eF-site ID 6fms-ABCD
PDB Code 6fms
Chain A, B, C, D

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Title IMISX-EP of Se-LspA
Classification HYDROLASE
Compound Lipoprotein signal peptidase
Source (6FMS)
Sequence A:  PDVDRFGRLPWLWITVLVFVLDQVSKAFFQAELSXYQQIV
VIPDLFSWTLAYNTGAAFSFLADSSGWQRWLFALIAIVVS
ASLVVWLKRLKKGETWLAIALALVLGGALGNLYDRXVLGH
VVDFILVHWQNRWYFPAFNLADSAITVGAVXLALDXF
B:  PDVDRFGRLPWLWITVLVFVLDQVSKAFFQAELSXYQQIV
VIPDLFSWTLAYNTGAAFSFLADSSGWQRWLFALIAIVVS
ASLVVWLKRLKKGETWLAIALALVLGGALGNLYDRXVLGH
VVDFILVHWQNRWYFPAFNLADSAITVGAVXLALDXF
C:  PWLWITVLVFVLDQVSKAFFQAELSXYQQIVVIPDLFSWT
LAYNTGAAFSFLADSSGWQRWLFALIAIVVSASLVVWLKR
LKKGETWLAIALALVLGGALGNLYDRXVLGHVVDFILVHW
QNRWYFPAFNLADSAITVGAVXLALDXFR
D:  PWLWITVLVFVLDQVSKAFFQAELSXYQQIVVIPDLFSWT
LAYNTGAAFSFLADSSGWQRWLFALIAIVVSASLVVWLKR
LKKGETWLAIALALVLGGALGNLYDRXVLGHVVDFILVHW
QNRWYFPAFNLADSAITVGAVXLALDXFR
Description


Functional site

1) chain A
residue 29
type
sequence F
description binding site for residue OLC A 201
source : AC1

2) chain A
residue 40
type
sequence I
description binding site for residue OLC A 201
source : AC1

3) chain A
residue 42
type
sequence V
description binding site for residue OLC A 202
source : AC2

4) chain A
residue 49
type
sequence W
description binding site for residue OLC A 202
source : AC2

5) chain A
residue 11
type
sequence P
description binding site for residue OLC A 203
source : AC3

6) chain A
residue 12
type
sequence W
description binding site for residue OLC A 203
source : AC3

7) chain A
residue 15
type
sequence I
description binding site for residue OLC A 203
source : AC3

8) chain D
residue 28
type
sequence A
description binding site for residue OLC A 203
source : AC3

9) chain D
residue 32
type
sequence A
description binding site for residue OLC A 203
source : AC3

10) chain A
residue 7
type
sequence F
description binding site for residue OLC A 204
source : AC4

11) chain A
residue 10
type
sequence L
description binding site for residue OLC A 204
source : AC4

12) chain A
residue 11
type
sequence P
description binding site for residue OLC A 204
source : AC4

13) chain A
residue 14
type
sequence W
description binding site for residue OLC A 204
source : AC4

14) chain D
residue 31
type
sequence Q
description binding site for residue OLC A 204
source : AC4

15) chain D
residue 114
type
sequence Y
description binding site for residue OLC A 204
source : AC4

16) chain A
residue 70
type
sequence R
description binding site for residue OLC A 205
source : AC5

17) chain A
residue 117
type
sequence X
description binding site for residue OLC A 205
source : AC5

18) chain B
residue 8
type
sequence G
description binding site for residue OLC B 202
source : AC6

19) chain B
residue 9
type
sequence R
description binding site for residue OLC B 202
source : AC6

20) chain B
residue 11
type
sequence P
description binding site for residue OLC B 202
source : AC6

21) chain B
residue 12
type
sequence W
description binding site for residue OLC B 202
source : AC6

22) chain B
residue 15
type
sequence I
description binding site for residue OLC B 202
source : AC6

23) chain B
residue 93
type
sequence K
description binding site for residue OLC B 202
source : AC6

