eF-site ID 6dhf-B
PDB Code 6dhf
Chain B

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Title RT XFEL structure of the one-flash state of Photosystem II (1F, S2-rich) at 2.08 Angstrom resolution
Classification PHOTOSYNTHESIS
Compound Photosystem II protein D1 1
Source ORGANISM_SCIENTIFIC: Thermosynechococcus elongatus (strain BP-1);
Sequence B:  GLPWYRVHTVLINDPGRLIAAHLMHTALVAGWAGSMALYE
LATFDPSDPVLNPMWRQGMFVLPFMARLGVTGSWSGWSIT
GETGIDPGFWSFEGVALAHIVLSGLLFLAACWHWVYWDLE
LFRDPRTGEPALDLPKMFGIHLFLAGLLCFGFGAFHLTGL
FGPGMWVSDPYGLTGSVQPVAPEWGPDGFNPYNPGGVVAH
HIAAGIVGIIAGLFHILVRPPQRLYKALRMGNIETVLSSS
IAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDSSYFQ
QEINRRVQASLASGATLEEAWSAIPEKLAFYDYIGNNPAK
GGLFRTGPMNKGDGIAQAWKGHAVFRNKEGEELFVRRMPA
FFESFPVILTDKNGVVKADIPFRRAESKYSFEQQGVTVSF
YGGELNGQTFTDPPTVKSYARKAIFGEIFEFDTETLNSDG
IFRTSPRGWFTFAHAVFALLFFFGHIWHGARTLFRDVFSG
IDPELSPEQVEWGFYQKVGDVTTRR
Description


Functional site

1) chain B
residue 185
type
sequence W
description binding site for residue CLA B 601
source : AD6

2) chain B
residue 186
type
sequence G
description binding site for residue CLA B 601
source : AD6

3) chain B
residue 190
type
sequence F
description binding site for residue CLA B 601
source : AD6

4) chain B
residue 189
type
sequence G
description binding site for residue CLA B 602
source : AD7

5) chain B
residue 190
type
sequence F
description binding site for residue CLA B 602
source : AD7

6) chain B
residue 192
type
sequence P
description binding site for residue CLA B 602
source : AD7

7) chain B
residue 197
type
sequence G
description binding site for residue CLA B 602
source : AD7

8) chain B
residue 201
type
sequence H
description binding site for residue CLA B 602
source : AD7

9) chain B
residue 208
type
sequence V
description binding site for residue CLA B 602
source : AD7

10) chain B
residue 247
type
sequence F
description binding site for residue CLA B 602
source : AD7

11) chain B
residue 250
type
sequence F
description binding site for residue CLA B 602
source : AD7

12) chain B
residue 68
type
sequence R
description binding site for residue CLA B 603
source : AD8

13) chain B
residue 69
type
sequence L
description binding site for residue CLA B 603
source : AD8

14) chain B
residue 146
type
sequence A
description binding site for residue CLA B 603
source : AD8

15) chain B
residue 150
type
sequence C
description binding site for residue CLA B 603
source : AD8

16) chain B
residue 153
type
sequence F
description binding site for residue CLA B 603
source : AD8

17) chain B
residue 201
type
sequence H
description binding site for residue CLA B 603
source : AD8

18) chain B
residue 202
type
sequence H
description binding site for residue CLA B 603
source : AD8

19) chain B
residue 247
type
sequence F
description binding site for residue CLA B 603
source : AD8

20) chain B
residue 252
type
sequence V
description binding site for residue CLA B 603
source : AD8

21) chain B
residue 262
type
sequence T
description binding site for residue CLA B 603
source : AD8

22) chain B
residue 33
type
sequence W
description binding site for residue CLA B 604
source : AD9

23) chain B
residue 61
type
sequence F
description binding site for residue CLA B 604
source : AD9

24) chain B
residue 65
type
sequence F
description binding site for residue CLA B 604
source : AD9

25) chain B
residue 68
type
sequence R
description binding site for residue CLA B 604
source : AD9

26) chain B
residue 149
type
sequence L
description binding site for residue CLA B 604
source : AD9

27) chain B
residue 245
type
sequence V
description binding site for residue CLA B 604
source : AD9

28) chain B
residue 248
type
sequence A
description binding site for residue CLA B 604
source : AD9

29) chain B
residue 252
type
sequence V
description binding site for residue CLA B 604
source : AD9

30) chain B
residue 451
type
sequence F
description binding site for residue CLA B 604
source : AD9

