eF-site ID 6d8p-B
PDB Code 6d8p
Chain B

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Title Ternary RsAgo Complex Containing Guide RNA Paired with Target DNA
Classification RNA BINDING PROTEIN
Compound Uncharacterized protein
Source (6D8P)
Sequence B:  RQLVSNGFEVNLPDQVEVIVRDLPDPSKVKEERTRLMGYW
FVHWFDGKLFHLRIKAGGPNVDGEHRAIRTAEHPWLLRAR
LDDALEEALPKYAAVKKRPFTFLAQKDELIDAAATAAGLS
HRLLNSFKVIPRFALSPKIYEPVDGTTRVGVFVTIGMRYD
IEASLRDLLEAGIDLRGMYVVRRKRQRGLLGRVSDDMVQL
FEETDLASVNVNDAKLEGSKENFTRCLSALLGHNYKKLLN
ALDDQEAGYRTGPRFDDAVRRMGEFLAKKPIRLADNINAQ
VGDRIVFSNEGQARNVRLAPKVEYVFDRTGAKSAEYAWRG
LSQFGPFDRPSFANRSPRILVVYPSSTQGKVENFLSAFRD
GMGSNYSGFSKGFVDLMGLTKVEFVMCPVEVSSADRNGAH
TKYNSAIEDKLAGAGEVHAGIVVLFEDHARLPDDRNPYIH
TKSLLLTLGVPTQQVRMPTVLLEPKSLQYTLQNFSIATYA
KLNGTPWTVNHDKAINDELVVGMGLAELSGSRTEKRQRFV
GITTVFAGDGSYLLGNVSKECEYEGYSDAIRESMTGILRE
LKKRNNWRPGDTVRVVFHAHRPLKRVDVASIVFECTREIG
SDQNIQMAFVTVSHDHPFVLIDRSERGLEAYKGSTARKGV
FAPPRGAISRVGRLTRLLAVNSPQLIKRANTPLPTPLLVS
LHPDSTFKDVDYLAEQALKFTSLSWRSTLPAATPVTIFYS
ERIAELLGRLKSIPNWSSANLNIKLKWSRWFL
Description


Functional site

1) chain B
residue 20
type
sequence R
description binding site for residue ACT B 801
source : AE3

2) chain B
residue 384
type
sequence R
description binding site for residue ACT B 802
source : AE4

3) chain B
residue 407
type
sequence V
description binding site for residue ACT B 802
source : AE4

4) chain B
residue 571
type
sequence Y
description binding site for residue ACT B 803
source : AE5

5) chain B
residue 606
type
sequence R
description binding site for residue ACT B 803
source : AE5

6) chain B
residue 639
type
sequence H
description binding site for residue ACT B 804
source : AE6

7) chain B
residue 685
type
sequence V
description binding site for residue ACT B 804
source : AE6

8) chain B
residue 700
type
sequence T
description binding site for residue ACT B 804
source : AE6

9) chain B
residue 702
type
sequence L
description binding site for residue ACT B 804
source : AE6

10) chain B
residue 737
type
sequence A
description binding site for residue ACT B 804
source : AE6

11) chain B
residue 377
type
sequence E
description binding site for residue CAC B 805
source : AE7

12) chain B
residue 384
type
sequence R
description binding site for residue CAC B 805
source : AE7

13) chain B
residue 409
type
sequence F
description binding site for residue CAC B 805
source : AE7

14) chain B
residue 777
type
sequence L
description binding site for residue MG C 101
source : AE8

15) chain B
residue 115
type
sequence K
description binding site for residue MPD C 102
source : AE9

16) chain B
residue 746
type
sequence E
description binding site for residue ACT G 101
source : AF1

17) chain B
residue 777
type BINDING
sequence L
description BINDING => ECO:0000269|PubMed:27325485, ECO:0000269|PubMed:29996105, ECO:0000312|PDB:5AWH, ECO:0000312|PDB:6D8P
source Swiss-Prot : SWS_FT_FI1


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