eF-site ID 6f1t-H
PDB Code 6f1t
Chain H

click to enlarge
Title Cryo-EM structure of two dynein tail domains bound to dynactin and BICDR1
Classification MOTOR PROTEIN
Compound ARP1 actin related protein 1 homolog A
Source ORGANISM_COMMON: Pig; ORGANISM_SCIENTIFIC: Sus scrofa;
Sequence H:  AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
TFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPI
YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE
REIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDG
QVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKC
DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTM
KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES
GPSIVHRKCF
Description (1)  ARP1 actin related protein 1 homolog A, Actin, cytoplasmic 1, Actin related protein 10 homolog, Capping protein (Actin filament) muscle Z-line, alpha 1, F-actin capping protein beta subunit, Dynactin Subunit 2, Dynactin Subunit 3, Dynactin 6, Dynactin Subunit 5, BICD family-like cargo adapter 1,BICDR-1, Dynactin Subunit 4, Dynactin Subunit 1, Cytoplasmic dynein 1 heavy chain 1,Dynein Heavy Chain,Cytoplasmic dynein 1 heavy chain 1, Cytoplasmic dynein 1 intermediate chain 2, Cytoplasmic dynein 1 light intermediate chain 2, Dynein light chain roadblock-type 1, BICD family-like cargo adapter 1


Functional site

1) chain H
residue 11
type
sequence D
description binding site for residue ATP H 401
source : AC8

2) chain H
residue 13
type
sequence G
description binding site for residue ATP H 401
source : AC8

3) chain H
residue 14
type
sequence S
description binding site for residue ATP H 401
source : AC8

4) chain H
residue 15
type
sequence G
description binding site for residue ATP H 401
source : AC8

5) chain H
residue 16
type
sequence M
description binding site for residue ATP H 401
source : AC8

6) chain H
residue 18
type
sequence K
description binding site for residue ATP H 401
source : AC8

7) chain H
residue 137
type
sequence Q
description binding site for residue ATP H 401
source : AC8

8) chain H
residue 156
type
sequence G
description binding site for residue ATP H 401
source : AC8

9) chain H
residue 157
type
sequence D
description binding site for residue ATP H 401
source : AC8

10) chain H
residue 210
type
sequence R
description binding site for residue ATP H 401
source : AC8

11) chain H
residue 213
type
sequence K
description binding site for residue ATP H 401
source : AC8

12) chain H
residue 214
type
sequence E
description binding site for residue ATP H 401
source : AC8

13) chain H
residue 302
type
sequence G
description binding site for residue ATP H 401
source : AC8

14) chain H
residue 303
type
sequence T
description binding site for residue ATP H 401
source : AC8

15) chain H
residue 305
type
sequence M
description binding site for residue ATP H 401
source : AC8

16) chain H
residue 306
type
sequence Y
description binding site for residue ATP H 401
source : AC8

17) chain H
residue 53-63
type prosite
sequence YVGDEAQSKRG
description ACTINS_1 Actins signature 1. YVGDEAQs.KRG
source prosite : PS00406

18) chain H
residue 356-364
type prosite
sequence WISKQEYDE
description ACTINS_2 Actins signature 2. WISKqEYDE
source prosite : PS00432

19) chain H
residue 104-116
type prosite
sequence LLTEAPLNPKANR
description ACTINS_ACT_LIKE Actins and actin-related proteins signature. LLTEApLNPkaNR
source prosite : PS01132


Display surface

Download
Links