eF-site ID 6fe3-B
PDB Code 6fe3
Chain B

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Title Crystal structure of T. brucei PDE-B1 catalytic domain with inhibitor NPD-1439
Classification HYDROLASE
Compound Phosphodiesterase
Source (Q8WQX9_9TRYP)
Sequence B:  VTAITKVEREAVLVCELPSFDVTDVEFDLFRARESTDKPL
DVAAAIAYRLLLGSGLPQKFGCSDEVLLNFILQCRKKYRN
VPYHNFYHVVDVCQTIHTFLYRGNVYEKLTELECFVLLIT
ALVHDLDHMGLNNSFYLKTESPLGILSSASGNTSVLEVHH
CNLAVEILSDPESDVFDGLEGAERTLAFRSMIDCVLATDM
AKHGSALEAFLASAADQSSDEAAFHRMTMEIILKAGDISN
VTKPFDISRQWAMAVTEEFYRQGDMEKERGVEVLPMFDRS
KNMELAKGQIGFIDFVAAPFFQKIVDACLQGMQWTVDRIK
SNRAQWERVLET
Description


Functional site

1) chain B
residue 665
type
sequence N
description binding site for residue GAI A 1002
source : AC2

2) chain B
residue 810
type
sequence H
description binding site for residue GAI A 1012
source : AD3

3) chain B
residue 691
type
sequence Y
description binding site for residue GOL B 1001
source : AD4

4) chain B
residue 694
type
sequence L
description binding site for residue GOL B 1001
source : AD4

5) chain B
residue 688
type
sequence G
description binding site for residue GOL B 1002
source : AD5

6) chain B
residue 689
type
sequence N
description binding site for residue GOL B 1002
source : AD5

7) chain B
residue 692
type
sequence E
description binding site for residue GOL B 1002
source : AD5

8) chain B
residue 893
type
sequence C
description binding site for residue GOL B 1002
source : AD5

9) chain B
residue 894
type
sequence L
description binding site for residue GOL B 1002
source : AD5

10) chain B
residue 895
type
sequence Q
description binding site for residue GOL B 1002
source : AD5

11) chain B
residue 896
type
sequence G
description binding site for residue GOL B 1002
source : AD5

12) chain B
residue 686
type
sequence Y
description binding site for residue GOL B 1003
source : AD6

13) chain B
residue 691
type
sequence Y
description binding site for residue GOL B 1003
source : AD6

14) chain B
residue 673
type
sequence H
description binding site for residue ZN B 1004
source : AD7

15) chain B
residue 709
type
sequence H
description binding site for residue ZN B 1004
source : AD7

16) chain B
residue 710
type
sequence D
description binding site for residue ZN B 1004
source : AD7

17) chain B
residue 822
type
sequence D
description binding site for residue ZN B 1004
source : AD7

18) chain B
residue 710
type
sequence D
description binding site for residue MG B 1005
source : AD8

19) chain B
residue 762
type
sequence D
description binding site for residue GAI B 1006
source : AD9

20) chain B
residue 764
type
sequence L
description binding site for residue GAI B 1006
source : AD9

21) chain B
residue 769
type
sequence R
description binding site for residue GAI B 1006
source : AD9

22) chain B
residue 644
type
sequence K
description binding site for residue GOL B 1008
source : AE2

23) chain B
residue 696
type
sequence E
description binding site for residue GOL B 1008
source : AE2


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