eF-site ID 6d8p-ABCEGJ PDB Code 6d8p Chain A, B, C, E, G, J click to enlarge Title Ternary RsAgo Complex Containing Guide RNA Paired with Target DNA Classification RNA BINDING PROTEIN Compound Uncharacterized protein Source (6D8P) Sequence A:  RQLVSNGFEVNLPDQVEVIVRDLPDPSKVKEERTRLMGYW FVHWFDGKLFHLRIKAGGPNVDGEHRAIRTAEHPWLLRAR LDDALEEALPKYAAVKKRPFTFLAQKDELIDAAATAAGLS HRLLNSFKVIPRFALSPKIYEPVDGTTRVGVFVTIGMRYD IEASLRDLLEAGIDLRGMYVVRRKRQPGERGLLGRVRAIS DDMVQLFEETDLASVNVNDAKLEGSKENFTRCLSALLGHN YKKLLNALDDQEAGYRTGPRFDDAVRRMGEFLAKKPIRLA DNINAQVGDRIVFSNEGQARNVRLAPKVEYVFDRTGAKSA EYAWRGLSQFGPFDRPSFANRSPRILVVYPSSTQGKVENF LSAFRDGMGSNYSGFSKGFVDLMGLTKVEFVMCPVEVSSA DRNGAHTKYNSAIEDKLAGAGEVHAGIVVLFEDHARLPDD RNPYIHTKSLLLTLGVPTQQVRMPTVLLEPKSLQYTLQNF SIATYAKLNGTPWTVNHDKAINDELVVGMGLAELSGSRTE KRQRFVGITTVFAGDGSYLLGNVSKECEYEGYSDAIRESM TGILRELKKRNNWRPGDTVRVVFHAHRPLKRVDVASIVFE CTREIGSDQNIQMAFVTVSHDHPFVLIDRSERGLEAYKGS TARKGVFAPPRGAISRVGRLTRLLAVNSPQLIKRANTPLP TPLLVSLHPDSTFKDVDYLAEQALKFTSLSWRSTLPAATP VTIFYSERIAELLGRLKSIPNWSSANLNIKLKWSRWFL B:  RQLVSNGFEVNLPDQVEVIVRDLPDPSKVKEERTRLMGYW FVHWFDGKLFHLRIKAGGPNVDGEHRAIRTAEHPWLLRAR LDDALEEALPKYAAVKKRPFTFLAQKDELIDAAATAAGLS HRLLNSFKVIPRFALSPKIYEPVDGTTRVGVFVTIGMRYD IEASLRDLLEAGIDLRGMYVVRRKRQRGLLGRVSDDMVQL FEETDLASVNVNDAKLEGSKENFTRCLSALLGHNYKKLLN ALDDQEAGYRTGPRFDDAVRRMGEFLAKKPIRLADNINAQ VGDRIVFSNEGQARNVRLAPKVEYVFDRTGAKSAEYAWRG LSQFGPFDRPSFANRSPRILVVYPSSTQGKVENFLSAFRD GMGSNYSGFSKGFVDLMGLTKVEFVMCPVEVSSADRNGAH TKYNSAIEDKLAGAGEVHAGIVVLFEDHARLPDDRNPYIH TKSLLLTLGVPTQQVRMPTVLLEPKSLQYTLQNFSIATYA KLNGTPWTVNHDKAINDELVVGMGLAELSGSRTEKRQRFV GITTVFAGDGSYLLGNVSKECEYEGYSDAIRESMTGILRE LKKRNNWRPGDTVRVVFHAHRPLKRVDVASIVFECTREIG SDQNIQMAFVTVSHDHPFVLIDRSERGLEAYKGSTARKGV FAPPRGAISRVGRLTRLLAVNSPQLIKRANTPLPTPLLVS LHPDSTFKDVDYLAEQALKFTSLSWRSTLPAATPVTIFYS ERIAELLGRLKSIPNWSSANLNIKLKWSRWFL C:  UUACUGCACAGGUGACGA E:  UUACUGCACAGGUGACGA G:  GTCGTCACCTGTGCAGTAAC J:  TCGTCACCTGTGCAGTAAC Description Functional site 1) chain A residue 108 type sequence L description binding site for residue MG A 801 source : AC1 2) chain A residue 109 type sequence P description binding site for residue MG A 801 source : AC1 3) chain A residue 110 type sequence K description binding site for residue MG A 801 source : AC1 4) chain A residue 395 type sequence S description binding site for residue MG A 804 source : AC2 5) chain A residue 396 type sequence K description binding site for residue MG A 804 source : AC2 6) chain A residue 451 type sequence E description binding site for residue MG A 805 source : AC3 7) chain A residue 482 type sequence M description binding site for residue MG A 805 source : AC3 8) chain A residue 173 type sequence T description binding site for residue ACT A 807 source : AC4 9) chain A residue 641 type sequence H description binding site for residue ACT A 807 source : AC4 10) chain A residue 642 type sequence P description binding site for residue ACT A 807 source : AC4 11) chain A residue 396 type sequence K description binding site for residue ACT A 808 source : AC5 12) chain A residue 528 type sequence M description binding site for residue ACT A 809 source : AC6 13) chain A residue 516 type sequence H description binding site for residue ACT A 810 source : AC7 14) chain A residue 557 type sequence Y description binding site for residue ACT A 810 source : AC7 15) chain A residue 717 type sequence Y description binding site for residue ACT A 810 source : AC7 16) chain A residue 721 type sequence Q description binding site for residue ACT A 810 source : AC7 17) chain A residue 724 type sequence K description binding site for residue ACT A 810 source : AC7 18) chain A residue 761 type sequence W description binding site for residue ACT A 811 source : AC8 19) chain A residue 113 type sequence A description binding site for residue ACT A 812 source : AC9 20) chain A residue 114 type sequence V description binding site for residue ACT A 812 source : AC9 21) chain A residue 578 type sequence S description binding site for residue ACT A 813 source : AD1 22) chain A residue 494 type sequence Y description binding site for residue ACT A 814 source : AD2 23) chain A residue 497 type sequence Q description binding site for residue ACT A 814 source : AD2 24) chain A residue 498 type sequence N description binding site for residue ACT A 814 source : AD2 25) chain A residue 733 type sequence T description binding site for residue ACT A 814 source : AD2 26) chain J residue 3 type sequence A description binding site for residue ACT A 814 source : AD2 27) chain J residue 4 type sequence A description binding site for residue ACT A 814 source : AD2 28) chain A residue 