eF-site ID 6dha-B
PDB Code 6dha
Chain B

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Title Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with Hydroxy Pioglitazone (M-IV)
Classification transcription/transcription inhibitor
Compound Peroxisome proliferator-activated receptor gamma
Source (PPARG_HUMAN)
Sequence B:  ESADLRALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSP
FVIYDMNSLMMGEDKIKFKHITEVAIRIFQGCQFRSVEAV
QEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASL
MNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVK
FNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNL
LQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLL
QVIKKTETDMSLHPLLQEIYKDL
Description


Functional site

1) chain B
residue 249
type
sequence I
description binding site for residue GFV B 501
source : AC4

2) chain B
residue 255
type
sequence L
description binding site for residue GFV B 501
source : AC4

3) chain B
residue 259
type
sequence E
description binding site for residue GFV B 501
source : AC4

4) chain B
residue 264
type
sequence F
description binding site for residue GFV B 501
source : AC4

5) chain B
residue 266
type
sequence H
description binding site for residue GFV B 501
source : AC4

6) chain B
residue 267
type
sequence I
description binding site for residue GFV B 501
source : AC4

7) chain B
residue 280
type
sequence R
description binding site for residue GFV B 501
source : AC4

8) chain B
residue 281
type
sequence I
description binding site for residue GFV B 501
source : AC4

9) chain B
residue 285
type
sequence C
description binding site for residue GFV B 501
source : AC4

10) chain B
residue 288
type
sequence R
description binding site for residue GFV B 501
source : AC4

11) chain B
residue 292
type
sequence A
description binding site for residue GFV B 501
source : AC4

12) chain B
residue 326
type
sequence I
description binding site for residue GFV B 501
source : AC4

13) chain B
residue 330
type
sequence L
description binding site for residue GFV B 501
source : AC4

14) chain B
residue 341
type
sequence I
description binding site for residue GFV B 501
source : AC4

15) chain B
residue 348
type
sequence M
description binding site for residue GFV B 501
source : AC4

16) chain B
residue 449
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

17) chain B
residue 473
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

18) chain B
residue 286
type BINDING
sequence Q
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

19) chain B
residue 323
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

20) chain B
residue 224
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:36737649
source Swiss-Prot : SWS_FT_FI2


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