eF-site ID 6dhf-z
PDB Code 6dhf
Chain z

click to enlarge
Title RT XFEL structure of the one-flash state of Photosystem II (1F, S2-rich) at 2.08 Angstrom resolution
Classification PHOTOSYNTHESIS
Compound Photosystem II protein D1 1
Source ORGANISM_SCIENTIFIC: Thermosynechococcus elongatus (strain BP-1);
Sequence z:  MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSKQLI
FLGSGLWIALVLVVGVLNFFVV
Description


Functional site

1) chain z
residue 20
type
sequence V
description binding site for residue CLA c 511
source : AP5

2) chain z
residue 51
type
sequence V
description binding site for residue BCR c 514
source : AP8

3) chain z
residue 55
type
sequence G
description binding site for residue BCR c 514
source : AP8

4) chain z
residue 16
type
sequence S
description binding site for residue BCR c 521
source : AQ5

5) chain z
residue 16
type
sequence S
description binding site for residue BCR k 101
source : AS8

6) chain z
residue 17
type
sequence F
description binding site for residue BCR k 101
source : AS8

7) chain z
residue 5-25
type TRANSMEM
sequence FQLALAALVILSFVMVIGVPV
description Helical => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ
source Swiss-Prot : SWS_FT_FI2

8) chain z
residue 37-58
type TRANSMEM
sequence KQLIFLGSGLWIALVLVVGVLN
description Helical => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ
source Swiss-Prot : SWS_FT_FI2

9) chain z
residue 26-36
type TOPO_DOM
sequence AYASPQDWDRS
description Cytoplasmic => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ
source Swiss-Prot : SWS_FT_FI3

10) chain z
residue 59-62
type TOPO_DOM
sequence FFVV
description Lumenal => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ
source Swiss-Prot : SWS_FT_FI4

11) chain z
residue 1
type MOD_RES
sequence M
description N-formylmethionine => ECO:0000269|PubMed:19219048, ECO:0000269|PubMed:20558739
source Swiss-Prot : SWS_FT_FI5


Display surface

Download
Links