prosite |
sequence |
IQSKRLRNKIAGYTTH
|
description |
RIBOSOMAL_S17E Ribosomal protein S17e signature. IqSKrLRNkIAGYtTH
|
source |
prosite : PS00712
|
|
68)
|
chain |
V |
residue |
11-19 |
type |
prosite |
sequence |
LYVPRKCSA
|
description |
RIBOSOMAL_S21E Ribosomal protein S21e signature. LYVPRKCSA
|
source |
prosite : PS00996
|
|
69)
|
chain |
a |
residue |
73-80 |
type |
prosite |
sequence |
YCISCAIH
|
description |
RIBOSOMAL_S26E Ribosomal protein S26e signature. YCISCAIH
|
source |
prosite : PS00733
|
|
70)
|
chain |
Y |
residue |
64-86 |
type |
prosite |
sequence |
YGGGKSTGFGLVYNSVADAKKFE
|
description |
RIBOSOMAL_S24E Ribosomal protein S24e signature. YGggKStGFGlVYNSvadakkfE
|
source |
prosite : PS00529
|
|
71)
|
chain |
D |
residue |
147-183 |
type |
prosite |
sequence |
AKSMKFADGFLIHSGQPVNDFIETATRHVLLRQGVLG
|
description |
RIBOSOMAL_S3 Ribosomal protein S3 signature. AKsmkfadGfLihSgqpVndfIEtatrhvlLrqGvlG
|
source |
prosite : PS00548
|
|
72)
|
chain |
M |
residue |
20-38 |
type |
prosite |
sequence |
ALKVVLRTSLVHDGLARGL
|
description |
RIBOSOMAL_S12E Ribosomal protein S12e signature. ALKvvLrtSlvhDGLarGL
|
source |
prosite : PS01189
|
|
73)
|
chain |
b |
residue |
36-68 |
type |
prosite |
sequence |
KCPGCLNITTVFSHAQTAVTCESCSTVLCTPTG
|
description |
RIBOSOMAL_S27E Ribosomal protein S27e signature. KCpgClnittvFShAqtavtCesCStvLctPtG
|
source |
prosite : PS01168
|
|
74)
|
chain |
A |
residue |
14-25 |
type |
prosite |
sequence |
AQLLLAARVHLG
|
description |
RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. AqLLLAARVHLG
|
source |
prosite : PS00962
|
|
75)
|
chain |
A |
residue |
118-142 |
type |
prosite |
sequence |
PRLVIVTDPRSDAQAIKESSYVNIP
|
description |
RIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PrlVIVtDprsDaqaIkEssyvNIP
|
source |
prosite : PS00963
|
|
76)
|
chain |
X |
residue |
62-69 |
type |
prosite |
sequence |
KQPNSAIR
|
description |
RIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAiR
|
source |
prosite : PS00055
|
|
77)
|
chain |
N |
residue |
98-128 |
type |
prosite |
sequence |
VRKHLERNRKDKDAKFRLILIESRIHRLARY
|
description |
RIBOSOMAL_S15 Ribosomal protein S15 signature. VrkHLernRkDkdAkfrLilIesrihrLarY
|
source |
prosite : PS00362
|
|
78)
|
chain |
c |
residue |
58-66 |
type |
prosite |
sequence |
ESEREARRL
|
description |
RIBOSOMAL_S28E Ribosomal protein S28e signature. ESEREARrL
|
source |
prosite : PS00961
|
|
79)
|
chain |
S |
residue |
123-136 |
type |
prosite |
sequence |
RGIRHFWGLRVRGQ
|
description |
RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGiRHfwGlrVRGQ
|
source |
prosite : PS00646
|
|
80)
|
chain |
O |
residue |
102-124 |
type |
prosite |
sequence |
LRALARSGLRIGRIEDVTPVPSD
|
description |
