eF-site ID 6fms-B
PDB Code 6fms
Chain B

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Title IMISX-EP of Se-LspA
Classification HYDROLASE
Compound Lipoprotein signal peptidase
Source (6FMS)
Sequence B:  PDVDRFGRLPWLWITVLVFVLDQVSKAFFQAELSXYQQIV
VIPDLFSWTLAYNTGAAFSFLADSSGWQRWLFALIAIVVS
ASLVVWLKRLKKGETWLAIALALVLGGALGNLYDRXVLGH
VVDFILVHWQNRWYFPAFNLADSAITVGAVXLALDXF
Description


Functional site

1) chain B
residue 8
type
sequence G
description binding site for residue OLC B 202
source : AC6

2) chain B
residue 9
type
sequence R
description binding site for residue OLC B 202
source : AC6

3) chain B
residue 11
type
sequence P
description binding site for residue OLC B 202
source : AC6

4) chain B
residue 12
type
sequence W
description binding site for residue OLC B 202
source : AC6

5) chain B
residue 15
type
sequence I
description binding site for residue OLC B 202
source : AC6

6) chain B
residue 93
type
sequence K
description binding site for residue OLC B 202
source : AC6

7) chain B
residue 104
type
sequence L
description binding site for residue OLC B 202
source : AC6

8) chain B
residue 10
type
sequence L
description binding site for residue OLC B 203
source : AC7

9) chain B
residue 14
type
sequence W
description binding site for residue OLC B 203
source : AC7

10) chain B
residue 130
type
sequence W
description binding site for residue OLC B 204
source : AC8

11) chain B
residue 133
type
sequence R
description binding site for residue OLC B 204
source : AC8

12) chain B
residue 134
type
sequence W
description binding site for residue OLC B 204
source : AC8

13) chain B
residue 33
type
sequence E
description binding site for residue OLC B 205
source : AC9

14) chain B
residue 49
type
sequence W
description binding site for residue OLC B 206
source : AD1

15) chain B
residue 55
type
sequence T
description binding site for residue OLC F 301
source : AE1

16) chain B
residue 137
type
sequence P
description binding site for residue OLC F 301
source : AE1

17) chain B
residue 139
type
sequence F
description binding site for residue OLC F 301
source : AE1

18) chain B
residue 143
type
sequence D
description binding site for residue OLC F 301
source : AE1

19) chain B
residue 147
type
sequence T
description binding site for residue OLC F 301
source : AE1

20) chain B
residue 62
type
sequence L
description binding site for Ligand residues ALO F 204 through SER F 203 bound to SER F 203
source : AE4

21) chain B
residue 73
type
sequence F
description binding site for Ligand residues ALO F 204 through SER F 203 bound to SER F 203
source : AE4

22) chain B
residue 77
type
sequence A
description binding site for Ligand residues ALO F 204 through SER F 203 bound to SER F 203
source : AE4

23) chain B
residue 80
type
sequence V
description binding site for Ligand residues ALO F 204 through SER F 203 bound to SER F 203
source : AE4

24) chain B
residue 112
type
sequence N
description binding site for Ligand residues ALO F 204 through SER F 203 bound to SER F 203
source : AE4

25) chain B
residue 116
type
sequence R
description binding site for Ligand residues ALO F 204 through SER F 203 bound to SER F 203
source : AE4

26) chain B
residue 122
type
sequence V
description binding site for Ligand residues ALO F 204 through SER F 203 bound to SER F 203
source : AE4

27) chain B
residue 124
type
sequence D
description binding site for Ligand residues ALO F 204 through SER F 203 bound to SER F 203
source : AE4

28) chain B
residue 140
type
sequence N
description binding site for Ligand residues ALO F 204 through SER F 203 bound to SER F 203
source : AE4

29) chain B
residue 143
type
sequence D
description binding site for Ligand residues ALO F 204 through SER F 203 bound to SER F 203
source : AE4

30) chain B
residue 146
type
sequence I
description binding site for Ligand residues ALO F 204 through SER F 203 bound to SER F 203
source : AE4

31) chain B
residue 10-30
type TRANSMEM
sequence LPWLWITVLVFVLDQVSKAFF
description Helical => ECO:0000255|HAMAP-Rule:MF_00161, ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI1

32) chain B
residue 31-67
type TOPO_DOM
sequence QAELSXYQQIVVIPDLFSWTLAYNTGAAFSFLADSSG
description Periplasmic => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI2

33) chain B
residue 119-140
type TOPO_DOM
sequence LGHVVDFILVHWQNRWYFPAFN
description Periplasmic => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI2

34) chain B
residue 68-89
type TRANSMEM
sequence WQRWLFALIAIVVSASLVVWLK
description Helical => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI3

35) chain B
residue 97-118
type TRANSMEM
sequence WLAIALALVLGGALGNLYDRXV
description Helical => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI3

36) chain B
residue 90-96
type TOPO_DOM
sequence RLKKGET
description Cytoplasmic => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI4

37) chain B
residue 141-154
type TRANSMEM
sequence LADSAITVGAVXLA
description Helical => ECO:0000269|PubMed:26912896, ECO:0007744|PDB:5DIR
source Swiss-Prot : SWS_FT_FI5

38) chain B
residue 124
type ACT_SITE
sequence D
description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_00161, ECO:0000305|PubMed:26912896
source Swiss-Prot : SWS_FT_FI7

39) chain B
residue 143
type ACT_SITE
sequence D
description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_00161, ECO:0000305|PubMed:26912896
source Swiss-Prot : SWS_FT_FI7


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