eF-site ID 6dta-AB PDB Code 6dta Chain A, B click to enlarge Title Bacteriophage N4 RNA polymerase II elongation complex 2 Classification transcription/dna/rna Compound RNAP1 Source (6DTA) Sequence A:  STIEHQMHLEKLYNKNQLLPRMRQEFEENSGIDFKAFFAH IGIDYKFGIDAMVQMALHKRADLPTLVGTLRHHCKSAQEV ADNLFKMASEDCFNFDPTIDKFIVIYTISDDVQHELDSFQ YPLPMVVRPKLLTKNYGTGYFTCNKSVILKKNHTDDDICL DHLNRMNKIPLSINWDVAHMVKNEWANLFQKYDRTAHEVM GLLTQEGNKFYLTHRPDKRGRTYSQGYHVNYQGTSWNKAV LEFAEKEVID B:  MQTFTAREYLKIDIANNYGLDKEDWDDRIAWFDKNENNLL NLVREAEEPALFYAGVKAWMDVKEGKPIGYPVALDATSSG LQILACLTGDRRAAELCNVVNYRDESGKVKRRDAYTVIYN KMLNTLGKGARIKRNDCKQAIMTALYGSEAKPKEVFGEGI MLNVFESTMNVEAPAVWELNKFWLQCGNPEAFVYHWVMPD GFNVYIKVMVNEVETVHFLDKPYDCVRKVQGTEEKTRMLS ANTTHSIDGLVVRELVRRCDYDKNQIEYIKALCNGEAEYK ASEKNYGKAMELWGYYEKTGFLTARIFDYLDSETIKLVNT QDILDLIESMPKKPFHVLTVHDCFRCLPNYGNDIRRQYNN LLATIAKGDLLSFIMSQVIGQEVTIGKLDPTLWEDVLETE YALS Description Functional site 1) chain B residue 80 type sequence G description binding site for residue GTP B 1001 source : AC1 2) chain B residue 115 type sequence Y description binding site for residue GTP B 1001 source : AC1 3) chain B residue 138 type sequence K description binding site for residue GTP B 1001 source : AC1 4) chain B residue 142 type sequence M description binding site for residue GTP B 1001 source : AC1 5) chain B residue 146 type sequence Y description binding site for residue GTP B 1001 source : AC1 6) chain B residue 245 type sequence H description binding site for residue GTP B 1001 source : AC1 7) chain B residue 342 type sequence D description binding site for residue GTP B 1001 source : AC1 8) chain B residue 132-146 type prosite sequence IKRNDCKQAIMTALY description RNA_POL_PHAGE_2 Bacteriophage-type RNA polymerase family active site signature 2. IkRndcKqaIMTalY source prosite : PS00489

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