|
eF-site ID
|
6f1t-n |
PDB Code
|
6f1t |
Chain
|
n |
|
click to enlarge
|
|
Title
|
Cryo-EM structure of two dynein tail domains bound to dynactin and BICDR1 |
Classification
|
MOTOR PROTEIN |
Compound
|
ARP1 actin related protein 1 homolog A |
Source
|
ORGANISM_COMMON: Pig; ORGANISM_SCIENTIFIC: Sus scrofa; |
|
Sequence
|
n: |
AVQNVADVSVLQKHLRKLVPLLLEDGGEAPAALEAALEEK
SALEQMRKFLSDPQVHTVLVERSTLKEDKEFISYNINIDI
HYGVKSNSLAFIKRTPVIDADKPVSSQLRVLTLSEDSPYE
TLHSFISNAVAPFFKSYIRESKMAPSVEKKIAELEMGLLH
LQQNIEIPEISLPIHPMITNVAKQCYERGEKPKVTDFGDK
VEDPTFLNQLQSGVNRWIREIQKVTKLDRDPASGTALQEI
SFWLNLERALYRIQEKRESPEVLLTLDILKHGKRFHATVS
FDTDTGLKQALETVNDYNPLMKDFPLNDLLSATELDKIRQ
ALVAIFTHLRKIRNTKYPIQRALRLVEAISRDLSSQLLKV
LGTRKLMHVAYEEFEKVMVACFEVFQTWDDEYEKLQVLLR
DIVKRKREENLKMVWRINPAHRKLQARLDQMRKFRRQHEQ
LRAVIVRANAIEEVNLAYENVKEVDGLDVSKEGTEAWEAA
MKRYDERIDRVETRITARLRDQLGTAKNANEMFRIFSRFN
ALFVRPHIRGAIREYQTQLIQRVKDDIESLHDKFKVQYPQ
SQACKMSHVRDLPPVSGSIIWAKQIDRQLTAYMKRVEDVL
GKGWENHVEGQKLKQDGDSFRMKLNTQEIFDDWARKVQQR
NLGVSGRIFTIESTRVRGRTGNVLKLKVNFLPEIITLSKE
VRNLKWLGFRVPLAIVNKAHQANQLYPFAISLIESVRTYE
RTCEKVEERNTISLLVAGLKKEVQALIAEGIALVWESYKL
DPYVQRLAETVFNFQEKVDDLLIIEEKIDLEVRSLETCMY
DHKTFSEILNRVQKAVDDLNLHSYSNLPIWVNKLDMEIER
ILGVRLQAGLRAWTQVLLXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXLEESYSAVMGIVS
EVEQYVKV
|
|
Description
|
(1) |
ARP1 actin related protein 1 homolog A, Actin, cytoplasmic 1, Actin related protein 10 homolog, Capping protein (Actin filament) muscle Z-line, alpha 1, F-actin capping protein beta subunit, Dynactin Subunit 2, Dynactin Subunit 3, Dynactin 6, Dynactin Subunit 5, BICD family-like cargo adapter 1,BICDR-1, Dynactin Subunit 4, Dynactin Subunit 1, Cytoplasmic dynein 1 heavy chain 1,Dynein Heavy Chain,Cytoplasmic dynein 1 heavy chain 1, Cytoplasmic dynein 1 intermediate chain 2, Cytoplasmic dynein 1 light intermediate chain 2, Dynein light chain roadblock-type 1, BICD family-like cargo adapter 1
|
|
Functional site
|
|
1)
|
chain |
n |
residue |
554 |
type |
|
sequence |
D
|
description |
binding site for Di-peptide ASP n 558 and GLU n 561
|
source |
: AD2
|
|
2)
|
chain |
n |
residue |
555 |
type |
|
sequence |
E
|
description |
binding site for Di-peptide ASP n 558 and GLU n 561
|
source |
: AD2
|
|
3)
|
chain |
n |
residue |
556 |
type |
|
sequence |
R
|
description |
binding site for Di-peptide ASP n 558 and GLU n 561
|
source |
: AD2
|
|
4)
|
chain |
n |
residue |
557 |
type |
|
sequence |
I
|
description |
binding site for Di-peptide ASP n 558 and GLU n 561
|
source |
: AD2
|
|
5)
|
chain |
n |
residue |
559 |
type |
|
sequence |
R
|
description |
binding site for Di-peptide ASP n 558 and GLU n 561
|
source |
: AD2
|
|
6)
|
chain |
n |
residue |
560 |
type |
|
sequence |
V
|
description |
binding site for Di-peptide ASP n 558 and GLU n 561
|
source |
: AD2
|
|
7)
|
chain |
n |
residue |
562 |
type |
|
sequence |
T
|
description |
binding site for Di-peptide ASP n 558 and GLU n 561
|
source |
: AD2
|
|
8)
|
chain |
n |
residue |
563 |
type |
|
sequence |
R
|
description |
binding site for Di-peptide ASP n 558 and GLU n 561
|
source |
: AD2
|
|
9)
|
chain |
n |
residue |
564 |
type |
|
sequence |
I
|
description |
binding site for Di-peptide ASP n 558 and GLU n 561
|
source |
: AD2
|
|
|
|