31) chain B
residue 455
type
sequence H
description binding site for residue CLA B 604
source : AD9

32) chain B
residue 458
type
sequence F
description binding site for residue CLA B 604
source : AD9

33) chain B
residue 27
type
sequence T
description binding site for residue CLA B 605
source : AE1

34) chain B
residue 30
type
sequence V
description binding site for residue CLA B 605
source : AE1

35) chain B
residue 34
type
sequence A
description binding site for residue CLA B 605
source : AE1

36) chain B
residue 62
type
sequence V
description binding site for residue CLA B 605
source : AE1

37) chain B
residue 66
type
sequence M
description binding site for residue CLA B 605
source : AE1

38) chain B
residue 68
type
sequence R
description binding site for residue CLA B 605
source : AE1

39) chain B
residue 69
type
sequence L
description binding site for residue CLA B 605
source : AE1

40) chain B
residue 96
type
sequence V
description binding site for residue CLA B 605
source : AE1

41) chain B
residue 100
type
sequence H
description binding site for residue CLA B 605
source : AE1

42) chain B
residue 103
type
sequence L
description binding site for residue CLA B 605
source : AE1

43) chain B
residue 205
type
sequence A
description binding site for residue CLA B 605
source : AE1

44) chain B
residue 69
type
sequence L
description binding site for residue CLA B 606
source : AE2

45) chain B
residue 70
type
sequence G
description binding site for residue CLA B 606
source : AE2

46) chain B
residue 91
type
sequence W
description binding site for residue CLA B 606
source : AE2

47) chain B
residue 96
type
sequence V
description binding site for residue CLA B 606
source : AE2

48) chain B
residue 99
type
sequence A
description binding site for residue CLA B 606
source : AE2

49) chain B
residue 100
type
sequence H
description binding site for residue CLA B 606
source : AE2

50) chain B
residue 102
type
sequence V
description binding site for residue CLA B 606
source : AE2

51) chain B
residue 149
type
sequence L
description binding site for residue CLA B 606
source : AE2

52) chain B
residue 152
type
sequence G
description binding site for residue CLA B 606
source : AE2

53) chain B
residue 153
type
sequence F
description binding site for residue CLA B 606
source : AE2

54) chain B
residue 156
type
sequence F
description binding site for residue CLA B 606
source : AE2

55) chain B
residue 157
type
sequence H
description binding site for residue CLA B 606
source : AE2

56) chain B
residue 162
type
sequence F
description binding site for residue CLA B 606
source : AE2

57) chain B
residue 164
type
sequence P
description binding site for residue CLA B 606
source : AE2

58) chain B
residue 33
type
sequence W
description binding site for residue CLA B 607
source : AE3

59) chain B
residue 40
type
sequence Y
description binding site for residue CLA B 607
source : AE3

60) chain B
residue 58
type
sequence Q
description binding site for residue CLA B 607
source : AE3

61) chain B
residue 59
type
sequence G
description binding site for residue CLA B 607
source : AE3

62) chain B
residue 61
type
sequence F
description binding site for residue CLA B 607
source : AE3

63) chain B
residue 324
type
sequence L
description binding site for residue CLA B 607
source : AE3

64) chain B
residue 327
type
sequence T
description binding site for residue CLA B 607
source : AE3

65) chain B
residue 328
type
sequence G
description binding site for residue CLA B 607
source : AE3

66) chain B
residue 329
type
sequence P
description binding site for residue CLA B 607
source : AE3

67) chain B
residue 450
type
sequence W
description binding site for residue CLA B 607
source : AE3

68) chain B
residue 454
type
sequence A
description binding site for residue CLA B 607
source : AE3

69) chain B
residue 236
type
sequence T
description binding site for residue CLA B 608
source : AE4

70) chain B
residue 239
type
sequence S
description binding site for residue CLA B 608
source : AE4

71) chain B
residue 240
type
sequence S
description binding site for residue CLA B 608
source : AE4

72) chain B
residue 243
type
sequence A
description binding site for residue CLA B 608
source : AE4

73) chain B
residue 463
type
sequence F
description binding site for residue CLA B 608
source : AE4

74) chain B
residue 466
type
sequence H
description binding site for residue CLA B 608
source : AE4

75) chain B
residue 467
type
sequence I
description binding site for residue CLA B 608
source : AE4

76) chain B
residue 473
type
sequence T
description binding site for residue CLA B 608
source : AE4

77) chain B
residue 139
type
sequence F
description binding site for residue CLA B 609
source : AE5

