eF-site ID 6d73-ABCD
PDB Code 6d73
Chain A, B, C, D
Title Cryo-EM structure of the zebrafish TRPM2 channel in the presence of Ca2+
Classification TRANSPORT PROTEIN
Compound Transient receptor potential cation channel, subfamily M
Source (6D73)
Sequence A:  LASWIKENIKKKEWDKHRHVRETPTDAFGDISFGGLGQKT
GKYVRVSSDTSCENLYQLMTEQWKLRSPNLLISVTGGAKN
FYIKTHLKDKFRRGLIKVAQTTGAWILTGGTHAGVMKHVG
MAVRDYTLSSGSMEGQIVVIGVAPWGVIHNRSTLIHPEGR
FPAYYSLDEQGQGRLSCLDINHTHFLLVDDGTQGHYGVEI
ELRARLEKLISKLSLGNRESGVTIPVVCVVLDGGPGTLNT
IYNSMLNHTPCVVLEGSGRLADVIAHVASVPVSKVTMALI
NRLLKRFFMQEYKNFTELQIIEWTKKIQDILRMPHLLTVF
RIDEDKNYDVDVAILQALLKASRSDEHAGRHCWERQLELA
VAWNRVDIAESEIFTEESQWTSSDLHPAMFSALVGDKPEF
VRLLLENGVCVREFLEREETLCELYSHLPSCFFLRKLAKR
VQCLSHVSEEVRHLLGSFTQPLYIASRYKDTVWDPGRDLF
LWAVVQNNRELAEIGWEQCRDCIAAALAASKILRKLAQES
GEDDSEEATEMLELANHYEKQAIGVFSECHSWDAQRAQKL
LIRISPSWGRSTCLWLALEAHDKSFIAHSGVQALLTQIWC
GELSVDNPHWKVLLCMIFFPLIYTGFLTFRRDEDIQRQAE
RTEQCSSRLMSFLKSPQVKFYWNIASYFGFLWLFAVVLMI
DFQTSPSWRELLLYVWLTSLVCEEIRQLYHDFDGSGFRRK
AKMYIKDLWNILDVLSIVLFIAGLICRLQASDTVFYIGKV
ILCIDFIIFCLRLMAIFSISRTLGPKIIIVRRMMLDLFFF
MFLLSIWVVAYGVAKQGILIENEERLNWIIRGAVYEPYIT
IFGNFPTNIDNTLFDISSCSVNASDPLKPKCPMLNADNTP
VFPEWLTIMMLCVYLLFANILLLNLLIAIFNYTFQEVQDN
TDTIWKFQRYELIKEYHSRPALPPPFILLSHLILFIRGVF
LRHKNFRQELEQTEEEELLSWEAYMKDNYLASTRQDESQS
VEHRIHDTAEKVGAMSELLEREQEMVXXXXXXXXXXXXXX
XXXXXXXXDEEAPHMFARQLQYPDSTVRRFPVPEEKVSWE
VNFSPYQPPVYNQKHRNPGGRTGIRGKGALNTLGPNHILH
PIFTRWRDKVLEFLAVWRWALLGGPALAQVLERILGKKLN
EGEEVYKGYVDDSRNTDNAWVETSIITLHCDKNTMADLNH
MVELQWREVSSDACRCSYQREALRQIA
B:  LASWIKENIKKKEQWDKHRHVRETPTDAFGDISFGGLGQK
TGKYVRVSSDTSCENLYQLMTEQWKLRSPNLLISVTGGAK
NFYIKTHLKDKFRRGLIKVAQTTGAWILTGGTHAGVMKHV
GMAVRDYTLSSGSMEGQIVVIGVAPWGVIHNRSTLIHPEG
RFPAYYSLDEQGQGRLSCLDINHTHFLLVDDGTQGHYGVE
IELRARLEKLISKLSLGGVTIPVVCVVLDGGPGTLNTIYN
SMLNHTPCVVLEGSGRLADVIAHVASVPVSKVTMALINRL
LKRFFMQEYKNFTELQIIEWTKKIQDILRMPHLLTVFRID
EDKNYDVDVAILQALLKASRSDEHAGRHCWERQLELAVAW
NRVDIAESEIFTEESQWTSSDLHPAMFSALVGDKPEFVRL
LLENGVCVREFLEREETLCELYSHLPSCFFLRKLAKRVQE
PLPGSRKVCLSHVSEEVRHLLGSFTQPLYIASRYDTVWDP
