eF-site ID 6ddi-ABC
PDB Code 6ddi
Chain A, B, C

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Title Crystal Structure of the human BRD2 BD1 bromodomain in complex with a Tetrahydroquinoline analogue
Classification Transcription/Inhibitor
Compound Bromodomain-containing protein 2
Source (BRD2_HUMAN)
Sequence A:  GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPD
YHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNC
YIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQEL
B:  TNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHK
IIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIY
NKPTDDIVLMAQTLEKIFLQKVASMPQ
C:  TNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHK
IIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIY
NKPTDDIVLMAQTLEKIFLQKVASMPQ
Description


Functional site

1) chain A
residue 97
type
sequence W
description binding site for residue G7V A 301
source : AC1

2) chain A
residue 98
type
sequence P
description binding site for residue G7V A 301
source : AC1

3) chain A
residue 99
type
sequence F
description binding site for residue G7V A 301
source : AC1

4) chain A
residue 107
type
sequence K
description binding site for residue G7V A 301
source : AC1

5) chain A
residue 108
type
sequence L
description binding site for residue G7V A 301
source : AC1

6) chain A
residue 110
type
sequence L
description binding site for residue G7V A 301
source : AC1

7) chain A
residue 152
type
sequence C
description binding site for residue G7V A 301
source : AC1

8) chain A
residue 156
type
sequence N
description binding site for residue G7V A 301
source : AC1

9) chain B
residue 94
type
sequence Q
description binding site for residue G7V A 301
source : AC1

10) chain A
residue 100
type
sequence R
description binding site for residue SO4 A 302
source : AC2

11) chain A
residue 160
type
sequence D
description binding site for residue EDO A 303
source : AC3

12) chain A
residue 161
type
sequence D
description binding site for residue EDO A 303
source : AC3

13) chain A
residue 162
type
sequence I
description binding site for residue EDO A 303
source : AC3

14) chain A
residue 94
type
sequence Q
description binding site for residue EDO A 304
source : AC4

15) chain A
residue 97
type
sequence W
description binding site for residue EDO A 304
source : AC4

16) chain B
residue 94
type
sequence Q
description binding site for residue EDO A 304
source : AC4

17) chain B
residue 97
type
sequence W
description binding site for residue EDO A 304
source : AC4

18) chain B
residue 165
type
sequence M
description binding site for residue EDO A 304
source : AC4

19) chain A
residue 94
type
sequence Q
description binding site for residue G7V B 301
source : AC5

20) chain B
residue 97
type
sequence W
description binding site for residue G7V B 301
source : AC5

21) chain B
residue 98
type
sequence P
description binding site for residue G7V B 301
source : AC5

22) chain B
residue 99
type
sequence F
description binding site for residue G7V B 301
source : AC5

23) chain B
residue 110
type
sequence L
description binding site for residue G7V B 301
source : AC5

24) chain B
residue 152
type
sequence C
description binding site for residue G7V B 301
source : AC5

25) chain B
residue 156
type
sequence N
description binding site for residue G7V B 301
source : AC5

26) chain B
residue 97
type
sequence W
description binding site for residue 03S B 302
source : AC6

27) chain B
residue 100
type
sequence R
description binding site for residue 03S B 302
source : AC6

28) chain C
residue 132
type
sequence N
description binding site for residue 03S B 302
source : AC6

29) chain C
residue 134
type
sequence Y
description binding site for residue 03S B 302
source : AC6

30) chain B
residue 160
type
sequence D
description binding site for residue EDO B 303
source : AC7

31) chain B
residue 161
type
sequence D
description binding site for residue EDO B 303
source : AC7

32) chain B
residue 162
type
sequence I
description binding site for residue EDO B 303
source : AC7

33) chain A
residue 80
type
sequence Q
description binding site for residue G7V C 301
source : AC8

34) chain A
residue 84
type
sequence K
description binding site for residue G7V C 301
source : AC8

35) chain A
residue 181
type
sequence P
description binding site for residue G7V C 301
source : AC8

36) chain C
residue 97
type
sequence W
description binding site for residue G7V C 301
source : AC8

37) chain C
residue 98
type
sequence P
description binding site for residue G7V C 301
source : AC8

38) chain C
residue 101
type
sequence Q
description binding site for residue G7V C 301
source : AC8

39) chain C
residue 110
type
sequence L
description binding site for residue G7V C 301
source : AC8

40) chain C
residue 156
type
sequence N
description binding site for residue G7V C 301
source : AC8

41) chain A
residue 84
type MOD_RES
sequence K
description Phosphoserine => ECO:0007744|PubMed:19690332
source Swiss-Prot : SWS_FT_FI2

42) chain B
residue 84
type MOD_RES
sequence K
description Phosphoserine => ECO:0007744|PubMed:19690332
source Swiss-Prot : SWS_FT_FI2

43) chain C
residue 84
type MOD_RES
sequence K
description Phosphoserine => ECO:0007744|PubMed:19690332
source Swiss-Prot : SWS_FT_FI2

44) chain A
residue 159
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:37731000, ECO:0007744|PDB:8SB6
source Swiss-Prot : SWS_FT_FI1

45) chain B
residue 159
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:37731000, ECO:0007744|PDB:8SB6
source Swiss-Prot : SWS_FT_FI1

46) chain C
residue 159
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:37731000, ECO:0007744|PDB:8SB6
source Swiss-Prot : SWS_FT_FI1

47) chain A
residue 96-155
type prosite
sequence AWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYY
WAASECMQDFNTMFTNCYIY
description BROMODOMAIN_1 Bromodomain signature. AwpFrqpvDavklglpDYHkiIkqpMdmgtIkrrlenny..Ywaasecmqdfnt.MftNCyiY
source prosite : PS00633


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