eF-site ID 6ftg-x
PDB Code 6ftg
Chain x

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Title Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes
Classification PROTEIN TRANSPORT
Compound uL2
Source ORGANISM_COMMON: Rabbit; ORGANISM_SCIENTIFIC: Oryctolagus cuniculus;
Sequence x:  FLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLV
CCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPI
VTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIIT
IGQSIVYVMSGICLLITIQLFVAGLIVLLLDELLQKGYGL
GSGISLFIATNICETIVWKAFSPTTVNTGRGMEFEGAIIA
LFHLLATRTDKVRALREAFYRQNLPNLMNLIATIFVFAVV
IYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQS
ALVSNLYVISQMLSARFPVGGLCHYLSPPESFGSVLEDPV
HAVVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQM
VMRGHRETSMVHELNRYIPTAAAFGGLCIGALSVLADFLG
AIGSGTGILLAVTIIYQYFEIFVKEQ
Description (1)  Uncharacterized protein, Ribosomal protein L4, 60S ribosomal protein L5, 60S ribosomal protein L6, Ribosomal protein L10 (Predicted), Ribosomal protein L11, eL13, Ribosomal protein L14, Ribosomal protein L15, uL13, uL22, uL14, eL19, eL20, eL22, Ribosomal protein L24, Ribosomal protein L26, 60S ribosomal protein L27, 60S ribosomal protein L29, eL30, eL32, eL33, 60S ribosomal protein L36, Ribosomal protein L37, eL38, eL39, eL40, 60s ribosomal protein l41, Ribosomal protein L37a, 60S acidic ribosomal protein P0, Ribosomal protein L12, Protein transport protein Sec61 subunit alpha isoform 1, Protein transport protein Sec61 subunit gamma, Protein transport protein Sec61 subunit beta, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1,RPN1, TMEM258, Oligosaccharyltransferase complex subunit OSTC, OST4, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A, DAD1, OST48, RPN2/RNA Complex


Functional site

1) chain x
residue 444-458
type TOPO_DOM
sequence GTGILLAVTIIYQYF
description Cytoplasmic => ECO:0000305
source Swiss-Prot : SWS_FT_FI1

2) chain x
residue 357-379
type TOPO_DOM
sequence DPVHAVVYIVFMLGSCAFFSKTW
description Cytoplasmic => ECO:0000305
source Swiss-Prot : SWS_FT_FI1

3) chain x
residue 421-437
type TOPO_DOM
sequence AAFGGLCIGALSVLADF
description Cytoplasmic => ECO:0000305
source Swiss-Prot : SWS_FT_FI1

4) chain x
residue 164-182
type prosite
sequence LLDELLQKGYGLGSGISLF
description SECY_2 Protein secY signature 2. LLdElLQkgyGLGSGiSLF
source prosite : PS00756

5) chain x
residue 75-94
type prosite
sequence TLMELGISPIVTSGLIMQLL
description SECY_1 Protein secY signature 1. TLMeLGIsPIVtSGLIMQLL
source prosite : PS00755

6) chain x
residue 197-241
type TRANSMEM
sequence SPTTVNTGRGMEFEGAIIALFHLLATRTDKVRALREAFYR
QNLPN
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

7) chain x
residue 307-356
type TRANSMEM
sequence MLSARFPVGGLCHYLSPPESFGSVLE
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

8) chain x
residue 438-443
type TRANSMEM
sequence LGAIGS
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI2


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