eF-site ID 6dhg-C
PDB Code 6dhg
Chain C

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Title RT XFEL structure of Photosystem II 150 microseconds after the second illumination at 2.5 Angstrom resolution
Classification PHOTOSYNTHESIS
Compound Photosystem II protein D1 1
Source ORGANISM_SCIENTIFIC: Thermosynechococcus elongatus (strain BP-1);
Sequence C:  GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMTLFE
LAHFIPEKPMYEQGLILIPHIATLGWGVGPGGEVVDTFPF
FVVGVVHLISSAVLGFGGVYHAIRGPETLEEYSSFFGYDW
KDKNKMTTILGFHLIVLGIGALLLVAKAMFFGGLYDTWAP
GGGDVRVITNPTLDPRVIFGYLLKSPFGGEGWIVSVNNLE
DVVGGHIWIGLICIAGGIWHILTTPFGWARRAFIWSGEAY
LSYSLGALSMMGFIATCFVWFNNTVYPSEFYGPTGPEASQ
AQAMTFLIRDQKLGANVGSAQGPTGLGKYLMRSPTGEIIF
GGETMRFWDFRGPWLEPLRGPNGLDLNKIKNDIQPWQERR
AAEYMTHAPLGSLNSVGGVATEINSVNFVSPRSWLATSHF
VLAFFFLVGHLWHAGRARAAAAGFEKGIDRESEPVLSMPS
LD
Description


Functional site

1) chain C
residue 354
type
sequence E
description binding site for residue CL A 403
source : AC3

2) chain C
residue 34
type
sequence A
description binding site for residue SQD A 410
source : AD1

3) chain C
residue 36
type
sequence W
description binding site for residue SQD A 410
source : AD1

4) chain C
residue 354
type
sequence E
description binding site for residue OEX A 414
source : AD5

5) chain C
residue 357
type
sequence R
description binding site for residue OEX A 414
source : AD5

6) chain C
residue 214
type
sequence L
description binding site for residue LMG C 501
source : AF9

7) chain C
residue 215
type
sequence K
description binding site for residue LMG C 501
source : AF9

8) chain C
residue 216
type
sequence S
description binding site for residue LMG C 501
source : AF9

9) chain C
residue 221
type
sequence E
description binding site for residue LMG C 501
source : AF9

10) chain C
residue 223
type
sequence W
description binding site for residue LMG C 501
source : AF9

11) chain C
residue 281
type
sequence M
description binding site for residue LMG C 501
source : AF9

12) chain C
residue 94
type
sequence T
description binding site for residue CLA C 502
source : AG1

13) chain C
residue 95
type
sequence L
description binding site for residue CLA C 502
source : AG1

14) chain C
residue 168
type
sequence L
description binding site for residue CLA C 502
source : AG1

15) chain C
residue 171
type
sequence G
description binding site for residue CLA C 502
source : AG1

16) chain C
residue 172
type
sequence A
description binding site for residue CLA C 502
source : AG1

17) chain C
residue 175
type
sequence L
description binding site for residue CLA C 502
source : AG1

18) chain C
residue 237
type
sequence H
description binding site for residue CLA C 502
source : AG1

19) chain C
residue 282
type
sequence M
description binding site for residue CLA C 502
source : AG1

20) chain C
residue 289
type
sequence F
description binding site for residue CLA C 502
source : AG1

21) chain C
residue 297
type
sequence Y
description binding site for residue CLA C 502
source : AG1

22) chain C
residue 63
type
sequence W
description binding site for residue CLA C 503
source : AG2

23) chain C
residue 91
type
sequence H
description binding site for residue CLA C 503
source : AG2

24) chain C
residue 174
type
sequence L
description binding site for residue CLA C 503
source : AG2

25) chain C
residue 279
type
sequence L
description binding site for residue CLA C 503
source : AG2

26) chain C
residue 282
type
sequence M
description binding site for residue CLA C 503
source : AG2

27) chain C
residue 286
type
sequence A
description binding site for residue CLA C 503
source : AG2

28) chain C
residue 297
type
sequence Y
description binding site for residue CLA C 503
source : AG2

29) chain C
residue 426
type
sequence L
description binding site for residue CLA C 503
source : AG2

30) chain C
residue 430
type
sequence H
description binding site for residue CLA C 503
source : AG2

31) chain C
residue 433
type
sequence L
description binding site for residue CLA C 503
source : AG2

32) chain C
residue 437
type
sequence F
description binding site for residue CLA C 503
source : AG2

