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eF-site ID
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6ftg-B |
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PDB Code
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6ftg |
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Chain
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B |
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click to enlarge
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Title
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Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes |
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Classification
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PROTEIN TRANSPORT |
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Compound
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uL2 |
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Source
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ORGANISM_COMMON: Rabbit; ORGANISM_SCIENTIFIC: Oryctolagus cuniculus; |
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Sequence
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B: |
SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPV
HLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVET
PPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN
WHKSKKKAFTKYCKKWQDDAGKRQLDKDFSSMKKYCQVIR
VLAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERL
EQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP
RKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEIN
KKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFV
HYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALE
KIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLKKD
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Description
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(1) |
Uncharacterized protein, Ribosomal protein L4, 60S ribosomal protein L5, 60S ribosomal protein L6, Ribosomal protein L10 (Predicted), Ribosomal protein L11, eL13, Ribosomal protein L14, Ribosomal protein L15, uL13, uL22, uL14, eL19, eL20, eL22, Ribosomal protein L24, Ribosomal protein L26, 60S ribosomal protein L27, 60S ribosomal protein L29, eL30, eL32, eL33, 60S ribosomal protein L36, Ribosomal protein L37, eL38, eL39, eL40, 60s ribosomal protein l41, Ribosomal protein L37a, 60S acidic ribosomal protein P0, Ribosomal protein L12, Protein transport protein Sec61 subunit alpha isoform 1, Protein transport protein Sec61 subunit gamma, Protein transport protein Sec61 subunit beta, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1,RPN1, TMEM258, Oligosaccharyltransferase complex subunit OSTC, OST4, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A, DAD1, OST48, RPN2/RNA Complex
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Functional site
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1)
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chain |
B |
| residue |
211-234 |
| type |
prosite |
| sequence |
FGQDEMIDVIGVTKGKGYKGVTSR
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| description |
RIBOSOMAL_L3 Ribosomal protein L3 signature. FgqdemiDviGvTkGKGykGvtsR
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| source |
prosite : PS00474
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2)
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chain |
B |
| residue |
226 |
| type |
SITE |
| sequence |
K
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| description |
Interacts with target acceptor peptide in protein substrate => ECO:0000250|UniProtKB:B9KDD4
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| source |
Swiss-Prot : SWS_FT_FI6
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3)
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chain |
B |
| residue |
386 |
| type |
SITE |
| sequence |
K
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| description |
Interacts with target acceptor peptide in protein substrate => ECO:0000250|UniProtKB:B9KDD4
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| source |
Swiss-Prot : SWS_FT_FI6
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4)
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chain |
B |
| residue |
393 |
| type |
SITE |
| sequence |
K
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| description |
Interacts with target acceptor peptide in protein substrate => ECO:0000250|UniProtKB:B9KDD4
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| source |
Swiss-Prot : SWS_FT_FI6
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5)
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chain |
B |
| residue |
366 |
| type |
SITE |
| sequence |
K
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| description |
Important for catalytic activity => ECO:0000250|UniProtKB:B9KDD4
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| source |
Swiss-Prot : SWS_FT_FI7
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