eF-site ID 6fko-A
PDB Code 6fko
Chain A

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Title Deoxyguanylosuccinate synthase (DgsS) quaternary structure with ATP, dGMP, hadacidin at 2.1 Angstrom resolution
Classification BIOSYNTHETIC PROTEIN
Compound Adenylosuccinate synthetase
Source (G3FFN6_9CAUD)
Sequence A:  MENVDLVIDLQFGSTGKGLIAGYLAEKNGYDTVINANMPN
AGHTYINAEGRKWMHKVLPNGIVSPNLKRVMLGAGSVFSI
NRLMEEIEMSKDLLHDKVAILIHPMATVLDEEAHKKAEVG
IATSIGSTGQGSMAAMVEKLQRDPTNNTIVARDVAQYDGR
IAQYVCTVEEWDMALMASERILAEGAQGFSLSLNQEFYPY
CTSRDCTPARFLADMGIPLPMLNKVIGTARCHPIRVGGTS
GGHYPDQEELTWEQLGQVPELTTVTKKVRRVFSFSFIQMQ
KAMWTCQPDEVFLNFCNYLSPMGWQDIVHQIEVAAQSRYC
DAEVKYLGFGPTFNDVELREDVM
Description (1)  Adenylosuccinate synthetase


Functional site

1) chain A
residue 41
type
sequence A
description binding site for residue HDA A 401
source : AC1

2) chain A
residue 262
type
sequence T
description binding site for residue HDA A 401
source : AC1

3) chain A
residue 263
type
sequence T
description binding site for residue HDA A 401
source : AC1

4) chain A
residue 264
type
sequence V
description binding site for residue HDA A 401
source : AC1

5) chain A
residue 269
type
sequence R
description binding site for residue HDA A 401
source : AC1

6) chain A
residue 14
type
sequence S
description binding site for residue DGP A 402
source : AC2

7) chain A
residue 40
type
sequence N
description binding site for residue DGP A 402
source : AC2

8) chain A
residue 41
type
sequence A
description binding site for residue DGP A 402
source : AC2

9) chain A
residue 126
type
sequence G
description binding site for residue DGP A 402
source : AC2

10) chain A
residue 127
type
sequence S
description binding site for residue DGP A 402
source : AC2

11) chain A
residue 128
type
sequence T
description binding site for residue DGP A 402
source : AC2

12) chain A
residue 187
type
sequence Q
description binding site for residue DGP A 402
source : AC2

13) chain A
residue 191
type
sequence L
description binding site for residue DGP A 402
source : AC2

14) chain A
residue 201
type
sequence C
description binding site for residue DGP A 402
source : AC2

15) chain A
residue 202
type
sequence T
description binding site for residue DGP A 402
source : AC2

16) chain A
residue 236
type
sequence V
description binding site for residue DGP A 402
source : AC2

17) chain A
residue 24
type
sequence L
description binding site for residue FLC A 403
source : AC3

18) chain A
residue 27
type
sequence K
description binding site for residue FLC A 403
source : AC3

19) chain A
residue 28
type
sequence N
description binding site for residue FLC A 403
source : AC3

20) chain A
residue 180
type
sequence R
description binding site for residue FLC A 403
source : AC3

21) chain A
residue 224
type
sequence K
description binding site for residue FLC A 403
source : AC3

22) chain A
residue 290
type
sequence E
description binding site for residue FLC A 403
source : AC3

23) chain A
residue 325
type
sequence K
description binding site for residue FLC A 403
source : AC3

24) chain A
residue 326
type
sequence Y
description binding site for residue FLC A 403
source : AC3

25) chain A
residue 14
type
sequence S
description binding site for residue ATP A 404
source : AC4

26) chain A
residue 15
type
sequence T
description binding site for residue ATP A 404
source : AC4

27) chain A
residue 16
type
sequence G
description binding site for residue ATP A 404
source : AC4

28) chain A
residue 17
type
sequence K
description binding site for residue ATP A 404
source : AC4

29) chain A
residue 18
type
sequence G
description binding site for residue ATP A 404
source : AC4

30) chain A
residue 41
type
sequence A
description binding site for residue ATP A 404
source : AC4

31) chain A
residue 42
type
sequence G
description binding site for residue ATP A 404
source : AC4

32) chain A
residue 43
type
sequence H
description binding site for residue ATP A 404
source : AC4

33) chain A
residue 44
type
sequence T
description binding site for residue ATP A 404
source : AC4

34) chain A
residue 187
type
sequence Q
description binding site for residue ATP A 404
source : AC4

35) chain A
residue 294
type
sequence N
description binding site for residue ATP A 404
source : AC4

36) chain A
residue 295
type
sequence F
description binding site for residue ATP A 404
source : AC4

37) chain A
residue 297
type
sequence N
description binding site for residue ATP A 404
source : AC4

38) chain A
residue 330
type
sequence G
description binding site for residue ATP A 404
source : AC4

39) chain A
residue 331
type
sequence P
description binding site for residue ATP A 404
source : AC4

40) chain A
residue 142
type
sequence R
description binding site for residue DGP B 401
source : AC5

41) chain A
residue 14
type ACT_SITE
sequence S
description Proton acceptor => ECO:0000255|HAMAP-Rule:MF_04166, ECO:0000305|PubMed:33926954
source Swiss-Prot : SWS_FT_FI1

42) chain A
residue 14
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

43) chain A
residue 127
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

44) chain A
residue 128
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

45) chain A
residue 142
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

46) chain A
residue 187
type BINDING
sequence Q
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

47) chain A
residue 202
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

48) chain A
residue 263
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

49) chain A
residue 294
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

50) chain A
residue 297
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

51) chain A
residue 330
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

52) chain A
residue 15
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

53) chain A
residue 16
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

54) chain A
residue 17
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

55) chain A
residue 18
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

56) chain A
residue 40
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

57) chain A
residue 42
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

58) chain A
residue 43
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

59) chain A
residue 44
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6FM1
source Swiss-Prot : SWS_FT_FI2

60) chain A
residue 264
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6TNH
source Swiss-Prot : SWS_FT_FI3

61) chain A
residue 269
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:33926955, ECO:0007744|PDB:6TNH
source Swiss-Prot : SWS_FT_FI3


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