33) chain C
residue 60
type
sequence I
description binding site for residue CLA C 504
source : AG3

34) chain C
residue 64
type
sequence A
description binding site for residue CLA C 504
source : AG3

35) chain C
residue 68
type
sequence T
description binding site for residue CLA C 504
source : AG3

36) chain C
residue 88
type
sequence L
description binding site for residue CLA C 504
source : AG3

37) chain C
residue 91
type
sequence H
description binding site for residue CLA C 504
source : AG3

38) chain C
residue 114
type
sequence V
description binding site for residue CLA C 504
source : AG3

39) chain C
residue 118
type
sequence H
description binding site for residue CLA C 504
source : AG3

40) chain C
residue 279
type
sequence L
description binding site for residue CLA C 504
source : AG3

41) chain C
residue 63
type
sequence W
description binding site for residue CLA C 505
source : AG4

42) chain C
residue 67
type
sequence M
description binding site for residue CLA C 505
source : AG4

43) chain C
residue 70
type
sequence F
description binding site for residue CLA C 505
source : AG4

44) chain C
residue 84
type
sequence Q
description binding site for residue CLA C 505
source : AG4

45) chain C
residue 85
type
sequence G
description binding site for residue CLA C 505
source : AG4

46) chain C
residue 87
type
sequence I
description binding site for residue CLA C 505
source : AG4

47) chain C
residue 425
type
sequence W
description binding site for residue CLA C 505
source : AG4

48) chain C
residue 429
type
sequence S
description binding site for residue CLA C 505
source : AG4

49) chain C
residue 264
type
sequence F
description binding site for residue CLA C 506
source : AG5

50) chain C
residue 274
type
sequence Y
description binding site for residue CLA C 506
source : AG5

51) chain C
residue 277
type
sequence G
description binding site for residue CLA C 506
source : AG5

52) chain C
residue 278
type
sequence A
description binding site for residue CLA C 506
source : AG5

53) chain C
residue 441
type
sequence H
description binding site for residue CLA C 506
source : AG5

54) chain C
residue 442
type
sequence L
description binding site for residue CLA C 506
source : AG5

55) chain C
residue 445
type
sequence A
description binding site for residue CLA C 506
source : AG5

56) chain C
residue 449
type
sequence R
description binding site for residue CLA C 506
source : AG5

57) chain C
residue 213
type
sequence L
description binding site for residue CLA C 507
source : AG6

58) chain C
residue 243
type
sequence I
description binding site for residue CLA C 507
source : AG6

59) chain C
residue 247
type
sequence G
description binding site for residue CLA C 507
source : AG6

60) chain C
residue 250
type
sequence W
description binding site for residue CLA C 507
source : AG6

61) chain C
residue 251
type
sequence H
description binding site for residue CLA C 507
source : AG6

62) chain C
residue 254
type
sequence T
description binding site for residue CLA C 507
source : AG6

63) chain C
residue 255
type
sequence T
description binding site for residue CLA C 507
source : AG6

64) chain C
residue 256
type
sequence P
description binding site for residue CLA C 507
source : AG6

65) chain C
residue 257
type
sequence F
description binding site for residue CLA C 507
source : AG6

66) chain C
residue 259
type
sequence W
description binding site for residue CLA C 507
source : AG6

67) chain C
residue 264
type
sequence F
description binding site for residue CLA C 507
source : AG6

68) chain C
residue 157
type
sequence M
description binding site for residue CLA C 508
source : AG7

69) chain C
residue 161
type
sequence L
description binding site for residue CLA C 508
source : AG7

70) chain C
residue 164
type
sequence H
description binding site for residue CLA C 508
source : AG7

71) chain C
residue 168
type
sequence L
description binding site for residue CLA C 508
source : AG7

72) chain C
residue 271
type
sequence Y
description binding site for residue CLA C 508
source : AG7

73) chain C
residue 274
type
sequence Y
description binding site for residue CLA C 508
source : AG7

74) chain C
residue 278
type
sequence A
description binding site for residue CLA C 508
source : AG7

75) chain C
residue 36
type
sequence W
description binding site for residue CLA C 509
source : AG8

76) chain C
residue 37
type
sequence A
description binding site for residue CLA C 509
source : AG8

77) chain C
residue 38
type
sequence G
description binding site for residue CLA C 509
source : AG8

78) chain C
residue 39
type
sequence N
description binding site for residue CLA C 509
source : AG8

79) chain C
residue 272
type
sequence L
description binding site for residue CLA C 509
source : AG8

