eF-site ID 6dhf-c PDB Code 6dhf Chain c click to enlarge Title RT XFEL structure of the one-flash state of Photosystem II (1F, S2-rich) at 2.08 Angstrom resolution Classification PHOTOSYNTHESIS Compound Photosystem II protein D1 1 Source ORGANISM_SCIENTIFIC: Thermosynechococcus elongatus (strain BP-1); Sequence c:  ATNRDQESSGFAWWAGNARLINLSGKLLGAHVAHAGLIVF WAGAMTLFELAHFIPEKPMYEQGLILIPHIATLGWGVGPG GEVVDTFPFFVVGVVHLISSAVLGFGGVYHAIRGPETLEE YSSFFGYDWKDKNKMTTILGFHLIVLGIGALLLVAKAMFF GGLYDTWAPGGGDVRVITNPTLDPRVIFGYLLKSPFGGEG WIVSVNNLEDVVGGHIWIGLICIAGGIWHILTTPFGWARR AFIWSGEAYLSYSLGALSMMGFIATCFVWFNNTVYPSEFY GPTGPEASQAQAMTFLIRDQKLGANVGSAQGPTGLGKYLM RSPTGEIIFGGETMRFWDFRGPWLEPLRGPNGLDLNKIKN DIQPWQERRAAEYMTHAPLGSLNSVGGVATEINSVNFVSP RSWLATSHFVLAFFFLVGHLWHAGRARAAAAGFEKGIDRE SEPVLSMPSLD Description Functional site 1) chain c residue 354 type sequence E description binding site for residue CL a 403 source : AK7 2) chain c residue 28 type sequence Q description binding site for residue SQD a 410 source : AL5 3) chain c residue 34 type sequence A description binding site for residue SQD a 410 source : AL5 4) chain c residue 35 type sequence W description binding site for residue SQD a 410 source : AL5 5) chain c residue 36 type sequence W description binding site for residue SQD a 410 source : AL5 6) chain c residue 354 type sequence E description binding site for residue OEX a 414 source : AL8 7) chain c residue 357 type sequence R description binding site for residue OEX a 414 source : AL8 8) chain c residue 239 type sequence W description binding site for residue LMG b 623 source : AO3 9) chain c residue 95 type sequence L description binding site for residue CLA c 501 source : AO4 10) chain c residue 168 type sequence L description binding site for residue CLA c 501 source : AO4 11) chain c residue 171 type sequence G description binding site for residue CLA c 501 source : AO4 12) chain c residue 172 type sequence A description binding site for residue CLA c 501 source : AO4 13) chain c residue 175 type sequence L description binding site for residue CLA c 501 source : AO4 14) chain c residue 237 type sequence H description binding site for residue CLA c 501 source : AO4 15) chain c residue 278 type sequence A description binding site for residue CLA c 501 source : AO4 16) chain c residue 282 type sequence M description binding site for residue CLA c 501 source : AO4 17) chain c residue 289 type sequence F description binding site for residue CLA c 501 source : AO4 18) chain c residue 296 type sequence V description binding site for residue CLA c 501 source : AO4 19) chain c residue 297 type sequence Y description binding site for residue CLA c 501 source : AO4 20) chain c residue 63 type sequence W description binding site for residue CLA c 502 source : AO5 21) chain c residue 87 type sequence I description binding site for residue CLA c 502 source : AO5 22) chain c residue 88 type sequence L description binding site for residue CLA c 502 source : AO5 23) chain c residue 91 type sequence H description binding site for residue CLA c 502 source : AO5 24) chain c residue 174 type sequence L description binding site for residue CLA c 502 source : AO5 25) chain c residue 279 type sequence L description binding site for residue CLA c 502 source : AO5 26) chain c residue 282 type sequence M description binding site for residue CLA c 502 source : AO5 27) chain c residue 286 type sequence A description binding site for residue CLA c 502 source : AO5 28) chain c residue 290 type sequence V description binding site for residue CLA c 502 source : AO5 29) chain c residue 297 type sequence Y description binding site for residue CLA c 502 source : AO5 30) chain c residue 430 type sequence H description binding site for residue CLA c 502 source : AO5 31) chain c residue 437 type sequence F description binding site for residue CLA c 502 source : AO5 32) chain c residue 60 type sequence I description binding site for residue CLA c 503 source : AO6 33) chain c residue 61 type sequence V description binding site for residue CLA c 503 source : AO6 34) chain c residue 64 type sequence A description binding site for residue CLA c 503 source : AO6 35) chain c residue 68 type