RIBOSOMAL_S11 Ribosomal protein S11 signature. LrALarS.GLrIgrieDvTPvPSD
|
source |
prosite : PS00054
|
|
81)
|
chain |
P |
residue |
98-122 |
type |
prosite |
sequence |
NGKVFNQVEIRPEMVGHYLGEFSIT
|
description |
RIBOSOMAL_S19 Ribosomal protein S19 signature. NGKvfnqveIrpemVGhyLGEFsiT
|
source |
prosite : PS00323
|
|
82)
|
chain |
F |
residue |
93-119 |
type |
prosite |
sequence |
ERLTNSLMMNGRNNGKKLKAVRIVKHT
|
description |
RIBOSOMAL_S7 Ribosomal protein S7 signature. ErLtnsLMmngrnnGKKlkavrIVkhT
|
source |
prosite : PS00052
|
|
83)
|
chain |
I |
residue |
11-30 |
type |
prosite |
sequence |
RAATGAKRAQFRKKRKFELG
|
description |
RIBOSOMAL_S8E Ribosomal protein S8e signature. RaaTGAkraqf.RkKrKfELG
|
source |
prosite : PS01193
|
|
84)
|
chain |
i |
residue |
41-63 |
type |
prosite |
sequence |
MLGNGRVEASCFDGNKRMAHIRG
|
description |
IF1A Eukaryotic initiation factor 1A signature. MlGnGRveasCfDGnkRmaHIrG
|
source |
prosite : PS01262
|
|
85)
|
chain |
W |
residue |
100-117 |
type |
prosite |
sequence |
GYVILTTSAGIMDHEEAH
|
description |
RIBOSOMAL_S8 Ribosomal protein S8 signature. GyvILTTSaGIMdheeAH
|
source |
prosite : PS00053
|
|
86)
|
chain |
T |
residue |
90-109 |
type |
prosite |
sequence |
PHKHVDASGSINRKVLQSLE
|
description |
RIBOSOMAL_S19E Ribosomal protein S19e signature. PhkhvdaSgsInRkVLQsLE
|
source |
prosite : PS00628
|
|
87)
|
chain |
H |
residue |
76-89 |
type |
prosite |
sequence |
KLTRELEKKFQDRH
|
description |
RIBOSOMAL_S7E Ribosomal protein S7e signature. KLtRELEKKFQdRH
|
source |
prosite : PS00948
|
|
88)
|
chain |
L |
residue |
120-132 |
type |
prosite |
sequence |
GDIVTVGQCRPIS
|
description |
RIBOSOMAL_S17 Ribosomal protein S17 signature. GDiVtVgQcRPIS
|
source |
prosite : PS00056
|
|
89)
|
chain |
C |
residue |
98-130 |
type |
prosite |
sequence |
GQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAI
|
description |
RIBOSOMAL_S5 Ribosomal protein S5 signature. GQrtrFkAvvVVGDsn.GhVGlGiktak.EVag.AI
|
source |
prosite : PS00585
|
|
90)
|
chain |
g |
residue |
81-95 |
type |
prosite |
sequence |
AVSASWDKTLRLWNL
|
description |
WD_REPEATS_1 Trp-Asp (WD) repeats signature. AVSAswDkTLRLWNL
|
source |
prosite : PS00678
|
|
91)
|
chain |
g |
residue |
123-137 |
type |
prosite |
sequence |
IISASRDKTIRVWNT
|
description |
WD_REPEATS_1 Trp-Asp (WD) repeats signature. AVSAswDkTLRLWNL
|
source |
prosite : PS00678
|
|
92)
|
chain |
g |
residue |
218-232 |
type |
prosite |
sequence |
AASAGKDGQIYVWNL
|
description |
WD_REPEATS_1 Trp-Asp (WD) repeats signature. AVSAswDkTLRLWNL
|
source |
prosite : PS00678
|
|
93)
|
chain |
s |
residue |
67-81 |
type |
prosite |
sequence |
CVTGSADYSIKLWDV
|
description |
WD_REPEATS_1 Trp-Asp (WD) repeats signature. AVSAswDkTLRLWNL
|
source |
prosite : PS00678
|
|