80) chain C
residue 276
type
sequence L
description binding site for residue CLA C 509
source : AG8

81) chain C
residue 436
type
sequence F
description binding site for residue CLA C 509
source : AG8

82) chain C
residue 440
type
sequence G
description binding site for residue CLA C 509
source : AG8

83) chain C
residue 443
type
sequence W
description binding site for residue CLA C 509
source : AG8

84) chain C
residue 444
type
sequence H
description binding site for residue CLA C 509
source : AG8

85) chain C
residue 447
type
sequence R
description binding site for residue CLA C 509
source : AG8

86) chain C
residue 39
type
sequence N
description binding site for residue CLA C 510
source : AG9

87) chain C
residue 49
type
sequence L
description binding site for residue CLA C 510
source : AG9

88) chain C
residue 52
type
sequence A
description binding site for residue CLA C 510
source : AG9

89) chain C
residue 53
type
sequence H
description binding site for residue CLA C 510
source : AG9

90) chain C
residue 56
type
sequence H
description binding site for residue CLA C 510
source : AG9

91) chain C
residue 149
type
sequence Y
description binding site for residue CLA C 510
source : AG9

92) chain C
residue 268
type
sequence G
description binding site for residue CLA C 510
source : AG9

93) chain C
residue 269
type
sequence E
description binding site for residue CLA C 510
source : AG9

94) chain C
residue 271
type
sequence Y
description binding site for residue CLA C 510
source : AG9

95) chain C
residue 272
type
sequence L
description binding site for residue CLA C 510
source : AG9

96) chain C
residue 275
type
sequence S
description binding site for residue CLA C 510
source : AG9

97) chain C
residue 279
type
sequence L
description binding site for residue CLA C 510
source : AG9

98) chain C
residue 39
type
sequence N
description binding site for residue CLA C 511
source : AH1

99) chain C
residue 56
type
sequence H
description binding site for residue CLA C 511
source : AH1

100) chain C
residue 279
type
sequence L
description binding site for residue CLA C 511
source : AH1

101) chain C
residue 436
type
sequence F
description binding site for residue CLA C 511
source : AH1

102) chain C
residue 437
type
sequence F
description binding site for residue CLA C 511
source : AH1

103) chain C
residue 35
type
sequence W
description binding site for residue CLA C 512
source : AH2

104) chain C
residue 38
type
sequence G
description binding site for residue CLA C 512
source : AH2

105) chain C
residue 39
type
sequence N
description binding site for residue CLA C 512
source : AH2

106) chain C
residue 41
type
sequence R
description binding site for residue CLA C 512
source : AH2

107) chain C
residue 42
type
sequence L
description binding site for residue CLA C 512
source : AH2

108) chain C
residue 48
type
sequence K
description binding site for residue CLA C 512
source : AH2

109) chain C
residue 126
type
sequence G
description binding site for residue CLA C 512
source : AH2

110) chain C
residue 127
type
sequence F
description binding site for residue CLA C 512
source : AH2

111) chain C
residue 133
type
sequence A
description binding site for residue CLA C 512
source : AH2

112) chain C
residue 53
type
sequence H
description binding site for residue CLA C 513
source : AH3

113) chain C
residue 146
type
sequence F
description binding site for residue CLA C 513
source : AH3

114) chain C
residue 147
type
sequence F
description binding site for residue CLA C 513
source : AH3

115) chain C
residue 163
type
sequence F
description binding site for residue CLA C 513
source : AH3

116) chain C
residue 164
type
sequence H
description binding site for residue CLA C 513
source : AH3

117) chain C
residue 167
type
sequence V
description binding site for residue CLA C 513
source : AH3

118) chain C
residue 170
type
sequence I
description binding site for residue CLA C 513
source : AH3

119) chain C
residue 171
type
sequence G
description binding site for residue CLA C 513
source : AH3

120) chain C
residue 50
type
sequence L
description binding site for residue CLA C 514
source : AH4

121) chain C
residue 124
type
sequence V
description binding site for residue CLA C 514
source : AH4

122) chain C
residue 128
type
sequence G
description binding site for residue CLA C 514
source : AH4

123) chain C
residue 131
type
sequence Y
description binding site for residue CLA C 514
source : AH4

124) chain C
residue 132
type
sequence H
description binding site for residue CLA C 514
source : AH4

125) chain C
residue 143
type
sequence Y
description binding site for residue CLA C 514
source : AH4

126) chain C
residue 147
type
sequence F
description binding site for residue CLA C 514
source : AH4

