eF-site ID 6dn8-ACEF
PDB Code 6dn8
Chain A, C, E, F

click to enlarge
Title SPRY domain-containing SOCS box protein 2 complexed with (GZJ)VDINNN(CY3) Cyclic peptide inhibitor
Classification IMMUNE SYSTEM/INHIBITOR
Compound SPRY domain-containing SOCS box protein 4
Source (6DN8)
Sequence A:  RPARLDQLLDMPAAGLAVQLRHAWNPEDRSLNVFVKDDDR
LTFHRHPVAQSTDGIRGKVGHARGLHAWQINWPARQRGTH
AVVGVATARAPLHSVGYTALVGSDAESWGWDLGRSRLYHD
GKNQPGVAYPAFLFALPDSLLVVLDMDEGTLSFIVDGQYL
GVAFRGLKGKKLYPVVSAVWGHCEVTMRYINGLDP
C:  ARLDQLLDMPAAGLAVQLRHAWNPEDRSLNVFVKDDDRLT
FHRHPVAQSTDGIRGKVGHARGLHAWQINWPARQRGTHAV
VGVATARAPLHSVGYTALVGSDAESWGWDLGRSRLYHDGK
NQPGVAYPAFLGPDEAFALPDSLLVVLDMDEGTLSFIVDG
QYLGVAFRGLKGKKLYPVVSAVWGHCEVTMRYINGLDP
E:  RPARLDQLLDMPAAGLAVQLRHAWNPEDRSLNVFVKDDDR
LTFHRHPVAQSTDGIRGKVGHARGLHAWQINWPARQRGTH
AVVGVATARAPLHSVGYTALVGSDAESWGWDLGRSRLYHD
GKNQPGVAYPAFEAFALPDSLLVVLDMDEGTLSFIVDGQY
LGVAFRGLKGKKLYPVVSAVWGHCEVTMRYINGLDP
F:  VDINNNX
Description


Functional site

1) chain A
residue 62
type
sequence S
description binding site for residue ACT A 301
source : AC1

2) chain A
residue 63
type
sequence L
description binding site for residue ACT A 301
source : AC1

3) chain A
residue 125
type
sequence H
description binding site for residue ACT A 301
source : AC1

4) chain C
residue 101
type
sequence Q
description binding site for residue ACT A 301
source : AC1

5) chain A
residue 148
type
sequence R
description binding site for residue SO4 A 302
source : AC2

6) chain A
residue 150
type
sequence Y
description binding site for residue SO4 A 302
source : AC2

7) chain A
residue 157
type
sequence P
description binding site for residue SO4 A 302
source : AC2

8) chain A
residue 158
type
sequence G
description binding site for residue SO4 A 302
source : AC2

9) chain C
residue 207
type
sequence K
description binding site for residue SO4 A 302
source : AC2

10) chain C
residue 121
type
sequence R
description binding site for residue ACT C 301
source : AC3

11) chain C
residue 207
type
sequence K
description binding site for residue ACT C 301
source : AC3

12) chain C
residue 208
type
sequence K
description binding site for residue ACT C 301
source : AC3

13) chain C
residue 53
type
sequence R
description binding site for residue SO4 C 302
source : AC4

14) chain C
residue 54
type
sequence H
description binding site for residue SO4 C 302
source : AC4

15) chain C
residue 76
type
sequence H
description binding site for residue SO4 C 303
source : AC5

16) chain C
residue 76
type
sequence H
description binding site for residue SO4 C 303
source : AC5

17) chain C
residue 219
type
sequence H
description binding site for residue SO4 C 303
source : AC5

18) chain C
residue 219
type
sequence H
description binding site for residue SO4 C 303
source : AC5

19) chain E
residue 50
type
sequence V
description binding site for residue ACT E 301
source : AC6

20) chain E
residue 53
type
sequence R
description binding site for residue ACT E 301
source : AC6

21) chain E
residue 54
type
sequence H
description binding site for residue ACT E 301
source : AC6

22) chain A
residue 185
type
sequence E
description binding site for residues CY3 B 101 and GZJ B 1
source : AC7

23) chain A
residue 231
type
sequence D
description binding site for Di-peptide CY3 D 101 and ASN D 7
source : AC9

24) chain C
residue 77
type
sequence R
description binding site for Di-peptide CY3 D 101 and ASN D 7
source : AC9

25) chain C
residue 79
type
sequence P
description binding site for Di-peptide CY3 D 101 and ASN D 7
source : AC9

26) chain C
residue 80
type
sequence V
description binding site for Di-peptide CY3 D 101 and ASN D 7
source : AC9

27) chain C
residue 81
type
sequence A
description binding site for Di-peptide CY3 D 101 and ASN D 7
source : AC9

28) chain C
residue 129
type
sequence Y
description binding site for Di-peptide CY3 D 101 and ASN D 7
source : AC9

29) chain C
residue 216
type
sequence V
description binding site for Di-peptide CY3 D 101 and ASN D 7
source : AC9

30) chain C
residue 218
type
sequence G
description binding site for Di-peptide CY3 D 101 and ASN D 7
source : AC9

31) chain A
residue 231
type
sequence D
description binding site for residues CY3 D 101 and GZJ D 1
source : AD1

32) chain E
residue 77
type
sequence R
description binding site for Di-peptide CY3 F 101 and ASN F 7
source : AD2

33) chain E
residue 79
type
sequence P
description binding site for Di-peptide CY3 F 101 and ASN F 7
source : AD2

34) chain E
residue 80
type
sequence V
description binding site for Di-peptide CY3 F 101 and ASN F 7
source : AD2

35) chain E
residue 81
type
sequence A
description binding site for Di-peptide CY3 F 101 and ASN F 7
source : AD2

36) chain E
residue 129
type
sequence Y
description binding site for Di-peptide CY3 F 101 and ASN F 7
source : AD2

37) chain E
residue 216
type
sequence V
description binding site for Di-peptide CY3 F 101 and ASN F 7
source : AD2

38) chain E
residue 218
type
sequence G
description binding site for Di-peptide CY3 F 101 and ASN F 7
source : AD2

39) chain F
residue 2
type
sequence V
description binding site for Di-peptide CY3 F 101 and ASN F 7
source : AD2

40) chain F
residue 3
type
sequence D
description binding site for Di-peptide CY3 F 101 and ASN F 7
source : AD2

41) chain F
residue 5
type
sequence N
description binding site for Di-peptide CY3 F 101 and ASN F 7
source : AD2

42) chain F
residue 6
type
sequence N
description binding site for Di-peptide CY3 F 101 and ASN F 7
source : AD2

43) chain A
residue 130-144
type prosite
sequence TALVGSDAESWGWDL
description WD_REPEATS_1 Trp-Asp (WD) repeats signature. TALVgsDaESWGWDL
source prosite : PS00678


Display surface

Download
Links