eF-site ID 6d8p-A
PDB Code 6d8p
Chain A

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Title Ternary RsAgo Complex Containing Guide RNA Paired with Target DNA
Classification RNA BINDING PROTEIN
Compound Uncharacterized protein
Source (6D8P)
Sequence A:  RQLVSNGFEVNLPDQVEVIVRDLPDPSKVKEERTRLMGYW
FVHWFDGKLFHLRIKAGGPNVDGEHRAIRTAEHPWLLRAR
LDDALEEALPKYAAVKKRPFTFLAQKDELIDAAATAAGLS
HRLLNSFKVIPRFALSPKIYEPVDGTTRVGVFVTIGMRYD
IEASLRDLLEAGIDLRGMYVVRRKRQPGERGLLGRVRAIS
DDMVQLFEETDLASVNVNDAKLEGSKENFTRCLSALLGHN
YKKLLNALDDQEAGYRTGPRFDDAVRRMGEFLAKKPIRLA
DNINAQVGDRIVFSNEGQARNVRLAPKVEYVFDRTGAKSA
EYAWRGLSQFGPFDRPSFANRSPRILVVYPSSTQGKVENF
LSAFRDGMGSNYSGFSKGFVDLMGLTKVEFVMCPVEVSSA
DRNGAHTKYNSAIEDKLAGAGEVHAGIVVLFEDHARLPDD
RNPYIHTKSLLLTLGVPTQQVRMPTVLLEPKSLQYTLQNF
SIATYAKLNGTPWTVNHDKAINDELVVGMGLAELSGSRTE
KRQRFVGITTVFAGDGSYLLGNVSKECEYEGYSDAIRESM
TGILRELKKRNNWRPGDTVRVVFHAHRPLKRVDVASIVFE
CTREIGSDQNIQMAFVTVSHDHPFVLIDRSERGLEAYKGS
TARKGVFAPPRGAISRVGRLTRLLAVNSPQLIKRANTPLP
TPLLVSLHPDSTFKDVDYLAEQALKFTSLSWRSTLPAATP
VTIFYSERIAELLGRLKSIPNWSSANLNIKLKWSRWFL
Description


Functional site

1) chain A
residue 108
type
sequence L
description binding site for residue MG A 801
source : AC1

2) chain A
residue 109
type
sequence P
description binding site for residue MG A 801
source : AC1

3) chain A
residue 110
type
sequence K
description binding site for residue MG A 801
source : AC1

4) chain A
residue 395
type
sequence S
description binding site for residue MG A 804
source : AC2

5) chain A
residue 396
type
sequence K
description binding site for residue MG A 804
source : AC2

6) chain A
residue 451
type
sequence E
description binding site for residue MG A 805
source : AC3

7) chain A
residue 482
type
sequence M
description binding site for residue MG A 805
source : AC3

8) chain A
residue 173
type
sequence T
description binding site for residue ACT A 807
source : AC4

9) chain A
residue 641
type
sequence H
description binding site for residue ACT A 807
source : AC4

10) chain A
residue 642
type
sequence P
description binding site for residue ACT A 807
source : AC4

11) chain A
residue 396
type
sequence K
description binding site for residue ACT A 808
source : AC5

12) chain A
residue 528
type
sequence M
description binding site for residue ACT A 809
source : AC6

13) chain A
residue 516
type
sequence H
description binding site for residue ACT A 810
source : AC7

14) chain A
residue 557
type
sequence Y
description binding site for residue ACT A 810
source : AC7

15) chain A
residue 717
type
sequence Y
description binding site for residue ACT A 810
source : AC7

16) chain A
residue 721
type
sequence Q
description binding site for residue ACT A 810
source : AC7

17) chain A
residue 724
type
sequence K
description binding site for residue ACT A 810
source : AC7

18) chain A
residue 761
type
sequence W
description binding site for residue ACT A 811
source : AC8

19) chain A
residue 113
type
sequence A
description binding site for residue ACT A 812
source : AC9

20) chain A
residue 114
type
sequence V
description binding site for residue ACT A 812
source : AC9

21) chain A
residue 578
type
sequence S
description binding site for residue ACT A 813
source : AD1

22) chain A
residue 494
type
sequence Y
description binding site for residue ACT A 814
source : AD2

23) chain A
residue 497
type
sequence Q
description binding site for residue ACT A 814
source : AD2

24) chain A
residue 498
type
sequence N
description binding site for residue ACT A 814
source : AD2

25) chain A
residue 733
type
sequence T
description binding site for residue ACT A 814
source : AD2

26) chain A
residue 455
type
sequence R
description binding site for residue ACT A 815
source : AD3

27) chain A
residue 319
type
sequence R
description binding site for residue ACT A 816
source : AD4

28) chain A
residue 322
type
sequence R
description binding site for residue ACT A 816
source : AD4

29) chain A
residue 716
type
sequence D
description binding site for residue ACT A 816
source : AD4

30) chain A
residue 21
type
sequence Q
description binding site for residue CAC A 818
source : AD5

31) chain A
residue 22
type
sequence L
description binding site for residue CAC A 818
source : AD5

32) chain A
residue 111
type
sequence Y
description binding site for residue CAC A 819
source : AD6

33) chain A
residue 290
type
sequence F
description binding site for residue CAC A 819
source : AD6

34) chain A
residue 384
type
sequence R
description binding site for residue CAC A 820
source : AD7

35) chain A
residue 409
type
sequence F
description binding site for residue CAC A 820
source : AD7

36) chain A
residue 777
type
sequence L
description binding site for residue MG E 101
source : AD8

37) chain A
residue 777
type BINDING
sequence L
description BINDING => ECO:0000269|PubMed:27325485, ECO:0000269|PubMed:29996105, ECO:0000312|PDB:5AWH, ECO:0000312|PDB:6D8P
source Swiss-Prot : SWS_FT_FI1


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