127) chain C
residue 209
type
sequence I
description binding site for residue BCR C 515
source : AH5

128) chain C
residue 213
type
sequence L
description binding site for residue BCR C 515
source : AH5

129) chain C
residue 232
type
sequence D
description binding site for residue BCR C 515
source : AH5

130) chain C
residue 236
type
sequence G
description binding site for residue BCR C 515
source : AH5

131) chain C
residue 237
type
sequence H
description binding site for residue BCR C 515
source : AH5

132) chain C
residue 264
type
sequence F
description binding site for residue BCR C 515
source : AH5

133) chain C
residue 217
type
sequence P
description binding site for residue DGD C 516
source : AH6

134) chain C
residue 219
type
sequence G
description binding site for residue DGD C 516
source : AH6

135) chain C
residue 220
type
sequence G
description binding site for residue DGD C 516
source : AH6

136) chain C
residue 222
type
sequence G
description binding site for residue DGD C 516
source : AH6

137) chain C
residue 223
type
sequence W
description binding site for residue DGD C 516
source : AH6

138) chain C
residue 225
type
sequence V
description binding site for residue DGD C 516
source : AH6

139) chain C
residue 227
type
sequence V
description binding site for residue DGD C 516
source : AH6

140) chain C
residue 284
type
sequence F
description binding site for residue DGD C 516
source : AH6

141) chain C
residue 292
type
sequence F
description binding site for residue DGD C 516
source : AH6

142) chain C
residue 294
type
sequence N
description binding site for residue DGD C 516
source : AH6

143) chain C
residue 295
type
sequence T
description binding site for residue DGD C 516
source : AH6

144) chain C
residue 360
type
sequence D
description binding site for residue DGD C 516
source : AH6

145) chain C
residue 361
type
sequence F
description binding site for residue DGD C 516
source : AH6

146) chain C
residue 362
type
sequence R
description binding site for residue DGD C 516
source : AH6

147) chain C
residue 83
type
sequence E
description binding site for residue DGD C 517
source : AH7

148) chain C
residue 84
type
sequence Q
description binding site for residue DGD C 517
source : AH7

149) chain C
residue 85
type
sequence G
description binding site for residue DGD C 517
source : AH7

150) chain C
residue 406
type
sequence S
description binding site for residue DGD C 517
source : AH7

151) chain C
residue 418
type
sequence N
description binding site for residue DGD C 517
source : AH7

152) chain C
residue 419
type
sequence F
description binding site for residue DGD C 517
source : AH7

153) chain C
residue 420
type
sequence V
description binding site for residue DGD C 517
source : AH7

154) chain C
residue 425
type
sequence W
description binding site for residue DGD C 517
source : AH7

155) chain C
residue 405
type
sequence N
description binding site for residue DGD C 518
source : AH8

156) chain C
residue 407
type
sequence V
description binding site for residue DGD C 518
source : AH8

157) chain C
residue 415
type
sequence N
description binding site for residue DGD C 518
source : AH8

158) chain C
residue 416
type
sequence S
description binding site for residue DGD C 518
source : AH8

159) chain C
residue 418
type
sequence N
description binding site for residue DGD C 518
source : AH8

160) chain C
residue 74
type
sequence H
description binding site for residue LMG C 519
source : AH9

161) chain C
residue 55
type
sequence A
description binding site for residue BCR C 520
source : AI1

162) chain C
residue 58
type
sequence G
description binding site for residue BCR C 520
source : AI1

163) chain C
residue 59
type
sequence L
description binding site for residue BCR C 520
source : AI1

164) chain C
residue 122
type
sequence S
description binding site for residue BCR C 520
source : AI1

165) chain C
residue 123
type
sequence A
description binding site for residue BCR C 520
source : AI1

166) chain C
residue 126
type
sequence G
description binding site for residue BCR C 520
source : AI1

167) chain C
residue 33
type
sequence F
description binding site for residue LHG D 409
source : AJ1

168) chain C
residue 36
type
sequence W
description binding site for residue LHG D 409
source : AJ1

169) chain C
residue 443
type
sequence W
description binding site for residue LHG D 409
source : AJ1

170) chain C
residue 447
type
sequence R
description binding site for residue LHG D 409
source : AJ1

171) chain C
residue 62
type
sequence F
description binding site for residue BCR K 101
source : AJ9

172) chain C
residue 120
type
sequence I
description binding site for residue BCR Z 101
source : AK5

173) chain C
residue 121
type
sequence S
description binding site for residue BCR Z 101
source : AK5


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