78) chain B
residue 208
type
sequence V
description binding site for residue CLA B 609
source : AE5

79) chain B
residue 212
type
sequence A
description binding site for residue CLA B 609
source : AE5

80) chain B
residue 215
type
sequence F
description binding site for residue CLA B 609
source : AE5

81) chain B
residue 216
type
sequence H
description binding site for residue CLA B 609
source : AE5

82) chain B
residue 219
type
sequence V
description binding site for residue CLA B 609
source : AE5

83) chain B
residue 221
type
sequence P
description binding site for residue CLA B 609
source : AE5

84) chain B
residue 222
type
sequence P
description binding site for residue CLA B 609
source : AE5

85) chain B
residue 229
type
sequence L
description binding site for residue CLA B 609
source : AE5

86) chain B
residue 135
type
sequence L
description binding site for residue CLA B 610
source : AE6

87) chain B
residue 139
type
sequence F
description binding site for residue CLA B 610
source : AE6

88) chain B
residue 142
type
sequence H
description binding site for residue CLA B 610
source : AE6

89) chain B
residue 143
type
sequence L
description binding site for residue CLA B 610
source : AE6

90) chain B
residue 146
type
sequence A
description binding site for residue CLA B 610
source : AE6

91) chain B
residue 231
type
sequence M
description binding site for residue CLA B 610
source : AE6

92) chain B
residue 237
type
sequence V
description binding site for residue CLA B 610
source : AE6

93) chain B
residue 240
type
sequence S
description binding site for residue CLA B 610
source : AE6

94) chain B
residue 241
type
sequence S
description binding site for residue CLA B 610
source : AE6

95) chain B
residue 5
type
sequence W
description binding site for residue CLA B 611
source : AE7

96) chain B
residue 6
type
sequence Y
description binding site for residue CLA B 611
source : AE7

97) chain B
residue 7
type
sequence R
description binding site for residue CLA B 611
source : AE7

98) chain B
residue 8
type
sequence V
description binding site for residue CLA B 611
source : AE7

99) chain B
residue 9
type
sequence H
description binding site for residue CLA B 611
source : AE7

100) chain B
residue 10
type
sequence T
description binding site for residue CLA B 611
source : AE7

101) chain B
residue 238
type
sequence L
description binding site for residue CLA B 611
source : AE7

102) chain B
residue 462
type
sequence F
description binding site for residue CLA B 611
source : AE7

103) chain B
residue 465
type
sequence G
description binding site for residue CLA B 611
source : AE7

104) chain B
residue 468
type
sequence W
description binding site for residue CLA B 611
source : AE7

105) chain B
residue 469
type
sequence H
description binding site for residue CLA B 611
source : AE7

106) chain B
residue 472
type
sequence R
description binding site for residue CLA B 611
source : AE7

107) chain B
residue 9
type
sequence H
description binding site for residue CLA B 612
source : AE8

108) chain B
residue 19
type
sequence L
description binding site for residue CLA B 612
source : AE8

109) chain B
residue 23
type
sequence H
description binding site for residue CLA B 612
source : AE8

110) chain B
residue 26
type
sequence H
description binding site for residue CLA B 612
source : AE8

111) chain B
residue 27
type
sequence T
description binding site for residue CLA B 612
source : AE8

112) chain B
residue 237
type
sequence V
description binding site for residue CLA B 612
source : AE8

113) chain B
residue 238
type
sequence L
description binding site for residue CLA B 612
source : AE8

114) chain B
residue 241
type
sequence S
description binding site for residue CLA B 612
source : AE8

115) chain B
residue 245
type
sequence V
description binding site for residue CLA B 612
source : AE8

116) chain B
residue 9
type
sequence H
description binding site for residue CLA B 613
source : AE9

117) chain B
residue 26
type
sequence H
description binding site for residue CLA B 613
source : AE9

118) chain B
residue 33
type
sequence W
description binding site for residue CLA B 613
source : AE9

119) chain B
residue 462
type
sequence F
description binding site for residue CLA B 613
source : AE9

120) chain B
residue 8
type
sequence V
description binding site for residue CLA B 614
source : AF1

121) chain B
residue 9
type
sequence H
description binding site for residue CLA B 614
source : AF1

122) chain B
residue 115
type
sequence W
description binding site for residue CLA B 614
source : AF1

123) chain B
residue 20
type
sequence I
description binding site for residue CLA B 615
source : AF2

124) chain B
residue 23
type
sequence H
description binding site for residue CLA B 615
source : AF2