455 type sequence R description binding site for residue ACT A 815 source : AD3 29) chain A residue 319 type sequence R description binding site for residue ACT A 816 source : AD4 30) chain A residue 322 type sequence R description binding site for residue ACT A 816 source : AD4 31) chain A residue 716 type sequence D description binding site for residue ACT A 816 source : AD4 32) chain A residue 21 type sequence Q description binding site for residue CAC A 818 source : AD5 33) chain A residue 22 type sequence L description binding site for residue CAC A 818 source : AD5 34) chain A residue 111 type sequence Y description binding site for residue CAC A 819 source : AD6 35) chain A residue 290 type sequence F description binding site for residue CAC A 819 source : AD6 36) chain A residue 384 type sequence R description binding site for residue CAC A 820 source : AD7 37) chain A residue 409 type sequence F description binding site for residue CAC A 820 source : AD7 38) chain A residue 777 type sequence L description binding site for residue MG E 101 source : AD8 39) chain E residue 1 type sequence U description binding site for residue MG E 101 source : AD8 40) chain E residue 3 type sequence A description binding site for residue MG E 101 source : AD8 41) chain E residue 5 type sequence U description binding site for residue ACT E 102 source : AD9 42) chain E residue 6 type sequence G description binding site for residue ACT E 102 source : AD9 43) chain E residue 7 type sequence C description binding site for residue ACT E 103 source : AE1 44) chain J residue -12 type sequence C description binding site for residue ACT J 101 source : AE2 45) chain J residue -11 type sequence G description binding site for residue ACT J 101 source : AE2 46) chain J residue -10 type sequence T description binding site for residue ACT J 101 source : AE2 47) chain B residue 20 type sequence R description binding site for residue ACT B 801 source : AE3 48) chain B residue 384 type sequence R description binding site for residue ACT B 802 source : AE4 49) chain B residue 407 type sequence V description binding site for residue ACT B 802 source : AE4 50) chain B residue 571 type sequence Y description binding site for residue ACT B 803 source : AE5 51) chain B residue 606 type sequence R description binding site for residue ACT B 803 source : AE5 52) chain B residue 639 type sequence H description binding site for residue ACT B 804 source : AE6 53) chain B residue 685 type sequence V description binding site for residue ACT B 804 source : AE6 54) chain B residue 700 type sequence T description binding site for residue ACT B 804 source : AE6 55) chain B residue 702 type sequence L description binding site for residue ACT B 804 source : AE6 56) chain B residue 737 type sequence A description binding site for residue ACT B 804 source : AE6 57) chain B residue 377 type sequence E description binding site for residue CAC B 805 source : AE7 58) chain B residue 384 type sequence R description binding site for residue CAC B 805 source : AE7 59) chain B residue 409 type sequence F description binding site for residue CAC B 805 source : AE7 60) chain B residue 777 type sequence L description binding site for residue MG C 101 source : AE8 61) chain C residue 1 type sequence U description binding site for residue MG C 101 source : AE8 62) chain C residue 3 type sequence A description binding site for residue MG C 101 source : AE8 63) chain B residue 115 type sequence K description binding site for residue MPD C 102 source : AE9 64) chain C residue 11 type sequence G description binding site for residue MPD C 102 source : AE9 65) chain C residue 12 type sequence G description binding site for residue MPD C 102 source : AE9 66) chain G residue -7 type sequence C description binding site for residue MPD C 102 source : AE9 67) chain B residue 746 type sequence E description binding site for residue ACT G 101 source : AF1 68) chain G residue -5 type sequence T description binding site for residue ACT G 101 source : AF1 69) chain G residue -4 type sequence G description binding site for residue ACT G 101 source : AF1 70) chain A residue 777 type BINDING sequence L description BINDING => ECO:0000269|PubMed:27325485, ECO:0000269|PubMed:29996105, ECO:0000312|PDB:5AWH, ECO:0000312|PDB:6D8P source Swiss-Prot : SWS_FT_FI1 71) chain B residue 777 type BINDING sequence L description BINDING => ECO:0000269|PubMed:27325485, ECO:0000269|PubMed:29996105, ECO:0000312|PDB:5AWH, ECO:0000312|PDB:6D8P source Swiss-Prot : SWS_FT_FI1

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