sequence T description binding site for residue CLA c 503 source : AO6 36) chain c residue 88 type sequence L description binding site for residue CLA c 503 source : AO6 37) chain c residue 91 type sequence H description binding site for residue CLA c 503 source : AO6 38) chain c residue 118 type sequence H description binding site for residue CLA c 503 source : AO6 39) chain c residue 63 type sequence W description binding site for residue CLA c 504 source : AO7 40) chain c residue 67 type sequence M description binding site for residue CLA c 504 source : AO7 41) chain c residue 70 type sequence F description binding site for residue CLA c 504 source : AO7 42) chain c residue 84 type sequence Q description binding site for residue CLA c 504 source : AO7 43) chain c residue 85 type sequence G description binding site for residue CLA c 504 source : AO7 44) chain c residue 87 type sequence I description binding site for residue CLA c 504 source : AO7 45) chain c residue 425 type sequence W description binding site for residue CLA c 504 source : AO7 46) chain c residue 429 type sequence S description binding site for residue CLA c 504 source : AO7 47) chain c residue 430 type sequence H description binding site for residue CLA c 504 source : AO7 48) chain c residue 264 type sequence F description binding site for residue CLA c 505 source : AO8 49) chain c residue 274 type sequence Y description binding site for residue CLA c 505 source : AO8 50) chain c residue 277 type sequence G description binding site for residue CLA c 505 source : AO8 51) chain c residue 441 type sequence H description binding site for residue CLA c 505 source : AO8 52) chain c residue 442 type sequence L description binding site for residue CLA c 505 source : AO8 53) chain c residue 445 type sequence A description binding site for residue CLA c 505 source : AO8 54) chain c residue 449 type sequence R description binding site for residue CLA c 505 source : AO8 55) chain c residue 161 type sequence L description binding site for residue CLA c 506 source : AO9 56) chain c residue 165 type sequence L description binding site for residue CLA c 506 source : AO9 57) chain c residue 213 type sequence L description binding site for residue CLA c 506 source : AO9 58) chain c residue 243 type sequence I description binding site for residue CLA c 506 source : AO9 59) chain c residue 247 type sequence G description binding site for residue CLA c 506 source : AO9 60) chain c residue 250 type sequence W description binding site for residue CLA c 506 source : AO9 61) chain c residue 251 type sequence H description binding site for residue CLA c 506 source : AO9 62) chain c residue 254 type sequence T description binding site for residue CLA c 506 source : AO9 63) chain c residue 255 type sequence T description binding site for residue CLA c 506 source : AO9 64) chain c residue 256 type sequence P description binding site for residue CLA c 506 source : AO9 65) chain c residue 257 type sequence F description binding site for residue CLA c 506 source : AO9 66) chain c residue 259 type sequence W description binding site for residue CLA c 506 source : AO9 67) chain c residue 264 type sequence F description binding site for residue CLA c 506 source : AO9 68) chain c residue 157 type sequence M description binding site for residue CLA c 507 source : AP1 69) chain c residue 158 type sequence T description binding site for residue CLA c 507 source : AP1 70) chain c residue 161 type sequence L description binding site for residue CLA c 507 source : AP1 71) chain c residue 164 type sequence H description binding site for residue CLA c 507 source : AP1 72) chain c residue 168 type sequence L description binding site for residue CLA c 507 source : AP1 73) chain c residue 264 type sequence F description binding site for residue CLA c 507 source : AP1 74) chain c residue 266 type sequence W description binding site for residue CLA c 507 source : AP1 75) chain c residue 271 type sequence Y description binding site for residue CLA c 507 source : AP1 76) chain c residue 274 type sequence Y description binding site for residue CLA c 507 source : AP1 77) chain c residue 275 type sequence S description