eF-site ID 6f1t-n
PDB Code 6f1t
Chain n

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Title Cryo-EM structure of two dynein tail domains bound to dynactin and BICDR1
Classification MOTOR PROTEIN
Compound ARP1 actin related protein 1 homolog A
Source ORGANISM_COMMON: Pig; ORGANISM_SCIENTIFIC: Sus scrofa;
Sequence n:  AVQNVADVSVLQKHLRKLVPLLLEDGGEAPAALEAALEEK
SALEQMRKFLSDPQVHTVLVERSTLKEDKEFISYNINIDI
HYGVKSNSLAFIKRTPVIDADKPVSSQLRVLTLSEDSPYE
TLHSFISNAVAPFFKSYIRESKMAPSVEKKIAELEMGLLH
LQQNIEIPEISLPIHPMITNVAKQCYERGEKPKVTDFGDK
VEDPTFLNQLQSGVNRWIREIQKVTKLDRDPASGTALQEI
SFWLNLERALYRIQEKRESPEVLLTLDILKHGKRFHATVS
FDTDTGLKQALETVNDYNPLMKDFPLNDLLSATELDKIRQ
ALVAIFTHLRKIRNTKYPIQRALRLVEAISRDLSSQLLKV
LGTRKLMHVAYEEFEKVMVACFEVFQTWDDEYEKLQVLLR
DIVKRKREENLKMVWRINPAHRKLQARLDQMRKFRRQHEQ
LRAVIVRANAIEEVNLAYENVKEVDGLDVSKEGTEAWEAA
MKRYDERIDRVETRITARLRDQLGTAKNANEMFRIFSRFN
ALFVRPHIRGAIREYQTQLIQRVKDDIESLHDKFKVQYPQ
SQACKMSHVRDLPPVSGSIIWAKQIDRQLTAYMKRVEDVL
GKGWENHVEGQKLKQDGDSFRMKLNTQEIFDDWARKVQQR
NLGVSGRIFTIESTRVRGRTGNVLKLKVNFLPEIITLSKE
VRNLKWLGFRVPLAIVNKAHQANQLYPFAISLIESVRTYE
RTCEKVEERNTISLLVAGLKKEVQALIAEGIALVWESYKL
DPYVQRLAETVFNFQEKVDDLLIIEEKIDLEVRSLETCMY
DHKTFSEILNRVQKAVDDLNLHSYSNLPIWVNKLDMEIER
ILGVRLQAGLRAWTQVLLXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXLEESYSAVMGIVS
EVEQYVKV
Description (1)  ARP1 actin related protein 1 homolog A, Actin, cytoplasmic 1, Actin related protein 10 homolog, Capping protein (Actin filament) muscle Z-line, alpha 1, F-actin capping protein beta subunit, Dynactin Subunit 2, Dynactin Subunit 3, Dynactin 6, Dynactin Subunit 5, BICD family-like cargo adapter 1,BICDR-1, Dynactin Subunit 4, Dynactin Subunit 1, Cytoplasmic dynein 1 heavy chain 1,Dynein Heavy Chain,Cytoplasmic dynein 1 heavy chain 1, Cytoplasmic dynein 1 intermediate chain 2, Cytoplasmic dynein 1 light intermediate chain 2, Dynein light chain roadblock-type 1, BICD family-like cargo adapter 1


Functional site

1) chain n
residue 554
type
sequence D
description binding site for Di-peptide ASP n 558 and GLU n 561
source : AD2

2) chain n
residue 555
type
sequence E
description binding site for Di-peptide ASP n 558 and GLU n 561
source : AD2

3) chain n
residue 556
type
sequence R
description binding site for Di-peptide ASP n 558 and GLU n 561
source : AD2

4) chain n
residue 557
type
sequence I
description binding site for Di-peptide ASP n 558 and GLU n 561
source : AD2

5) chain n
residue 559
type
sequence R
description binding site for Di-peptide ASP n 558 and GLU n 561
source : AD2

6) chain n
residue 560
type
sequence V
description binding site for Di-peptide ASP n 558 and GLU n 561
source : AD2

7) chain n
residue 562
type
sequence T
description binding site for Di-peptide ASP n 558 and GLU n 561
source : AD2

8) chain n
residue 563
type
sequence R
description binding site for Di-peptide ASP n 558 and GLU n 561
source : AD2

9) chain n
residue 564
type
sequence I
description binding site for Di-peptide ASP n 558 and GLU n 561
source : AD2


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