24) chain B
residue 104
type
sequence L
description binding site for residue OLC B 202
source : AC6

25) chain B
residue 10
type
sequence L
description binding site for residue OLC B 203
source : AC7

26) chain B
residue 14
type
sequence W
description binding site for residue OLC B 203
source : AC7

27) chain C
residue 114
type
sequence Y
description binding site for residue OLC B 203
source : AC7

28) chain A
residue 63
type
sequence A
description binding site for residue OLC B 204
source : AC8

29) chain A
residue 64
type
sequence D
description binding site for residue OLC B 204
source : AC8

30) chain B
residue 130
type
sequence W
description binding site for residue OLC B 204
source : AC8

31) chain B
residue 133
type
sequence R
description binding site for residue OLC B 204
source : AC8

32) chain B
residue 134
type
sequence W
description binding site for residue OLC B 204
source : AC8

33) chain B
residue 33
type
sequence E
description binding site for residue OLC B 205
source : AC9

34) chain B
residue 49
type
sequence W
description binding site for residue OLC B 206
source : AD1

35) chain C
residue 139
type
sequence F
description binding site for residue OLC C 201
source : AD2

36) chain C
residue 143
type
sequence D
description binding site for residue OLC C 201
source : AD2

37) chain C
residue 147
type
sequence T
description binding site for residue OLC C 201
source : AD2

38) chain C
residue 41
type
sequence V
description binding site for residue OLC C 202
source : AD3

39) chain C
residue 49
type
sequence W
description binding site for residue OLC C 202
source : AD3

40) chain C
residue 110
type
sequence L
description binding site for residue OLC C 203
source : AD4

41) chain C
residue 117
type
sequence X
description binding site for residue OLC C 203
source : AD4

42) chain C
residue 118
type
sequence V
description binding site for residue OLC C 203
source : AD4

43) chain C
residue 70
type
sequence R
description binding site for residue OLC C 204
source : AD5

44) chain C
residue 117
type
sequence X
description binding site for residue OLC C 204
source : AD5

45) chain C
residue 29
type
sequence F
description binding site for residue OLC C 205
source : AD6

46) chain C
residue 33
type
sequence E
description binding site for residue OLC C 205
source : AD6

47) chain C
residue 49
type
sequence W
description binding site for residue OLC C 205
source : AD6

48) chain D
residue 29
type
sequence F
description binding site for residue OLC D 201
source : AD7

49) chain D
residue 40
type
sequence I
description binding site for residue OLC D 201
source : AD7

50) chain D
residue 49
type
sequence W
description binding site for residue OLC D 202
source : AD8

51) chain A
residue 139
type
sequence F
description binding site for residue OLC E 301
source : AD9

52) chain A
residue 143
type
sequence D
description binding site for residue OLC E 301
source : AD9

53) chain A
residue 148
type
sequence V
description binding site for residue OLC E 301
source : AD9

54) chain B
residue 55
type
sequence T
description binding site for residue OLC F 301
source : AE1

55) chain B
residue 137
type
sequence P
description binding site for residue OLC F 301
source : AE1

56) chain B
residue 139
type
sequence F
description binding site for residue OLC F 301
source : AE1

57) chain B
residue 143
type
sequence D
description binding site for residue OLC F 301
source : AE1

58) chain B
residue 147
type
sequence T
description binding site for residue OLC F 301
source : AE1

59) chain D
residue 139
type
sequence F
description binding site for residue OLC H 301
source : AE2

60) chain D
residue 143
type
sequence D
description binding site for residue OLC H 301
source : AE2

61) chain D
residue 147
type
sequence T
description binding site for residue OLC H 301
source : AE2

62) chain A
residue 54
type
sequence N
description binding site for Ligand residues ALO E 204 through SER E 203 bound to SER E 203
source : AE3

63) chain A
residue 56
type
sequence G
description binding site for Ligand residues ALO E 204 through SER E 203 bound to SER E 203
source : AE3