binding site for residue CLA c 507 source : AP1 78) chain c residue 282 type sequence M description binding site for residue CLA c 507 source : AP1 79) chain c residue 33 type sequence F description binding site for residue CLA c 508 source : AP2 80) chain c residue 36 type sequence W description binding site for residue CLA c 508 source : AP2 81) chain c residue 37 type sequence A description binding site for residue CLA c 508 source : AP2 82) chain c residue 38 type sequence G description binding site for residue CLA c 508 source : AP2 83) chain c residue 39 type sequence N description binding site for residue CLA c 508 source : AP2 84) chain c residue 272 type sequence L description binding site for residue CLA c 508 source : AP2 85) chain c residue 276 type sequence L description binding site for residue CLA c 508 source : AP2 86) chain c residue 436 type sequence F description binding site for residue CLA c 508 source : AP2 87) chain c residue 440 type sequence G description binding site for residue CLA c 508 source : AP2 88) chain c residue 443 type sequence W description binding site for residue CLA c 508 source : AP2 89) chain c residue 444 type sequence H description binding site for residue CLA c 508 source : AP2 90) chain c residue 447 type sequence R description binding site for residue CLA c 508 source : AP2 91) chain c residue 39 type sequence N description binding site for residue CLA c 509 source : AP3 92) chain c residue 49 type sequence L description binding site for residue CLA c 509 source : AP3 93) chain c residue 52 type sequence A description binding site for residue CLA c 509 source : AP3 94) chain c residue 53 type sequence H description binding site for residue CLA c 509 source : AP3 95) chain c residue 56 type sequence H description binding site for residue CLA c 509 source : AP3 96) chain c residue 151 type sequence W description binding site for residue CLA c 509 source : AP3 97) chain c residue 164 type sequence H description binding site for residue CLA c 509 source : AP3 98) chain c residue 268 type sequence G description binding site for residue CLA c 509 source : AP3 99) chain c residue 271 type sequence Y description binding site for residue CLA c 509 source : AP3 100) chain c residue 272 type sequence L description binding site for residue CLA c 509 source : AP3 101) chain c residue 275 type sequence S description binding site for residue CLA c 509 source : AP3 102) chain c residue 39 type sequence N description binding site for residue CLA c 510 source : AP4 103) chain c residue 56 type sequence H description binding site for residue CLA c 510 source : AP4 104) chain c residue 59 type sequence L description binding site for residue CLA c 510 source : AP4 105) chain c residue 279 type sequence L description binding site for residue CLA c 510 source : AP4 106) chain c residue 437 type sequence F description binding site for residue CLA c 510 source : AP4 107) chain c residue 24 type sequence T description binding site for residue CLA c 511 source : AP5 108) chain c residue 25 type sequence N description binding site for residue CLA c 511 source : AP5 109) chain c residue 26 type sequence R description binding site for residue CLA c 511 source : AP5 110) chain c residue 35 type sequence W description binding site for residue CLA c 511 source : AP5 111) chain c residue 38 type sequence G description binding site for residue CLA c 511 source : AP5 112) chain c residue 39 type sequence N description binding site for residue CLA c 511 source : AP5 113) chain c residue 41 type sequence R description binding site for residue CLA c 511 source : AP5 114) chain c residue 42 type sequence L description binding site for residue CLA c 511 source : AP5 115) chain c residue 48 type sequence K description binding site for residue CLA c 511 source : AP5 116) chain c residue 52 type sequence A description binding site for residue CLA c 511 source : AP5 117) chain c residue 123 type sequence A description binding site for residue CLA c 511 source : AP5 118) chain c residue 126 type sequence G description binding site for residue CLA c 511 source : AP5 119) chain c residue 127 type sequence F description binding site for