eF-site ID 6dhh-z
PDB Code 6dhh
Chain z

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Title RT XFEL structure of Photosystem II 400 microseconds after the second illumination at 2.2 Angstrom resolution
Classification PHOTOSYNTHESIS
Compound Photosystem II protein D1 1
Source ORGANISM_SCIENTIFIC: Thermosynechococcus elongatus (strain BP-1);
Sequence z:  MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSKQLI
FLGSGLWIALVLVVGVLNFFVV
Description


Functional site

1) chain z
residue 20
type
sequence V
description binding site for residue CLA c 511
source : AP8

2) chain z
residue 51
type
sequence V
description binding site for residue BCR c 514
source : AQ2

3) chain z
residue 16
type
sequence S
description binding site for residue BCR c 521
source : AQ8

4) chain z
residue 16
type
sequence S
description binding site for residue BCR y 101
source : AT1

5) chain z
residue 17
type
sequence F
description binding site for residue BCR y 101
source : AT1

6) chain z
residue 5-25
type TRANSMEM
sequence FQLALAALVILSFVMVIGVPV
description Helical => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ
source Swiss-Prot : SWS_FT_FI2

7) chain z
residue 37-58
type TRANSMEM
sequence KQLIFLGSGLWIALVLVVGVLN
description Helical => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ
source Swiss-Prot : SWS_FT_FI2

8) chain z
residue 59-62
type TOPO_DOM
sequence FFVV
description Lumenal => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ
source Swiss-Prot : SWS_FT_FI4

9) chain z
residue 26-36
type TOPO_DOM
sequence AYASPQDWDRS
description Cytoplasmic => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ
source Swiss-Prot : SWS_FT_FI3

10) chain z
residue 1
type MOD_RES
sequence M
description N-formylmethionine => ECO:0000269|PubMed:19219048, ECO:0000269|PubMed:20558739
source Swiss-Prot : SWS_FT_FI5


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