eF-site ID 6fko-B
PDB Code 6fko
Chain B

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Title Deoxyguanylosuccinate synthase (DgsS) quaternary structure with ATP, dGMP, hadacidin at 2.1 Angstrom resolution
Classification BIOSYNTHETIC PROTEIN
Compound Adenylosuccinate synthetase
Source (G3FFN6_9CAUD)
Sequence B:  MENVDLVIDLQFGSTGKGLIAGYLAEKNGYDTVINANMPN
AGHTYINAEGRKWMHKVLPNGIVSPNLKRVMLGAGSVFSI
NRLMEEIEMSKDLLHDKVAILIHPMATVLDEEAHKKAEVG
IATSIGSTGQGSMAAMVEKLQRDPTNNTIVARDVAQYDGR
IAQYVCTVEEWDMALMASERILAEGAQGFSLSLNQEFYPY
CTSRDCTPARFLADMGIPLPMLNKVIGTARCHPIRVGGTS
GGHYPDQEELTWEQLGQVPELTTVTKKVRRVFSFSFIQMQ
KAMWTCQPDEVFLNFCNYLSPMGWQDIVHQIEVAAQSRYC
DAEVKYLGFGPTFNDVELREDVM
Description (1)  Adenylosuccinate synthetase


Functional site

1) chain B
residue 142
type
sequence R
description binding site for residue DGP A 402
source : AC2

2) chain B
residue 12
type
sequence F
description binding site for residue DGP B 401
source : AC5

3) chain B
residue 14
type
sequence S
description binding site for residue DGP B 401
source : AC5

4) chain B
residue 40
type
sequence N
description binding site for residue DGP B 401
source : AC5

5) chain B
residue 41
type
sequence A
description binding site for residue DGP B 401
source : AC5

6) chain B
residue 126
type
sequence G
description binding site for residue DGP B 401
source : AC5

7) chain B
residue 127
type
sequence S
description binding site for residue DGP B 401
source : AC5

8) chain B
residue 128
type
sequence T
description binding site for residue DGP B 401
source : AC5

9) chain B
residue 187
type
sequence Q
description binding site for residue DGP B 401
source : AC5

10) chain B
residue 191
type
sequence L
description binding site for residue DGP B 401
source : AC5

11) chain B
residue 201
type
sequence C
description binding site for residue DGP B 401
source : AC5

12) chain B
residue 202
type
sequence T
description binding site for residue DGP B 401
source : AC5

13) chain B
residue 236
type
sequence V
description binding site for residue DGP B 401
source : AC5

14) chain B
residue 13
type
sequence G
description binding site for residue ATP B 402
source : AC6

15) chain B
residue 14
type
sequence S
description binding site for residue ATP B 402
source : AC6

16) chain B
residue 15
type
sequence T
description binding site for residue ATP B 402
source : AC6

17) chain B
residue 16
type
sequence G
description binding site for residue ATP B 402
source : AC6

18) chain B
residue 17
type
sequence K
description binding site for residue ATP B 402
source : AC6

19) chain B
residue 18
type
sequence G
description binding site for residue ATP B 402
source : AC6

20) chain B
residue 41
type
sequence A
description binding site for residue ATP B 402
source : AC6

21) chain B
residue 42
type
sequence G
description binding site for residue ATP B 402
source : AC6

22) chain B
residue 43
type
sequence H
description binding site for residue ATP B 402
source : AC6

23) chain B
residue 44
type
sequence T
description binding site for residue ATP B 402
source : AC6

24) chain B
residue 187
type
sequence Q
description binding site for residue ATP B 402
source : AC6

25) chain B
residue 294
type
sequence N
description binding site for residue ATP B 402
source : AC6

26) chain B
residue 295
type
sequence F
description binding site for residue ATP B 402
source : AC6

27) chain B
residue 297
type
sequence N
description binding site for residue ATP B 402
source : AC6

28) chain B
residue 330
type
sequence G
description binding site for residue ATP B 402
source : AC6

29) chain B
residue 331
type
sequence P
description binding site for residue ATP B 402
source : AC6

30) chain B
residue 264
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6TNH
source Swiss-Prot : SWS_FT_FI3

31) chain B
residue 269
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6TNH
source Swiss-Prot : SWS_FT_FI3

32) chain B
residue 14
type ACT_SITE
sequence S
description Proton acceptor => ECO:0000255|HAMAP-Rule:MF_04166, ECO:0000305|PubMed:33926954
source Swiss-Prot : SWS_FT_FI1

33) chain B
residue 14
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

34) chain B
residue 15
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

35) chain B
residue 16
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

36) chain B
residue 17
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

37) chain B
residue 18
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

38) chain B
residue 40
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

39) chain B
residue 42
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

40) chain B
residue 43
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

41) chain B
residue 44
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

42) chain B
residue 127
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

43) chain B
residue 128
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

44) chain B
residue 142
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

45) chain B
residue 187
type BINDING
sequence Q
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

46) chain B
residue 202
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

47) chain B
residue 263
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

48) chain B
residue 294
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

49) chain B
residue 297
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

50) chain B
residue 330
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2


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