residue CLA c 511 source : AP5 120) chain c residue 53 type sequence H description binding site for residue CLA c 512 source : AP6 121) chain c residue 147 type sequence F description binding site for residue CLA c 512 source : AP6 122) chain c residue 160 type sequence I description binding site for residue CLA c 512 source : AP6 123) chain c residue 163 type sequence F description binding site for residue CLA c 512 source : AP6 124) chain c residue 164 type sequence H description binding site for residue CLA c 512 source : AP6 125) chain c residue 166 type sequence I description binding site for residue CLA c 512 source : AP6 126) chain c residue 167 type sequence V description binding site for residue CLA c 512 source : AP6 127) chain c residue 171 type sequence G description binding site for residue CLA c 512 source : AP6 128) chain c residue 174 type sequence L description binding site for residue CLA c 512 source : AP6 129) chain c residue 124 type sequence V description binding site for residue CLA c 513 source : AP7 130) chain c residue 128 type sequence G description binding site for residue CLA c 513 source : AP7 131) chain c residue 131 type sequence Y description binding site for residue CLA c 513 source : AP7 132) chain c residue 132 type sequence H description binding site for residue CLA c 513 source : AP7 133) chain c residue 137 type sequence P description binding site for residue CLA c 513 source : AP7 134) chain c residue 140 type sequence L description binding site for residue CLA c 513 source : AP7 135) chain c residue 143 type sequence Y description binding site for residue CLA c 513 source : AP7 136) chain c residue 147 type sequence F description binding site for residue CLA c 513 source : AP7 137) chain c residue 121 type sequence S description binding site for residue BCR c 514 source : AP8 138) chain c residue 124 type sequence V description binding site for residue BCR c 514 source : AP8 139) chain c residue 209 type sequence I description binding site for residue BCR c 515 source : AP9 140) chain c residue 212 type sequence Y description binding site for residue BCR c 515 source : AP9 141) chain c residue 213 type sequence L description binding site for residue BCR c 515 source : AP9 142) chain c residue 224 type sequence I description binding site for residue BCR c 515 source : AP9 143) chain c residue 237 type sequence H description binding site for residue BCR c 515 source : AP9 144) chain c residue 264 type sequence F description binding site for residue BCR c 515 source : AP9 145) chain c residue 217 type sequence P description binding site for residue DGD c 516 source : AQ1 146) chain c residue 219 type sequence G description binding site for residue DGD c 516 source : AQ1 147) chain c residue 220 type sequence G description binding site for residue DGD c 516 source : AQ1 148) chain c residue 221 type sequence E description binding site for residue DGD c 516 source : AQ1 149) chain c residue 222 type sequence G description binding site for residue DGD c 516 source : AQ1 150) chain c residue 223 type sequence W description binding site for residue DGD c 516 source : AQ1 151) chain c residue 228 type sequence N description binding site for residue DGD c 516 source : AQ1 152) chain c residue 292 type sequence F description binding site for residue DGD c 516 source : AQ1 153) chain c residue 293 type sequence N description binding site for residue DGD c 516 source : AQ1 154) chain c residue 294 type sequence N description binding site for residue DGD c 516 source : AQ1 155) chain c residue 295 type sequence T description binding site for residue DGD c 516 source : AQ1 156) chain c residue 360 type sequence D description binding site for residue DGD c 516 source : AQ1 157) chain c residue 361 type sequence F description binding site for residue DGD c 516 source : AQ1 158) chain c residue 362 type sequence R description binding site for residue DGD c 516 source : AQ1 159) chain c residue 438 type sequence L description binding site for residue DGD c 516 source : AQ1 160) chain c residue 83 type sequence E description binding site for residue DGD c 517 source : AQ2 161) chain c residue 84 type sequence Q description