eF-site ID 6dhh-b PDB Code 6dhh Chain b click to enlarge Title RT XFEL structure of Photosystem II 400 microseconds after the second illumination at 2.2 Angstrom resolution Classification PHOTOSYNTHESIS Compound Photosystem II protein D1 1 Source ORGANISM_SCIENTIFIC: Thermosynechococcus elongatus (strain BP-1); Sequence b:  GLPWYRVHTVLINDPGRLIAAHLMHTALVAGWAGSMALYE LATFDPSDPVLNPMWRQGMFVLPFMARLGVTGSWSGWSIT GETGIDPGFWSFEGVALAHIVLSGLLFLAACWHWVYWDLE LFRDPRTGEPALDLPKMFGIHLFLAGLLCFGFGAFHLTGL FGPGMWVSDPYGLTGSVQPVAPEWGPDGFNPYNPGGVVAH HIAAGIVGIIAGLFHILVRPPQRLYKALRMGNIETVLSSS IAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDSSYFQ QEINRRVQASLASGATLEEAWSAIPEKLAFYDYIGNNPAK GGLFRTGPMNKGDGIAQAWKGHAVFRNKEGEELFVRRMPA FFESFPVILTDKNGVVKADIPFRRAESKYSFEQQGVTVSF YGGELNGQTFTDPPTVKSYARKAIFGEIFEFDTETLNSDG IFRTSPRGWFTFAHAVFALLFFFGHIWHGARTLFRDVFSG IDPELSPEQVEWGFYQKVGDVTTRR Description Functional site 1) chain b residue 106 type sequence L description binding site for residue SQD A 412 source : AD3 2) chain b residue 75 type sequence W description binding site for residue DGD A 413 source : AD4 3) chain b residue 76 type sequence S description binding site for residue DGD A 413 source : AD4 4) chain b residue 33 type sequence W description binding site for residue BCR T 101 source : AK4 5) chain b residue 37 type sequence M description binding site for residue BCR T 101 source : AK4 6) chain b residue 6 type sequence Y description binding site for residue LHG a 410 source : AL6 7) chain b residue 7 type sequence R description binding site for residue LHG a 410 source : AL6 8) chain b residue 468 type sequence W description binding site for residue LHG a 410 source : AL6 9) chain b residue 18 type sequence R description binding site for residue SQD b 601 source : AM4 10) chain b residue 104 type sequence S description binding site for residue SQD b 601 source : AM4 11) chain b residue 115 type sequence W description binding site for residue SQD b 601 source : AM4 12) chain b residue 189 type sequence G description binding site for residue CLA b 603 source : AM5 13) chain b residue 190 type sequence F description binding site for residue CLA b 603 source : AM5 14) chain b residue 192 type sequence P description binding site for residue CLA b 603 source : AM5 15) chain b residue 200 type sequence A description binding site for residue CLA b 603 source : AM5 16) chain b residue 201 type sequence H description binding site for residue CLA b 603 source : AM5 17) chain b residue 247 type sequence F description binding site for residue CLA b 603 source : AM5 18) chain b residue 68 type sequence R description binding site for residue CLA b 604 source : AM6 19) chain b residue 69 type sequence L description binding site for residue CLA b 604 source : AM6 20) chain b residue 146 type sequence A description binding site for residue CLA b 604 source : AM6 21) chain b residue 150 type sequence C description binding site for residue CLA b 604 source : AM6 22) chain b residue 153 type sequence F description binding site for residue CLA b 604 source : AM6 23) chain b residue 201 type sequence H description binding site for residue CLA b 604 source : AM6 24) chain b residue 202 type sequence H description binding site for residue CLA b 604 source : AM6 25) chain b residue 262 type sequence T description binding site for residue CLA b 604 source : AM6 26) chain b residue 33 type sequence W description binding site for residue CLA b 605 source : AM7 27) chain b residue 61 type sequence F description binding site for residue CLA b 605 source : AM7 28) chain b residue 65 type sequence F description binding site for residue CLA b 605 source : AM7 29) chain b residue 68 type sequence R description binding site for residue CLA b 605 source : AM7 30) chain b residue 245 type sequence V description binding site for residue CLA b 605 source : AM7 31) chain b residue 248 type sequence A description binding site for residue CLA b 605 source : AM7 32) chain b residue 252 type sequence V description binding site for residue CLA b 605 source : AM7 33) chain b residue 451 type sequence F description binding site for residue CLA b 605 source : AM7 34) chain b residue 455 type sequence H description binding site for residue CLA b 605 source : AM7 35) chain b residue 458 type sequence F description binding site for residue CLA b 605 source : AM7 36) chain b residue 462 type sequence F description binding site for residue CLA b 605 source : AM7 37) chain b