eF-site ID 6dki-A
PDB Code 6dki
Chain A

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Title Crystal structure of Trk-A in complex with the Pan-Trk Kinase Inhibitor, compound 19.
Classification TRANSFERASE/TRANSFERASE INHIBITOR
Compound High affinity nerve growth factor receptor
Source (NTRK1_HUMAN)
Sequence A:  ACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKM
LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVC
TEGRPLLMVFEYMRHGDLNRFLRSHGPDGPLGLGQLLAVA
SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGR
DIYSTDYYRTMLPIRWMPPESILYRKFTTESDVWSFGVVL
WEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVY
AIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLDVLG
Description


Functional site

1) chain A
residue 513
type
sequence K
description binding site for residue 22L A 801
source : AC1

2) chain A
residue 514
type
sequence W
description binding site for residue 22L A 801
source : AC1

3) chain A
residue 515
type
sequence E
description binding site for residue 22L A 801
source : AC1

4) chain A
residue 525
type
sequence F
description binding site for residue 22L A 801
source : AC1

5) chain A
residue 545
type
sequence A
description binding site for residue 22L A 801
source : AC1

6) chain A
residue 547
type
sequence K
description binding site for residue 22L A 801
source : AC1

7) chain A
residue 524
type
sequence V
description binding site for residue GOD A 802
source : AC2

8) chain A
residue 542
type
sequence A
description binding site for residue GOD A 802
source : AC2

9) chain A
residue 564
type
sequence L
description binding site for residue GOD A 802
source : AC2

10) chain A
residue 567
type
sequence L
description binding site for residue GOD A 802
source : AC2

11) chain A
residue 589
type
sequence F
description binding site for residue GOD A 802
source : AC2

12) chain A
residue 590
type
sequence E
description binding site for residue GOD A 802
source : AC2

13) chain A
residue 592
type
sequence M
description binding site for residue GOD A 802
source : AC2

14) chain A
residue 641
type
sequence L
description binding site for residue GOD A 802
source : AC2

15) chain A
residue 657
type
sequence L
description binding site for residue GOD A 802
source : AC2

16) chain A
residue 666
type
sequence I
description binding site for residue GOD A 802
source : AC2

17) chain A
residue 667
type
sequence G
description binding site for residue GOD A 802
source : AC2

18) chain A
residue 668
type
sequence D
description binding site for residue GOD A 802
source : AC2

19) chain A
residue 669
type
sequence F
description binding site for residue GOD A 802
source : AC2

20) chain A
residue 594
type MOD_RES
sequence H
description Phosphotyrosine; by autocatalysis => ECO:0000269|PubMed:15488758, ECO:0000269|PubMed:27676246, ECO:0000269|PubMed:8155326
source Swiss-Prot : SWS_FT_FI7

21) chain A
residue 748
type ACT_SITE
sequence R
description Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000255|PROSITE-ProRule:PRU10028
source Swiss-Prot : SWS_FT_FI2

22) chain A
residue 584
type SITE
sequence P
description Breakpoint for translocation to form TRK-T1
source Swiss-Prot : SWS_FT_FI5

23) chain A
residue 594
type SITE
sequence H
description Interaction with SHC1
source Swiss-Prot : SWS_FT_FI6

24) chain A
residue 522-537
type TRANSMEM
sequence GKVFLAECHNLLPEQD
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

25) chain A
residue 642
type BINDING
sequence A
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159
source Swiss-Prot : SWS_FT_FI3

26) chain A
residue 774
type MOD_RES
sequence I
description Phosphotyrosine; by autocatalysis => ECO:0000269|PubMed:8155326
source Swiss-Prot : SWS_FT_FI8

27) chain A
residue 778
type MOD_RES
sequence H
description Phosphotyrosine; by autocatalysis => ECO:0000269|PubMed:15488758, ECO:0000269|PubMed:8155326
source Swiss-Prot : SWS_FT_FI9

28) chain A
residue 779
type MOD_RES
sequence A
description Phosphotyrosine; by autocatalysis => ECO:0000269|PubMed:15488758, ECO:0000269|PubMed:8155326
source Swiss-Prot : SWS_FT_FI9

29) chain A
residue 516-544
type prosite
sequence LGEGAFGKVFLAECHNLLPEQDKMLVAVK
description PROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. LGEGAFGKVFlAechnllpeqdkml.....VAVK
source prosite : PS00107

30) chain A
residue 646-658
type prosite
sequence FVHRDLATRNCLV
description PROTEIN_KINASE_TYR Tyrosine protein kinases specific active-site signature. FVHrDLATRNCLV
source prosite : PS00109

31) chain A
residue 674-682
type prosite
sequence DIYSTDYYR
description RECEPTOR_TYR_KIN_II Receptor tyrosine kinase class II signature. DIYstdYYR
source prosite : PS00239


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