binding site for residue DGD c 517 source : AQ2 162) chain c residue 85 type sequence G description binding site for residue DGD c 517 source : AQ2 163) chain c residue 406 type sequence S description binding site for residue DGD c 517 source : AQ2 164) chain c residue 418 type sequence N description binding site for residue DGD c 517 source : AQ2 165) chain c residue 419 type sequence F description binding site for residue DGD c 517 source : AQ2 166) chain c residue 420 type sequence V description binding site for residue DGD c 517 source : AQ2 167) chain c residue 425 type sequence W description binding site for residue DGD c 517 source : AQ2 168) chain c residue 405 type sequence N description binding site for residue DGD c 518 source : AQ3 169) chain c residue 407 type sequence V description binding site for residue DGD c 518 source : AQ3 170) chain c residue 415 type sequence N description binding site for residue DGD c 518 source : AQ3 171) chain c residue 416 type sequence S description binding site for residue DGD c 518 source : AQ3 172) chain c residue 418 type sequence N description binding site for residue DGD c 518 source : AQ3 173) chain c residue 74 type sequence H description binding site for residue LMG c 519 source : AQ4 174) chain c residue 433 type sequence L description binding site for residue LMG c 519 source : AQ4 175) chain c residue 55 type sequence A description binding site for residue BCR c 521 source : AQ5 176) chain c residue 58 type sequence G description binding site for residue BCR c 521 source : AQ5 177) chain c residue 59 type sequence L description binding site for residue BCR c 521 source : AQ5 178) chain c residue 122 type sequence S description binding site for residue BCR c 521 source : AQ5 179) chain c residue 123 type sequence A description binding site for residue BCR c 521 source : AQ5 180) chain c residue 126 type sequence G description binding site for residue BCR c 521 source : AQ5 181) chain c residue 202 type sequence P description binding site for residue LMG c 522 source : AQ6 182) chain c residue 204 type sequence L description binding site for residue LMG c 522 source : AQ6 183) chain c residue 242 type sequence L description binding site for residue LMG c 522 source : AQ6 184) chain c residue 245 type sequence I description binding site for residue LMG c 522 source : AQ6 185) chain c residue 214 type sequence L description binding site for residue LMG c 524 source : AQ7 186) chain c residue 215 type sequence K description binding site for residue LMG c 524 source : AQ7 187) chain c residue 216 type sequence S description binding site for residue LMG c 524 source : AQ7 188) chain c residue 218 type sequence F description binding site for residue LMG c 524 source : AQ7 189) chain c residue 221 type sequence E description binding site for residue LMG c 524 source : AQ7 190) chain c residue 223 type sequence W description binding site for residue LMG c 524 source : AQ7 191) chain c residue 284 type sequence F description binding site for residue LMG c 524 source : AQ7 192) chain c residue 443 type sequence W description binding site for residue LHG d 410 source : AR8 193) chain c residue 447 type sequence R description binding site for residue LHG d 410 source : AR8 194) chain c residue 181 type sequence F description binding site for residue CLA h 101 source : AS4 195) chain c residue 62 type sequence F description binding site for residue BCR k 101 source : AS8 196) chain c residue 281-301 type TRANSMEM sequence MMGFIATCFVWFNNTVYPSEF description Helical => ECO:0000255|HAMAP-Rule:MF_00717 source Swiss-Prot : SWS_FT_FI1 197) chain c residue 437-461 type TRANSMEM sequence FLVGHLWHAGRARAAAAGFEKGIDR description Helical => ECO:0000255|HAMAP-Rule:MF_00717 source Swiss-Prot : SWS_FT_FI1 198) chain c residue 266-280 type TOPO_DOM sequence WSGEAYLSYSLGALS description Cytoplasmic => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ source Swiss-Prot : SWS_FT_FI3 199) chain c residue 462-473 type TOPO_DOM sequence ESEPVLSMPSLD description Cytoplasmic => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ source Swiss-Prot : SWS_FT_FI3

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