residue 30 type sequence V description binding site for residue CLA b 606 source : AM8 38) chain b residue 31 type sequence A description binding site for residue CLA b 606 source : AM8 39) chain b residue 34 type sequence A description binding site for residue CLA b 606 source : AM8 40) chain b residue 62 type sequence V description binding site for residue CLA b 606 source : AM8 41) chain b residue 66 type sequence M description binding site for residue CLA b 606 source : AM8 42) chain b residue 96 type sequence V description binding site for residue CLA b 606 source : AM8 43) chain b residue 100 type sequence H description binding site for residue CLA b 606 source : AM8 44) chain b residue 103 type sequence L description binding site for residue CLA b 606 source : AM8 45) chain b residue 143 type sequence L description binding site for residue CLA b 606 source : AM8 46) chain b residue 205 type sequence A description binding site for residue CLA b 606 source : AM8 47) chain b residue 71 type sequence V description binding site for residue CLA b 607 source : AM9 48) chain b residue 91 type sequence W description binding site for residue CLA b 607 source : AM9 49) chain b residue 96 type sequence V description binding site for residue CLA b 607 source : AM9 50) chain b residue 99 type sequence A description binding site for residue CLA b 607 source : AM9 51) chain b residue 149 type sequence L description binding site for residue CLA b 607 source : AM9 52) chain b residue 152 type sequence G description binding site for residue CLA b 607 source : AM9 53) chain b residue 153 type sequence F description binding site for residue CLA b 607 source : AM9 54) chain b residue 156 type sequence F description binding site for residue CLA b 607 source : AM9 55) chain b residue 157 type sequence H description binding site for residue CLA b 607 source : AM9 56) chain b residue 162 type sequence F description binding site for residue CLA b 607 source : AM9 57) chain b residue 163 type sequence G description binding site for residue CLA b 607 source : AM9 58) chain b residue 164 type sequence P description binding site for residue CLA b 607 source : AM9 59) chain b residue 33 type sequence W description binding site for residue CLA b 608 source : AN1 60) chain b residue 40 type sequence Y description binding site for residue CLA b 608 source : AN1 61) chain b residue 58 type sequence Q description binding site for residue CLA b 608 source : AN1 62) chain b residue 59 type sequence G description binding site for residue CLA b 608 source : AN1 63) chain b residue 61 type sequence F description binding site for residue CLA b 608 source : AN1 64) chain b residue 324 type sequence L description binding site for residue CLA b 608 source : AN1 65) chain b residue 327 type sequence T description binding site for residue CLA b 608 source : AN1 66) chain b residue 328 type sequence G description binding site for residue CLA b 608 source : AN1 67) chain b residue 329 type sequence P description binding site for residue CLA b 608 source : AN1 68) chain b residue 450 type sequence W description binding site for residue CLA b 608 source : AN1 69) chain b residue 229 type sequence L description binding site for residue CLA b 609 source : AN2 70) chain b residue 236 type sequence T description binding site for residue CLA b 609 source : AN2 71) chain b residue 239 type sequence S description binding site for residue CLA b 609 source : AN2 72) chain b residue 463 type sequence F description binding site for residue CLA b 609 source : AN2 73) chain b residue 466 type sequence H description binding site for residue CLA b 609 source : AN2 74) chain b residue 467 type sequence I description binding site for residue CLA b 609 source : AN2 75) chain b residue 139 type sequence F description binding site for residue CLA b 610 source : AN3 76) chain b residue 212 type sequence A description binding site for residue CLA b 610 source : AN3 77) chain b residue 215 type sequence F description binding site for residue CLA b 610 source : AN3 78) chain b residue 216 type sequence H description binding site for residue CLA b 610 source : AN3 79) chain b residue 219 type sequence V description binding site for residue CLA b 610 source : AN3 80) chain b residue 221 type sequence P description binding site for residue CLA b 610 source : AN3 81) chain b residue 222 type sequence P description binding site for residue CLA b 610 source : AN3 82) chain