125) chain B
residue 133
type
sequence L
description binding site for residue CLA B 615
source : AF2

126) chain B
residue 138
type
sequence M
description binding site for residue CLA B 615
source : AF2

127) chain B
residue 142
type
sequence H
description binding site for residue CLA B 615
source : AF2

128) chain B
residue 145
type
sequence L
description binding site for residue CLA B 615
source : AF2

129) chain B
residue 24
type
sequence L
description binding site for residue CLA B 616
source : AF3

130) chain B
residue 113
type
sequence W
description binding site for residue CLA B 616
source : AF3

131) chain B
residue 114
type
sequence H
description binding site for residue CLA B 616
source : AF3

132) chain B
residue 120
type
sequence L
description binding site for residue CLA B 616
source : AF3

133) chain B
residue 25
type
sequence M
description binding site for residue BCR B 617
source : AF4

134) chain B
residue 115
type
sequence W
description binding site for residue BCR B 617
source : AF4

135) chain B
residue 29
type
sequence L
description binding site for residue BCR B 618
source : AF5

136) chain B
residue 32
type
sequence G
description binding site for residue BCR B 618
source : AF5

137) chain B
residue 33
type
sequence W
description binding site for residue BCR B 618
source : AF5

138) chain B
residue 36
type
sequence S
description binding site for residue BCR B 618
source : AF5

139) chain B
residue 101
type
sequence I
description binding site for residue BCR B 618
source : AF5

140) chain B
residue 102
type
sequence V
description binding site for residue BCR B 618
source : AF5

141) chain B
residue 104
type
sequence S
description binding site for residue BCR B 618
source : AF5

142) chain B
residue 105
type
sequence G
description binding site for residue BCR B 618
source : AF5

143) chain B
residue 107
type
sequence L
description binding site for residue BCR B 619
source : AF6

144) chain B
residue 109
type
sequence L
description binding site for residue BCR B 619
source : AF6

145) chain B
residue 228
type
sequence A
description binding site for residue LMG B 621
source : AF7

146) chain B
residue 18
type
sequence R
description binding site for residue SQD B 622
source : AF8

147) chain B
residue 104
type
sequence S
description binding site for residue SQD B 622
source : AF8

148) chain B
residue 115
type
sequence W
description binding site for residue SQD B 622
source : AF8

149) chain B
residue 224
type
sequence R
description binding site for residue LMG D 410
source : AJ1

150) chain B
residue 6
type
sequence Y
description binding site for residue LHG D 411
source : AJ2

151) chain B
residue 7
type
sequence R
description binding site for residue LHG D 411
source : AJ2

152) chain B
residue 468
type
sequence W
description binding site for residue LHG D 411
source : AJ2

153) chain B
residue 479
type
sequence F
description binding site for residue LHG D 411
source : AJ2

154) chain B
residue 193
type
sequence Y
description binding site for residue DGD H 102
source : AJ7

155) chain B
residue 250
type
sequence F
description binding site for residue DGD H 102
source : AJ7

156) chain B
residue 254
type
sequence G
description binding site for residue DGD H 102
source : AJ7

157) chain B
residue 258
type
sequence Y
description binding site for residue DGD H 102
source : AJ7

158) chain B
residue 274
type
sequence Q
description binding site for residue DGD H 102
source : AJ7

159) chain B
residue 277
type
sequence S
description binding site for residue DGD H 102
source : AJ7

160) chain B
residue 4
type
sequence P
description binding site for residue LHG L 101
source : AK1

161) chain B
residue 5
type
sequence W
description binding site for residue LHG L 101
source : AK1

162) chain B
residue 6
type
sequence Y
description binding site for residue LHG L 101
source : AK1

163) chain B
residue 327
type
sequence T
description binding site for residue LMG M 101
source : AK2

164) chain B
residue 328
type
sequence G
description binding site for residue LMG M 101
source : AK2

165) chain B
residue 329
type
sequence P
description binding site for residue LMG M 101
source : AK2

166) chain B
residue 332
type
sequence K
description binding site for residue LMG M 101
source : AK2

167) chain B
residue 109
type
sequence L
description binding site for residue SQD a 411
source : AL6

168) chain B
residue 75
type
sequence W
description binding site for residue DGD a 412
source : AL7

169) chain B
residue 33
type
sequence W
description binding site for residue BCR t 101
source : AT1

170) chain B
residue 36
type
sequence S
description binding site for residue BCR t 101
source : AT1

171) chain B
residue 37
type
sequence M
description binding site for residue BCR t 101
source : AT1


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