|
|
eF-site ID
|
6e1v-A |
|
PDB Code
|
6e1v |
|
Chain
|
A |
|
click to enlarge
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Title
|
Crystal structure of a class I PreQ1 riboswitch complexed with a synthetic compound 3: 2-[(9H-carbazol-3-yl)oxy]-N,N-dimethylethan-1-amine |
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Classification
|
RNA |
|
Compound
|
RNA (33-MER) |
|
Source
|
(6E1V) |
|
|
Sequence
|
A: |
CUGGGUCGCAGUXXXCCCAGUUAACAAAACAAG
|
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Description
|
|
Functional site
|
|
|
1)
|
chain |
A |
| residue |
5 |
| type |
|
| sequence |
G
|
| description |
binding site for residue HMV A 101
|
| source |
: AC1
|
|
|
2)
|
chain |
A |
| residue |
6 |
| type |
|
| sequence |
U
|
| description |
binding site for residue HMV A 101
|
| source |
: AC1
|
|
|
3)
|
chain |
A |
| residue |
7 |
| type |
|
| sequence |
C
|
| description |
binding site for residue HMV A 101
|
| source |
: AC1
|
|
|
4)
|
chain |
A |
| residue |
11 |
| type |
|
| sequence |
G
|
| description |
binding site for residue HMV A 101
|
| source |
: AC1
|
|
|
5)
|
chain |
A |
| residue |
14 |
| type |
|
| sequence |
X
|
| description |
binding site for residue HMV A 101
|
| source |
: AC1
|
|
|
6)
|
chain |
A |
| residue |
16 |
| type |
|
| sequence |
C
|
| description |
binding site for residue HMV A 101
|
| source |
: AC1
|
|
|
7)
|
chain |
A |
| residue |
29 |
| type |
|
| sequence |
A
|
| description |
binding site for residue HMV A 101
|
| source |
: AC1
|
|
|
|