eF-site ID 6fms-D
PDB Code 6fms
Chain D

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Title IMISX-EP of Se-LspA
Classification HYDROLASE
Compound Lipoprotein signal peptidase
Source (6FMS)
Sequence D:  PWLWITVLVFVLDQVSKAFFQAELSXYQQIVVIPDLFSWT
LAYNTGAAFSFLADSSGWQRWLFALIAIVVSASLVVWLKR
LKKGETWLAIALALVLGGALGNLYDRXVLGHVVDFILVHW
QNRWYFPAFNLADSAITVGAVXLALDXFR
Description


Functional site

1) chain D
residue 28
type
sequence A
description binding site for residue OLC A 203
source : AC3

2) chain D
residue 32
type
sequence A
description binding site for residue OLC A 203
source : AC3

3) chain D
residue 31
type
sequence Q
description binding site for residue OLC A 204
source : AC4

4) chain D
residue 114
type
sequence Y
description binding site for residue OLC A 204
source : AC4

5) chain D
residue 29
type
sequence F
description binding site for residue OLC D 201
source : AD7

6) chain D
residue 40
type
sequence I
description binding site for residue OLC D 201
source : AD7

7) chain D
residue 49
type
sequence W
description binding site for residue OLC D 202
source : AD8

8) chain D
residue 139
type
sequence F
description binding site for residue OLC H 301
source : AE2

9) chain D
residue 143
type
sequence D
description binding site for residue OLC H 301
source : AE2

10) chain D
residue 147
type
sequence T
description binding site for residue OLC H 301
source : AE2

11) chain D
residue 54
type
sequence N
description binding site for Ligand residues ALO H 204 through SER H 203 bound to SER H 203
source : AE6

12) chain D
residue 57
type
sequence A
description binding site for Ligand residues ALO H 204 through SER H 203 bound to SER H 203
source : AE6

13) chain D
residue 59
type
sequence F
description binding site for Ligand residues ALO H 204 through SER H 203 bound to SER H 203
source : AE6

14) chain D
residue 73
type
sequence F
description binding site for Ligand residues ALO H 204 through SER H 203 bound to SER H 203
source : AE6

15) chain D
residue 80
type
sequence V
description binding site for Ligand residues ALO H 204 through SER H 203 bound to SER H 203
source : AE6

16) chain D
residue 109
type
sequence A
description binding site for Ligand residues ALO H 204 through SER H 203 bound to SER H 203
source : AE6

17) chain D
residue 112
type
sequence N
description binding site for Ligand residues ALO H 204 through SER H 203 bound to SER H 203
source : AE6

18) chain D
residue 116
type
sequence R
description binding site for Ligand residues ALO H 204 through SER H 203 bound to SER H 203
source : AE6

19) chain D
residue 124
type
sequence D
description binding site for Ligand residues ALO H 204 through SER H 203 bound to SER H 203
source : AE6

20) chain D
residue 143
type
sequence D
description binding site for Ligand residues ALO H 204 through SER H 203 bound to SER H 203
source : AE6

21) chain D
residue 146
type
sequence I
description binding site for Ligand residues ALO H 204 through SER H 203 bound to SER H 203
source : AE6

22) chain D
residue 31-67
type TOPO_DOM
sequence QAELSXYQQIVVIPDLFSWTLAYNTGAAFSFLADSSG
description Periplasmic => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI2

23) chain D
residue 119-140
type TOPO_DOM
sequence LGHVVDFILVHWQNRWYFPAFN
description Periplasmic => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI2

24) chain D
residue 68-89
type TRANSMEM
sequence WQRWLFALIAIVVSASLVVWLK
description Helical => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI3

25) chain D
residue 97-118
type TRANSMEM
sequence WLAIALALVLGGALGNLYDRXV
description Helical => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI3

26) chain D
residue 90-96
type TOPO_DOM
sequence RLKKGET
description Cytoplasmic => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI4

27) chain D
residue 141-154
type TRANSMEM
sequence LADSAITVGAVXLA
description Helical => ECO:0000269|PubMed:26912896, ECO:0007744|PDB:5DIR
source Swiss-Prot : SWS_FT_FI5

28) chain D
residue 124
type ACT_SITE
sequence D
description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_00161, ECO:0000305|PubMed:26912896
source Swiss-Prot : SWS_FT_FI7

29) chain D
residue 143
type ACT_SITE
sequence D
description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_00161, ECO:0000305|PubMed:26912896
source Swiss-Prot : SWS_FT_FI7


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