|
eF-site ID
|
6dve-C |
PDB Code
|
6dve |
Chain
|
C |
|
click to enlarge
|
|
Title
|
Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF selenomethionine-labelled sigma factor L) with 6 nt spacer |
Classification
|
TRANSFERASE/DNA |
Compound
|
DNA-directed RNA polymerase subunit alpha |
Source
|
(6DVE) |
|
Sequence
|
C: |
SNNSVPGAPNRVSFAKLREPLEVPGLLDVQTDSFEWLIGS
PRWRESAAERGDVNPVGGLEEVLYELSPIEDFSGSMSLSF
SDPRFDDVKAPVDECKDKDMTYAAPLFVTAEFINNNTGEI
KSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVYF
DETIDKSTDKTLHSVKVIPSRGAWLEFDVDKRDTVGVRID
RKRRQPVTVLLKALGWTSEQIVERFGFSEIMRSTLEKDNT
VGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYD
LARVGRYKVNKKLGLHVGEPITSSTLTEEDVVATIEYLVR
LHEGQTTMTVPGGVEVPVETDDIDHFGNRRLRTVGELIQN
QIRVGMSRMERVVRERMTTQDVEAITPQTLINIRPVVAAI
KEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRER
AGLEVRDVHPSHYGRMCPIETPEGPNIGLIGSLSVYARVN
PFGFIETPYRKVVDGVVSDEIVYLTADEEDRHVVAQANSP
IDADGRFVEPRVLVRRKAGEVEYVPSSEVDYMDVSPRQMV
SVATAMIPFLEHDDANRALMGANMQRQAVPLVRSEAPLVG
TGMELRAAIDAGDVVVAEESGVIEEVSADYITVMHDNGTR
RTYRMRKFARSNHGTCANQCPIVDAGDRVEAGQVIADGPC
TDDGEMALGKNLLVAIMPWEGHNYEDAIILSNRLVEEDVL
TSIHIEEHEIDARDTKLGAEEITRDIPNISDEVLADLDER
GIVRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGE
KAREVRDTSLKVPHGESGKVIGIRVFSREDEDELPAGVNE
LVRVYVAQKRKISDGDKLAGRHGNKGVIGKILPVEDMPFL
ADGTPVDIILNTHGVPRRMNIGQILETHLGWCAHSGWKVD
AAKGVPDWAARLPDELLEAQPNAIVSTPVFDGAQEAELQG
LLSCTLPNRDGDVLVDADGKAMLFDGRSGEPFPYPVTVGY
MYIMKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQR
FGEMECWAMQAYGAAYTLQELLTIKSDDTVGRVKVYEAIV
KGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIEL
REGEDE
|
|
Description
|
(1) |
DNA-directed RNA polymerase/ECF RNA polymerase sigma factor SigL/DNA Complex
|
|
Functional site
|
|
1)
|
chain |
C |
residue |
882-894 |
type |
prosite |
sequence |
GDKLAGRHGNKGV
|
description |
RNA_POL_BETA RNA polymerases beta chain signature. GdKLAGrHGNKGV
|
source |
prosite : PS01166
|
|
|
|