eF-site ID 6drd-J
PDB Code 6drd
Chain J

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Title RNA Pol II(G)
Classification TRANSFERASE
Compound DNA-directed RNA polymerase II subunit RPB1
Source ORGANISM_COMMON: Human; ORGANISM_SCIENTIFIC: Homo sapiens;
Sequence J:  MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGL
KRYCCRRMLLAHVDLIEKLLNYAP
Description (1)  DNA-directed RNA polymerase II subunit RPB1 (E.C.2.7.7.6,2.7.7.48), DNA-directed RNA polymerase II subunit RPB2 (E.C.2.7.7.6), DNA-directed RNA polymerase II subunit RPB3, DNA-directed RNA polymerase II subunit RPB4, DNA-directed RNA polymerases I, II, and III subunit RPABC1, DNA-directed RNA polymerases I, II, and III subunit RPABC2, DNA-directed RNA polymerase II subunit RPB7, DNA-directed RNA polymerases I, II, and III subunit RPABC3, DNA-directed RNA polymerase II subunit RPB9, DNA-directed RNA polymerases I, II, and III subunit RPABC5, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerases I, II, and III subunit RPABC4, Gdown1,DNA-directed RNA polymerase II subunit GRINL1A


Functional site

1) chain J
residue 7
type
sequence C
description binding site for residue ZN J 101
source : AC4

2) chain J
residue 10
type
sequence C
description binding site for residue ZN J 101
source : AC4

3) chain J
residue 44
type
sequence C
description binding site for residue ZN J 101
source : AC4

4) chain J
residue 45
type
sequence C
description binding site for residue ZN J 101
source : AC4

5) chain J
residue 10
type ZN_FING
sequence C
description C4-type => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

6) chain J
residue 44
type ZN_FING
sequence C
description C4-type => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

7) chain J
residue 2-11
type prosite
sequence IIPVRCFTCG
description RNA_POL_N_8KD RNA polymerases N / 8 Kd subunits signature. IIPVrCFTCG
source prosite : PS01112


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