b residue 225 type sequence L description binding site for residue CLA b 610 source : AN3 83) chain b residue 229 type sequence L description binding site for residue CLA b 610 source : AN3 84) chain b residue 135 type sequence L description binding site for residue CLA b 611 source : AN4 85) chain b residue 139 type sequence F description binding site for residue CLA b 611 source : AN4 86) chain b residue 142 type sequence H description binding site for residue CLA b 611 source : AN4 87) chain b residue 143 type sequence L description binding site for residue CLA b 611 source : AN4 88) chain b residue 146 type sequence A description binding site for residue CLA b 611 source : AN4 89) chain b residue 231 type sequence M description binding site for residue CLA b 611 source : AN4 90) chain b residue 237 type sequence V description binding site for residue CLA b 611 source : AN4 91) chain b residue 240 type sequence S description binding site for residue CLA b 611 source : AN4 92) chain b residue 241 type sequence S description binding site for residue CLA b 611 source : AN4 93) chain b residue 6 type sequence Y description binding site for residue CLA b 612 source : AN5 94) chain b residue 7 type sequence R description binding site for residue CLA b 612 source : AN5 95) chain b residue 8 type sequence V description binding site for residue CLA b 612 source : AN5 96) chain b residue 9 type sequence H description binding site for residue CLA b 612 source : AN5 97) chain b residue 238 type sequence L description binding site for residue CLA b 612 source : AN5 98) chain b residue 462 type sequence F description binding site for residue CLA b 612 source : AN5 99) chain b residue 465 type sequence G description binding site for residue CLA b 612 source : AN5 100) chain b residue 468 type sequence W description binding site for residue CLA b 612 source : AN5 101) chain b residue 469 type sequence H description binding site for residue CLA b 612 source : AN5 102) chain b residue 472 type sequence R description binding site for residue CLA b 612 source : AN5 103) chain b residue 9 type sequence H description binding site for residue CLA b 613 source : AN6 104) chain b residue 19 type sequence L description binding site for residue CLA b 613 source : AN6 105) chain b residue 23 type sequence H description binding site for residue CLA b 613 source : AN6 106) chain b residue 26 type sequence H description binding site for residue CLA b 613 source : AN6 107) chain b residue 27 type sequence T description binding site for residue CLA b 613 source : AN6 108) chain b residue 237 type sequence V description binding site for residue CLA b 613 source : AN6 109) chain b residue 238 type sequence L description binding site for residue CLA b 613 source : AN6 110) chain b residue 241 type sequence S description binding site for residue CLA b 613 source : AN6 111) chain b residue 9 type sequence H description binding site for residue CLA b 614 source : AN7 112) chain b residue 26 type sequence H description binding site for residue CLA b 614 source : AN7 113) chain b residue 462 type sequence F description binding site for residue CLA b 614 source : AN7 114) chain b residue 8 type sequence V description binding site for residue CLA b 615 source : AN8 115) chain b residue 9 type sequence H description binding site for residue CLA b 615 source : AN8 116) chain b residue 29 type sequence L description binding site for residue CLA b 615 source : AN8 117) chain b residue 23 type sequence H description binding site for residue CLA b 616 source : AN9 118) chain b residue 24 type sequence L description binding site for residue CLA b 616 source : AN9 119) chain b residue 138 type sequence M description binding site for residue CLA b 616 source : AN9 120) chain b residue 141 type sequence I description binding site for residue CLA b 616 source : AN9 121) chain b residue 142 type sequence H description binding site for residue CLA b 616 source : AN9 122) chain b residue 145 type sequence L description binding site for residue CLA b 616 source : AN9 123) chain b residue 24 type sequence L description binding site for residue CLA b 617 source : AO1 124) chain b residue 110 type sequence A description binding site for residue CLA b 617 source : AO1 125) chain b residue 113 type sequence W description binding site for residue CLA b 617 source : AO1 126) chain b residue 114 type sequence H description binding site for residue CLA b 617 