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eF-site ID
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6ftg-C |
PDB Code
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6ftg |
Chain
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C |
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click to enlarge
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Title
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Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes |
Classification
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PROTEIN TRANSPORT |
Compound
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uL2 |
Source
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ORGANISM_COMMON: Rabbit; ORGANISM_SCIENTIFIC: Oryctolagus cuniculus; |
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Sequence
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C: |
ACARPLISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVH
TNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRG
GGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR
YAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGY
KKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRR
IQRRGPCVIYNEDNGIVKAFRNIPGITLLNVTKLNILKLA
PGGHVGRFCIWTESAFRKLDDLYGTWRKAASLKSNYNLPM
HKMLNTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKN
LRIMLKLNPYAKTMRRNTILRQARNHKLRVERAAAALAAK
KS
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Description
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(1) |
Uncharacterized protein, Ribosomal protein L4, 60S ribosomal protein L5, 60S ribosomal protein L6, Ribosomal protein L10 (Predicted), Ribosomal protein L11, eL13, Ribosomal protein L14, Ribosomal protein L15, uL13, uL22, uL14, eL19, eL20, eL22, Ribosomal protein L24, Ribosomal protein L26, 60S ribosomal protein L27, 60S ribosomal protein L29, eL30, eL32, eL33, 60S ribosomal protein L36, Ribosomal protein L37, eL38, eL39, eL40, 60s ribosomal protein l41, Ribosomal protein L37a, 60S acidic ribosomal protein P0, Ribosomal protein L12, Protein transport protein Sec61 subunit alpha isoform 1, Protein transport protein Sec61 subunit gamma, Protein transport protein Sec61 subunit beta, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1,RPN1, TMEM258, Oligosaccharyltransferase complex subunit OSTC, OST4, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A, DAD1, OST48, RPN2/RNA Complex
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Functional site
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1)
|
chain |
C |
residue |
313 |
type |
CARBOHYD |
sequence |
V
|
description |
N-linked (GlcNAc...) (high mannose) asparagine => ECO:0000250|UniProtKB:P39007
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source |
Swiss-Prot : SWS_FT_FI9
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2)
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chain |
C |
residue |
347 |
type |
CROSSLNK |
sequence |
H
|
description |
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO1); alternate => ECO:0000250|UniProtKB:P36578
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source |
Swiss-Prot : SWS_FT_FI10
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3)
|
chain |
C |
residue |
15-22 |
type |
prosite |
sequence |
GESSGKNV
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description |
ALDEHYDE_DEHYDR_GLU Aldehyde dehydrogenases glutamic acid active site. GESSGKNV
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source |
prosite : PS00687
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4)
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chain |
C |
residue |
116-142 |
type |
prosite |
sequence |
NTTQKRYAICSALAASALPALVMSKGH
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description |
RIBOSOMAL_L1E Ribosomal protein L1e signature. NttqKryAIcSALaASAlpalvmsKGH
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source |
prosite : PS00939
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