|
eF-site ID
|
6fq3-A |
PDB Code
|
6fq3 |
Chain
|
A |
|
click to enlarge
|
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Title
|
Crystal structure of Danio rerio Lin41 filamin-NHL domains in complex with lin-29A 5'UTR 13mer RNA |
Classification
|
RNA BINDING PROTEIN |
Compound
|
E3 ubiquitin-protein ligase TRIM71 |
Source
|
null (6FQ3) |
|
Sequence
|
A: |
SSGAFATASKAHGEGIKRALQGKPASFTVVGYDHDGEPRL
SGGDSVSVVLMSPDGNLSSAEVSDHQDGTYTVSYLPKGEG
EHLLSVLICNQHIEGSPFKVMVKSGRSYGGVGLPMASFGG
EGDGDGQLCRPWGICVDKEGYVVVADRSNNRVQIFKPCGT
FHHKFGTLGSRPGQFDRPAGVACDSQRRIIVADKDNHRIQ
IFTFDGQFLLKFGEKGTKNGQFNYPWDVAVNFEGKILVSD
TRNHRVQLFGPDGTFLNKYGFEGALWKHFDSPRGVAFNQE
GHLVVTDFNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQ
GVAVDQEDRIIVADSRNHRIQVFEPNGNFLCKFGTHGNGF
GQMDRPSGIAVTPDGVIVAVDFGNNRILMF
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
A |
residue |
678 |
type |
|
sequence |
H
|
description |
binding site for residue CL A 902
|
source |
: AC1
|
|
2)
|
chain |
A |
residue |
555 |
type |
|
sequence |
E
|
description |
binding site for residue CL A 904
|
source |
: AC2
|
|
3)
|
chain |
A |
residue |
653 |
type |
|
sequence |
N
|
description |
binding site for residue CL A 905
|
source |
: AC3
|
|
4)
|
chain |
A |
residue |
694 |
type |
|
sequence |
G
|
description |
binding site for residue CL A 906
|
source |
: AC4
|
|
5)
|
chain |
A |
residue |
726 |
type |
|
sequence |
R
|
description |
binding site for residue CL A 907
|
source |
: AC5
|
|
|
|