64) chain A
residue 59
type
sequence F
description binding site for Ligand residues ALO E 204 through SER E 203 bound to SER E 203
source : AE3

65) chain A
residue 73
type
sequence F
description binding site for Ligand residues ALO E 204 through SER E 203 bound to SER E 203
source : AE3

66) chain A
residue 112
type
sequence N
description binding site for Ligand residues ALO E 204 through SER E 203 bound to SER E 203
source : AE3

67) chain A
residue 116
type
sequence R
description binding site for Ligand residues ALO E 204 through SER E 203 bound to SER E 203
source : AE3

68) chain A
residue 124
type
sequence D
description binding site for Ligand residues ALO E 204 through SER E 203 bound to SER E 203
source : AE3

69) chain A
residue 143
type
sequence D
description binding site for Ligand residues ALO E 204 through SER E 203 bound to SER E 203
source : AE3

70) chain B
residue 62
type
sequence L
description binding site for Ligand residues ALO F 204 through SER F 203 bound to SER F 203
source : AE4

71) chain B
residue 73
type
sequence F
description binding site for Ligand residues ALO F 204 through SER F 203 bound to SER F 203
source : AE4

72) chain B
residue 77
type
sequence A
description binding site for Ligand residues ALO F 204 through SER F 203 bound to SER F 203
source : AE4

73) chain B
residue 80
type
sequence V
description binding site for Ligand residues ALO F 204 through SER F 203 bound to SER F 203
source : AE4

74) chain B
residue 112
type
sequence N
description binding site for Ligand residues ALO F 204 through SER F 203 bound to SER F 203
source : AE4

75) chain B
residue 116
type
sequence R
description binding site for Ligand residues ALO F 204 through SER F 203 bound to SER F 203
source : AE4

76) chain B
residue 122
type
sequence V
description binding site for Ligand residues ALO F 204 through SER F 203 bound to SER F 203
source : AE4

77) chain B
residue 124
type
sequence D
description binding site for Ligand residues ALO F 204 through SER F 203 bound to SER F 203
source : AE4

78) chain B
residue 140
type
sequence N
description binding site for Ligand residues ALO F 204 through SER F 203 bound to SER F 203
source : AE4

79) chain B
residue 143
type
sequence D
description binding site for Ligand residues ALO F 204 through SER F 203 bound to SER F 203
source : AE4

80) chain B
residue 146
type
sequence I
description binding site for Ligand residues ALO F 204 through SER F 203 bound to SER F 203
source : AE4

81) chain C
residue 54
type
sequence N
description binding site for Ligand residues ALO G 204 through SER G 203 bound to SER G 203
source : AE5

82) chain C
residue 59
type
sequence F
description binding site for Ligand residues ALO G 204 through SER G 203 bound to SER G 203
source : AE5

83) chain C
residue 73
type
sequence F
description binding site for Ligand residues ALO G 204 through SER G 203 bound to SER G 203
source : AE5

84) chain C
residue 77
type
sequence A
description binding site for Ligand residues ALO G 204 through SER G 203 bound to SER G 203
source : AE5

85) chain C
residue 112
type
sequence N
description binding site for Ligand residues ALO G 204 through SER G 203 bound to SER G 203
source : AE5

86) chain C
residue 116
type
sequence R
description binding site for Ligand residues ALO G 204 through SER G 203 bound to SER G 203
source : AE5

87) chain C
residue 122
type
sequence V
description binding site for Ligand residues ALO G 204 through SER G 203 bound to SER G 203
source : AE5

88) chain C
residue 124
type
sequence D
description binding site for Ligand residues ALO G 204 through SER G 203 bound to SER G 203
source : AE5

89) chain C
residue 143
type
sequence D
description binding site for Ligand residues ALO G 204 through SER G 203 bound to SER G 203
source : AE5

