eF-site ID 6dyy-A
PDB Code 6dyy
Chain A

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Title Crystal structure of Helicobacter pylori 5'-methylthioadenosine/S-adenosyl homocysteine nucleosidase (MTAN) complexed with (3R,4S)-1-((4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl)-4-(((3-(1-butyl-1H-1,2,3-triazol-4-yl)propyl)thio)methyl)pyrrolidin-3-ol
Classification HYDROLASE/HYDROLASE INHIBITOR
Compound 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
Source (A0A1W0VQJ9_HELPX)
Sequence A:  QGVQKIGILGAMREEITPILELFGVDFEEIPLGGNVFHKG
VYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGV
AGSLVKDLKINDLLVATQLVQHDVDLSAFDHPLGFIPESA
IFIETSGSLNALAKKIANEQHIALKEGVIASGDQFVHSKE
RKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISD
NADEKAGMSFDEFLEKSAHTSAKFLKSMVDEL
Description


Functional site

1) chain A
residue 123
type
sequence T
description binding site for residue EDO A 301
source : AC1

2) chain A
residue 125
type
sequence G
description binding site for residue EDO A 301
source : AC1

3) chain A
residue 126
type
sequence S
description binding site for residue EDO A 301
source : AC1

4) chain A
residue 229
type
sequence E
description binding site for residue MG A 302
source : AC2

5) chain A
residue 52
type
sequence I
description binding site for residue OS6 A 303
source : AC3

6) chain A
residue 78
type
sequence V
description binding site for residue OS6 A 303
source : AC3

7) chain A
residue 79
type
sequence A
description binding site for residue OS6 A 303
source : AC3

8) chain A
residue 80
type
sequence G
description binding site for residue OS6 A 303
source : AC3

9) chain A
residue 152
type
sequence Q
description binding site for residue OS6 A 303
source : AC3

10) chain A
residue 153
type
sequence F
description binding site for residue OS6 A 303
source : AC3

11) chain A
residue 154
type
sequence V
description binding site for residue OS6 A 303
source : AC3

12) chain A
residue 172
type
sequence V
description binding site for residue OS6 A 303
source : AC3

13) chain A
residue 173
type
sequence E
description binding site for residue OS6 A 303
source : AC3

14) chain A
residue 174
type
sequence M
description binding site for residue OS6 A 303
source : AC3

15) chain A
residue 175
type
sequence E
description binding site for residue OS6 A 303
source : AC3

16) chain A
residue 197
type
sequence S
description binding site for residue OS6 A 303
source : AC3

17) chain A
residue 198
type
sequence D
description binding site for residue OS6 A 303
source : AC3

18) chain A
residue 200
type
sequence A
description binding site for residue OS6 A 303
source : AC3

19) chain A
residue 208
type
sequence F
description binding site for residue OS6 A 303
source : AC3

20) chain A
residue 106
type
sequence A
description binding site for residue EDO B 302
source : AC5

21) chain A
residue 107
type
sequence F
description binding site for residue EDO B 302
source : AC5

22) chain A
residue 104
type
sequence L
description binding site for residue OS6 B 305
source : AC8

23) chain A
residue 109
type
sequence H
description binding site for residue OS6 B 305
source : AC8

24) chain A
residue 115
type
sequence P
description binding site for residue OS6 B 305
source : AC8

25) chain A
residue 157
type
sequence K
description binding site for residue EDO C 302
source : AD1

26) chain A
residue 122
type
sequence E
description binding site for residue OS6 C 303
source : AD2

27) chain A
residue 80
type BINDING
sequence G
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI3

28) chain A
residue 154
type BINDING
sequence V
description
source Swiss-Prot : SWS_FT_FI4

29) chain A
residue 174
type BINDING
sequence M
description
source Swiss-Prot : SWS_FT_FI4

30) chain A
residue 13
type ACT_SITE
sequence E
description Proton acceptor => ECO:0000305|PubMed:20954236
source Swiss-Prot : SWS_FT_FI1

31) chain A
residue 198
type ACT_SITE
sequence D
description Proton donor => ECO:0000305|PubMed:20954236
source Swiss-Prot : SWS_FT_FI2


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