eF-site ID 6eu2-A
PDB Code 6eu2
Chain A

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Title Apo RNA Polymerase III - open conformation (oPOL3)
Classification TRANSCRIPTION
Compound DNA-directed RNA polymerase III subunit RPC1
Source ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae (strain ATCC 204508 / S288c);
Sequence A:  KEVVVSETPKRIKGLEFSALSAADIVAQSEVEVSTRDLFD
LEKDRAPKANGALDPKMGVSSSSLECATCHGNLASCHGHF
GHLKLALPVFHIGYFKATIQILQGICKNCSAILLSETDKR
QFLHELRRPGVDNLRRMGILKKILDQCKKQRRCLHCGALN
GVVKKAAALKIIHDTFRWVGKKSAPEKDIWVGEWKEVLAH
NPELERYVKRCMDDLNPLKTLNLFKQIKSADCELLGIDAT
VPSGRPETYIWRYLPAPPVCIRPSVMMQDSPASNEDDLTV
KLTEIVWTSSLIKAGLDKGISINNMMEHWDYLQLTVAMYI
NSGNLSGKRVDFSGRTVISPDPNLSIDEVAVPDRVAKVLT
YPEKVTRYNRHKLQELIVNGPNVHPGANYLLKRNEDARRN
LRYGDRMKLAKNLQIGDVVERHLEDGDVVLFNRQPSLHRL
SILSHYAKIRPWRTFRLNECVCTPYNADFDGDEMNLHVPQ
TEEARAEAINLMGVKNNLLTPKSGEPIIAATQDFITGSYL
ISHKDSFYDRATLTQLLSMMSDGIEHFDIPPPAIMKPYYL
WTGKQVFSLLIKPNHNSPVVINLDAKNKVFVPPKSKSLPN
EMSQNDGFVIIRGSQILSGVMDKSVLGDGKKHSVFYTILR
DYGPQEAANAMNRMAKLCARFLGNRGFSIGINDVTPADDL
KQKKEELVEIAYHKCDELITLFNKGELETQPGCNEEQTLE
AKIGGLLSKVREEVGDVCINELDNWNAPLIMATCGSKGST
LNVSQMVAVVGQQIISGNRVPDGFQDRSLPHFPKNSKTPQ
SKGFVRNSFFSGLSPPEFLFHAISGREGLVDTAVKTAETG
YMSRRLMKSLEDLSCQYDNTVRTSANGIVQFTYGGDGLDP
LEMEGNAQPVNFNRSWDHAYNITFNNQDKGLLPYAIMETA
NEILGPLEERLVRYDNSGCLVKREDLNKAEYVDQYDAERD
FYHSLREYINGKATALANLRKSRGMLGLLEPPAKELQGID
PDETVPDNVKTSVSQLYRISEKSVRKFLEIALFKYRKARL
EPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGV
PRIKEIINASKVISTPIINAVLVNDNDERAARVVKGRVEK
TLLSDVAFYVQDVYKDNLSFIQVRIDLGTIDKLQLELTIE
DIAVAITRASKLKIQASDVNIIGKDRIAINVFPSENDVFY
RMQQLRRALPDVVVKGLPDISRAVINIRDDGKRELLVEGY
GLRDVMCTDGVIGSRTTTNHVLEVFSVLGIEAARYSIIRE
INYTMSNHGMSVDPRHIQLLGDVMTYKGEVLGITRFGLSK
MRDSVLQLASFEKTTDHLFDAAFYMKKDAVEGVSECIILG
QTMSIGTGSFKVVKGTNISEKDLVPKRCLFESLSNEAALK
AN
Description (1)  DNA-directed RNA polymerase III subunit RPC1 (E.C.2.7.7.6), DNA-directed RNA polymerase III subunit RPC2 (E.C.2.7.7.6), DNA-directed RNA polymerases I and III subunit RPAC1, DNA-directed RNA polymerase III subunit RPC9, DNA-directed RNA polymerases I, II, and III subunit RPABC1, DNA-directed RNA polymerases I, II, and III subunit RPABC2, DNA-directed RNA polymerase III subunit RPC8, DNA-directed RNA polymerases I, II, and III subunit RPABC3, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerases I, II, and III subunit RPABC5, DNA-directed RNA polymerases I and III subunit RPAC2, DNA-directed RNA polymerases I, II, and III subunit RPABC4, DNA-directed RNA polymerase III subunit RPC5, DNA-directed RNA polymerase III subunit RPC4, DNA-directed RNA polymerase III subunit RPC3, DNA-directed RNA polymerase III subunit RPC6, DNA-directed RNA polymerase III subunit RPC7


Functional site

1) chain A
residue 67
type
sequence C
description binding site for residue ZN A 2000
source : AC1

2) chain A
residue 69
type
sequence T
description binding site for residue ZN A 2000
source : AC1

3) chain A
residue 70
type
sequence C
description binding site for residue ZN A 2000
source : AC1

4) chain A
residue 77
type
sequence C
description binding site for residue ZN A 2000
source : AC1

5) chain A
residue 80
type
sequence H
description binding site for residue ZN A 2000
source : AC1

6) chain A
residue 107
type
sequence C
description binding site for residue ZN A 2001
source : AC2

7) chain A
residue 110
type
sequence C
description binding site for residue ZN A 2001
source : AC2

8) chain A
residue 154
type
sequence C
description binding site for residue ZN A 2001
source : AC2

9) chain A
residue 157
type
sequence C
description binding site for residue ZN A 2001
source : AC2

10) chain A
residue 511
type
sequence D
description binding site for residue MG A 2002
source : AC3

11) chain A
residue 513
type
sequence D
description binding site for residue MG A 2002
source : AC3

12) chain A
residue 515
type
sequence D
description binding site for residue MG A 2002
source : AC3

13) chain A
residue 515
type MOD_RES
sequence D
description Phosphoserine => ECO:0007744|PubMed:18407956, ECO:0007744|PubMed:19779198
source Swiss-Prot : SWS_FT_FI1

14) chain A
residue 107
type MOD_RES
sequence C
description Phosphoserine => ECO:0007744|PubMed:18407956, ECO:0007744|PubMed:19779198
source Swiss-Prot : SWS_FT_FI1

15) chain A
residue 110
type MOD_RES
sequence C
description Phosphoserine => ECO:0007744|PubMed:18407956, ECO:0007744|PubMed:19779198
source Swiss-Prot : SWS_FT_FI1

16) chain A
residue 154
type MOD_RES
sequence C
description Phosphoserine => ECO:0007744|PubMed:18407956, ECO:0007744|PubMed:19779198
source Swiss-Prot : SWS_FT_FI1

17) chain A
residue 511
type MOD_RES
sequence D
description Phosphoserine => ECO:0007744|PubMed:18407956, ECO:0007744|PubMed:19779198
source Swiss-Prot : SWS_FT_FI1

18) chain A
residue 513
type MOD_RES
sequence D
description Phosphoserine => ECO:0007744|PubMed:18407956, ECO:0007744|PubMed:19779198
source Swiss-Prot : SWS_FT_FI1


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