90) chain C
residue 146
type
sequence I
description binding site for Ligand residues ALO G 204 through SER G 203 bound to SER G 203
source : AE5

91) chain D
residue 54
type
sequence N
description binding site for Ligand residues ALO H 204 through SER H 203 bound to SER H 203
source : AE6

92) chain D
residue 57
type
sequence A
description binding site for Ligand residues ALO H 204 through SER H 203 bound to SER H 203
source : AE6

93) chain D
residue 59
type
sequence F
description binding site for Ligand residues ALO H 204 through SER H 203 bound to SER H 203
source : AE6

94) chain D
residue 73
type
sequence F
description binding site for Ligand residues ALO H 204 through SER H 203 bound to SER H 203
source : AE6

95) chain D
residue 80
type
sequence V
description binding site for Ligand residues ALO H 204 through SER H 203 bound to SER H 203
source : AE6

96) chain D
residue 109
type
sequence A
description binding site for Ligand residues ALO H 204 through SER H 203 bound to SER H 203
source : AE6

97) chain D
residue 112
type
sequence N
description binding site for Ligand residues ALO H 204 through SER H 203 bound to SER H 203
source : AE6

98) chain D
residue 116
type
sequence R
description binding site for Ligand residues ALO H 204 through SER H 203 bound to SER H 203
source : AE6

99) chain D
residue 124
type
sequence D
description binding site for Ligand residues ALO H 204 through SER H 203 bound to SER H 203
source : AE6

100) chain D
residue 143
type
sequence D
description binding site for Ligand residues ALO H 204 through SER H 203 bound to SER H 203
source : AE6

101) chain D
residue 146
type
sequence I
description binding site for Ligand residues ALO H 204 through SER H 203 bound to SER H 203
source : AE6

102) chain A
residue 10-30
type TRANSMEM
sequence LPWLWITVLVFVLDQVSKAFF
description Helical => ECO:0000255|HAMAP-Rule:MF_00161, ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI1

103) chain B
residue 10-30
type TRANSMEM
sequence LPWLWITVLVFVLDQVSKAFF
description Helical => ECO:0000255|HAMAP-Rule:MF_00161, ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI1

104) chain A
residue 31-67
type TOPO_DOM
sequence QAELSXYQQIVVIPDLFSWTLAYNTGAAFSFLADSSG
description Periplasmic => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI2

105) chain A
residue 119-140
type TOPO_DOM
sequence LGHVVDFILVHWQNRWYFPAFN
description Periplasmic => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI2

106) chain B
residue 31-67
type TOPO_DOM
sequence QAELSXYQQIVVIPDLFSWTLAYNTGAAFSFLADSSG
description Periplasmic => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI2

107) chain B
residue 119-140
type TOPO_DOM
sequence LGHVVDFILVHWQNRWYFPAFN
description Periplasmic => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI2

108) chain C
residue 31-67
type TOPO_DOM
sequence QAELSXYQQIVVIPDLFSWTLAYNTGAAFSFLADSSG
description Periplasmic => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI2

109) chain C
residue 119-140
type TOPO_DOM
sequence LGHVVDFILVHWQNRWYFPAFN
description Periplasmic => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI2

110) chain D
residue 31-67
type TOPO_DOM
sequence QAELSXYQQIVVIPDLFSWTLAYNTGAAFSFLADSSG
description Periplasmic => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI2

111) chain D
residue 119-140
type TOPO_DOM
sequence LGHVVDFILVHWQNRWYFPAFN
description Periplasmic => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI2

112) chain A
residue 105-117
type prosite
sequence VLGGALGNLYDRX
description SPASE_II Signal peptidases II signature. VlGGALGNLYDRM
source prosite : PS00855

113) chain A
residue 68-89
type TRANSMEM
sequence WQRWLFALIAIVVSASLVVWLK
description Helical => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI3

114) chain A
residue 97-118
type TRANSMEM
sequence WLAIALALVLGGALGNLYDRXV
description Helical => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI3

