eF-site ID 6d9k-ACFGHJ PDB Code 6d9k Chain A, C, F, G, H, J click to enlarge Title Ternary RsAgo Complex with Guide RNA and Target DNA Containing A-G Non-canonical Pair Classification RNA BINDING PROTEIN/RNA/DNA Compound Uncharacterized protein Source (6D9K) Sequence A:  RQLVSNGFEVNLPDQVEVIVRDLPDPSKVKEERTRLMGYW FVHWFDGKLFHLRIKAGGPNVDGEHRAIRTAEHPWLLRAR LDDALEEALPKYAAVKKRPFTFLAQKDELIDAAATAAGLS HRLLNSFKVIPRFALSPKIYEPVDGTTRVGVFVTIGMRYD IEASLRDLLEAGIDLRGMYVVRRKRQPGERGLLGRVRAIS DDMVQLFEETDLASVNVNDAKLEGSKENFTRCLSALLGHN YKKLLNALDDQEAGYRTGPRFDDAVRRMGEFLAKKPIRLA DNINAQVGDRIVFSNEGQARNVRLAPKVEYVFDRTGAKSA EYAWRGLSQFGPFDRPSFANRSPRILVVYPSSTQGKVENF LSAFRDGMGSNYSGFSKGFVDLMGLTKVEFVMCPVEVSSA DRNGAHTKYNSAIEDKLAGAGEVHAGIVVLFEDHARLPDD RNPYIHTKSLLLTLGVPTQQVRMPTVLLEPKSLQYTLQNF SIATYAKLNGTPWTVNHDKAINDELVVGMGLAELSGSRTE KRQRFVGITTVFAGDGSYLLGNVSKECEYEGYSDAIRESM TGILRELKKRNNWRPGDTVRVVFHAHRPLKRVDVASIVFE CTREIGSDQNIQMAFVTVSHDHPFVLIDRSERGLEAYKGS TARKGVFAPPRGAISRVGRLTRLLAVNSPQLIKRANTPLP TPLLVSLHPDSTFKDVDYLAEQALKFTSLSWRSTLPAATP VTIFYSERIAELLGRLKSIPNWSSANLNIKLKWSRWFL C:  UUACUGCACAGGUGACGA F:  RQLVSNGFEVNLPDQVEVIVRDLPDPSKVKEERTRLMGYW FVHWFDGKLFHLRIKAGGPNVDGEHRAIRTAEHPWLLRAR LDDALEEALPKYAAVKKRPFTFLAQKDELIDAAATAAGLS HRLLNSFKVIPRFALSPKIYEPVDGTTRVGVFVTIGMRYD IEASLRDLLEAGIDLRGMYVVRRKRQRGLLGRVRAISDDM VQLFEETDLASVNVNDAKLEGSKENFTRCLSALLGHNYKK LLNALDDQEAGYRTGPRFDDAVRRMGEFLAKKPIRLADNI NAQVGDRIVFSNEGQARNVRLAPKVEYVFDRTGAKSAEYA WRGLSQFGPFDRPSFANRSPRILVVYPSSTQGKVENFLSA FRDGMGSNYSGFSKGFVDLMGLTKVEFVMCPVEVSSADRN GAHTKYNSAIEDKLAGAGEVHAGIVVLFEDHARLPDDRNP YIHTKSLLLTLGVPTQQVRMPTVLLEPKSLQYTLQNFSIA TYAKLNGTPWTVNHDKAINDELVVGMGLAELSGSRTEKRQ RFVGITTVFAGDGSYLLGNVSKECEYEGYSDAIRESMTGI LRELKKRNNWRPGDTVRVVFHAHRPLKRVDVASIVFECTR EIGSDQNIQMAFVTVSHDHPFVLIDRSERGLEAYKGSTAR KGVFAPPRGAISRVGRLTRLLAVNSPQLIKRANTPLPTPL LVSLHPDSTFKDVDYLAEQALKFTSLSWRSTLPAATPVTI FYSERIAELLGRLKSIPNWSSANLNIKLKWSRWFL G:  TCGTCACCTGGGCAGTAAC H:  UUACUGCACAGGUGACGA J:  TGTCGTCACCTGGGCAGTAAC Description Functional site 1) chain A residue 111 type sequence Y description binding site for residue ACT A 801 source : AC1 2) chain A residue 377 type sequence E description binding site for residue MPD A 802 source : AC2 3) chain A residue 384 type sequence R description binding site for residue MPD A 802 source : AC2 4) chain A residue 777 type sequence L description binding site for residue MG C 101 source : AC3 5) chain C residue 1 type sequence U description binding site for residue MG C 101 source : AC3 6) chain C residue 3 type sequence A description binding site for residue MG C 101 source : AC3 7) chain F residue 377 type sequence E description binding site for residue ACT F 801 source : AC4 8) chain F residue 384 type sequence R description binding site for residue ACT F 801 source : AC4 9) chain F residue 604 type sequence A description binding site for residue ACT F 802 source : AC5 10) chain F residue 608 type sequence L description binding site for residue ACT F 802 source : AC5 11) chain F residue 777 type sequence L description binding site for residue MG H 101 source : AC6 12) chain H residue 1 type sequence U description binding site for residue MG H 101 source : AC6 13) chain H residue 3 type sequence A description binding site for residue MG H 101 source : AC6 14) chain H residue 11 type sequence G description binding site for residue MPD H 102 source : AC7 15) chain J residue -7 type sequence C description binding site for residue MPD H 102 source : AC7 16) chain J residue -6 type sequence C description binding site for residue MPD H 102 source : AC7 17) chain A residue 777 type BINDING sequence L description BINDING => ECO:0000269|PubMed:27325485, ECO:0000269|PubMed:29996105, ECO:0000312|PDB:5AWH, ECO:0000312|PDB:6D8P source Swiss-Prot : SWS_FT_FI1 18) chain F residue 777 type BINDING sequence L description BINDING => ECO:0000269|PubMed:27325485, ECO:0000269|PubMed:29996105, ECO:0000312|PDB:5AWH, ECO:0000312|PDB:6D8P source Swiss-Prot : SWS_FT_FI1

Display surface Download Links