source : AO1 127) chain b residue 25 type sequence M description binding site for residue BCR b 618 source : AO2 128) chain b residue 115 type sequence W description binding site for residue BCR b 618 source : AO2 129) chain b residue 32 type sequence G description binding site for residue BCR b 619 source : AO3 130) chain b residue 36 type sequence S description binding site for residue BCR b 619 source : AO3 131) chain b residue 101 type sequence I description binding site for residue BCR b 619 source : AO3 132) chain b residue 102 type sequence V description binding site for residue BCR b 619 source : AO3 133) chain b residue 105 type sequence G description binding site for residue BCR b 619 source : AO3 134) chain b residue 117 type sequence Y description binding site for residue BCR b 620 source : AO4 135) chain b residue 159 type sequence T description binding site for residue LMG b 622 source : AO5 136) chain b residue 182 type sequence A description binding site for residue LMG b 622 source : AO5 137) chain b residue 185 type sequence W description binding site for residue LMG b 622 source : AO5 138) chain b residue 207 type sequence I description binding site for residue LMG b 622 source : AO5 139) chain b residue 224 type sequence R description binding site for residue LMG b 623 source : AO6 140) chain b residue 225 type sequence L description binding site for residue LMG b 623 source : AO6 141) chain b residue 228 type sequence A description binding site for residue LMG b 623 source : AO6 142) chain b residue 183 type sequence P description binding site for residue LMG c 522 source : AQ9 143) chain b residue 184 type sequence E description binding site for residue LMG c 522 source : AQ9 144) chain b residue 185 type sequence W description binding site for residue LMG c 522 source : AQ9 145) chain b residue 185 type sequence W description binding site for residue CLA h 101 source : AS4 146) chain b residue 187 type sequence P description binding site for residue CLA h 101 source : AS4 147) chain b residue 190 type sequence F description binding site for residue CLA h 101 source : AS4 148) chain b residue 193 type sequence Y description binding site for residue DGD h 103 source : AS6 149) chain b residue 250 type sequence F description binding site for residue DGD h 103 source : AS6 150) chain b residue 258 type sequence Y description binding site for residue DGD h 103 source : AS6 151) chain b residue 273 type sequence Y description binding site for residue DGD h 103 source : AS6 152) chain b residue 274 type sequence Q description binding site for residue DGD h 103 source : AS6 153) chain b residue 277 type sequence S description binding site for residue DGD h 103 source : AS6 154) chain b residue 463 type sequence F description binding site for residue DGD h 103 source : AS6 155) chain b residue 4 type sequence P description binding site for residue LHG l 101 source : AS7 156) chain b residue 5 type sequence W description binding site for residue LHG l 101 source : AS7 157) chain b residue 6 type sequence Y description binding site for residue LHG l 101 source : AS7 158) chain b residue 40 type sequence Y description binding site for residue LMG m 101 source : AS8 159) chain b residue 327 type sequence T description binding site for residue LMG m 101 source : AS8 160) chain b residue 197-218 type TRANSMEM sequence GVVAHHIAAGIVGIIAGLFHIL description Helical => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ source Swiss-Prot : SWS_FT_FI2 161) chain b residue 234-254 type TRANSMEM sequence IETVLSSSIAAVFFAAFVVAG description Helical => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ source Swiss-Prot : SWS_FT_FI2 162) chain b residue 451-473 type TRANSMEM sequence FTFAHAVFALLFFFGHIWHGART description Helical => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ source Swiss-Prot : SWS_FT_FI2 163) chain b residue 17-37 type TRANSMEM sequence GRLIAAHLMHTALVAGWAGSM description Helical => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ source Swiss-Prot : SWS_FT_FI2 164) chain b residue 95-116 type TRANSMEM sequence GVALAHIVLSGLLFLAACWHWV description Helical => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ source Swiss-Prot : SWS_FT_FI2 165) chain b residue 135-157 type TRANSMEM sequence LPKMFGIHLFLAGLLCFGFGAFH description Helical => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ source Swiss-Prot : SWS_FT_FI2

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