115) chain B
residue 68-89
type TRANSMEM
sequence WQRWLFALIAIVVSASLVVWLK
description Helical => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI3

116) chain B
residue 97-118
type TRANSMEM
sequence WLAIALALVLGGALGNLYDRXV
description Helical => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI3

117) chain C
residue 68-89
type TRANSMEM
sequence WQRWLFALIAIVVSASLVVWLK
description Helical => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI3

118) chain C
residue 97-118
type TRANSMEM
sequence WLAIALALVLGGALGNLYDRXV
description Helical => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI3

119) chain D
residue 68-89
type TRANSMEM
sequence WQRWLFALIAIVVSASLVVWLK
description Helical => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI3

120) chain D
residue 97-118
type TRANSMEM
sequence WLAIALALVLGGALGNLYDRXV
description Helical => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI3

121) chain A
residue 90-96
type TOPO_DOM
sequence RLKKGET
description Cytoplasmic => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI4

122) chain B
residue 90-96
type TOPO_DOM
sequence RLKKGET
description Cytoplasmic => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI4

123) chain C
residue 90-96
type TOPO_DOM
sequence RLKKGET
description Cytoplasmic => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI4

124) chain D
residue 90-96
type TOPO_DOM
sequence RLKKGET
description Cytoplasmic => ECO:0000269|PubMed:26912896, ECO:0000269|PubMed:30272004, ECO:0007744|PDB:5DIR, ECO:0007744|PDB:6FMS
source Swiss-Prot : SWS_FT_FI4

125) chain A
residue 141-154
type TRANSMEM
sequence LADSAITVGAVXLA
description Helical => ECO:0000269|PubMed:26912896, ECO:0007744|PDB:5DIR
source Swiss-Prot : SWS_FT_FI5

126) chain B
residue 141-154
type TRANSMEM
sequence LADSAITVGAVXLA
description Helical => ECO:0000269|PubMed:26912896, ECO:0007744|PDB:5DIR
source Swiss-Prot : SWS_FT_FI5

127) chain C
residue 141-154
type TRANSMEM
sequence LADSAITVGAVXLA
description Helical => ECO:0000269|PubMed:26912896, ECO:0007744|PDB:5DIR
source Swiss-Prot : SWS_FT_FI5

128) chain D
residue 141-154
type TRANSMEM
sequence LADSAITVGAVXLA
description Helical => ECO:0000269|PubMed:26912896, ECO:0007744|PDB:5DIR
source Swiss-Prot : SWS_FT_FI5

129) chain A
residue 124
type ACT_SITE
sequence D
description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_00161, ECO:0000305|PubMed:26912896
source Swiss-Prot : SWS_FT_FI7

130) chain A
residue 143
type ACT_SITE
sequence D
description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_00161, ECO:0000305|PubMed:26912896
source Swiss-Prot : SWS_FT_FI7

131) chain B
residue 124
type ACT_SITE
sequence D
description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_00161, ECO:0000305|PubMed:26912896
source Swiss-Prot : SWS_FT_FI7

132) chain B
residue 143
type ACT_SITE
sequence D
description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_00161, ECO:0000305|PubMed:26912896
source Swiss-Prot : SWS_FT_FI7

133) chain C
residue 124
type ACT_SITE
sequence D
description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_00161, ECO:0000305|PubMed:26912896
source Swiss-Prot : SWS_FT_FI7

134) chain C
residue 143
type ACT_SITE
sequence D
description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_00161, ECO:0000305|PubMed:26912896
source Swiss-Prot : SWS_FT_FI7

135) chain D
residue 124
type ACT_SITE
sequence D
description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_00161, ECO:0000305|PubMed:26912896
source Swiss-Prot : SWS_FT_FI7

136) chain D
residue 143
type ACT_SITE
sequence D
description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_00161, ECO:0000305|PubMed:26912896
source Swiss-Prot : SWS_FT_FI7


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