GRDLFLWAVVQNNRELAEIGWEQCRDCIAAALAASKILRK
LAQESGEDDSEEATEMLELANHYEKQAIGVFSECHSWDAQ
RAQKLLIRISPSWGRSTCLWLALEAHDKSFIAHSGVQALL
TQIWCGELSVDNPHWKVLLCMIFFPLIYTGFLTFRRDEDI
QRQAERTEQQKNCSSRLMSFLKSPQVKFYWNIASYFGFLW
LFAVVLMIDFQTSPSWRELLLYVWLTSLVCEEIRQLYHDG
FRRKAKMYIKDLWNILDVLSIVLFIAGLICRLQASDTVFY
IGKVILCIDFIIFCLRLMAIFSISRTLGPKIIIVRRMMLD
LFFFMFLLSIWVVAYGVAKQGILIENEERLNWIIRGAVYE
PYITIFGNFPTNIDNTLFDISSCSVNASDPLKPKCPMLNA
DNTPVFPEWLTIMMLCVYLLFANILLLNLLIAIFNYTFQE
VQDNTDTIWKFQRYELIKEYHSRPALPPPFILLSHLILFI
RGVFLRHKNFRQELEQTEEEELLSWEAYMKDNYLASTRQD
ESQSVEHRIHDTAEKVGAMSELLEREQEMVXXXXXXXXXX
XXXXXXXXXXXXEEAPHMFARQLQYPDSTVRRFPVPEEKV
SWEVNFSPYQPPVYNQQDKHRNPGGRTGIRGKGALNTLGP
NHILHPIFTRWRDAEHKVLEFLAVWEDAEKRWALLGGPAQ
PDLAQVLERILGKKLKTLLKAGEEVYKGYVDDSRNTDNAW
VETSIITLHTPLMADLNHMVESSLSSHQPLQWREVSSDAC
RCSYQREALRQIAHHH
C:  LASWIKENIKKKEWDKHRHVRETPTDAFGDISFGGLGQKT
GKYVRVSSDTSCENLYQLMTEQWKLRSPNLLISVTGGAKN
FYIKTHLKDKFRRGLIKVAQTTGAWILTGGTHAGVMKHVG
MAVRDYTLSSGSMEGQIVVIGVAPWGVIHNRSTLIHPEGR
FPAYYSLDEQGQGRLSCLDINHTHFLLVDDGTQGHYGVEI
ELRARLEKLISKLSLGNRESGVTIPVVCVVLDGGPGTLNT
IYNSMLNHTPCVVLEGSGRLADVIAHVASVPVSKVTMALI
NRLLKRFFMQEYKNFTELQIIEWTKKIQDILRMPHLLTVF
RIDEDKNYDVDVAILQALLKASRSDEHAGRHCWERQLELA
VAWNRVDIAESEIFTEESQWTSSDLHPAMFSALVGDKPEF
VRLLLENGVCVREFLEREETLCELYSHLPSCFFLRKLAKR
VQCLSHVSEEVRHLLGSFTQPLYIASRYKDTVWDPGRDLF
LWAVVQNNRELAEIGWEQCRDCIAAALAASKILRKLAQES
GEDDSEEATEMLELANHYEKQAIGVFSECHSWDAQRAQKL
LIRISPSWGRSTCLWLALEAHDKSFIAHSGVQALLTQIWC
GELSVDNPHWKVLLCMIFFPLIYTGFLTFRRDEDIQRQAE
RTEQCSSRLMSFLKSPQVKFYWNIASYFGFLWLFAVVLMI
DFQTSPSWRELLLYVWLTSLVCEEIRQLYHDFDGSGFRRK
AKMYIKDLWNILDVLSIVLFIAGLICRLQASDTVFYIGKV
ILCIDFIIFCLRLMAIFSISRTLGPKIIIVRRMMLDLFFF
MFLLSIWVVAYGVAKQGILIENEERLNWIIRGAVYEPYIT
IFGNFPTNIDNTLFDISSCSVNASDPLKPKCPMLNADNTP
VFPEWLTIMMLCVYLLFANILLLNLLIAIFNYTFQEVQDN
TDTIWKFQRYELIKEYHSRPALPPPFILLSHLILFIRGVF
LRHKNFRQELEQTEEEELLSWEAYMKDNYLASTRQDESQS
VEHRIHDTAEKVGAMSELLEREQEMVXXXXXXXXXXXXXX
XXXXXXXXDEEAPHMFARQLQYPDSTVRRFPVPEEKVSWE
VNFSPYQPPVYNQKHRNPGGRTGIRGKGALNTLGPNHILH
PIFTRWRDKVLEFLAVWRWALLGGPALAQVLERILGKKLN
EGEEVYKGYVDDSRNTDNAWVETSIITLHCDKNTMADLNH
MVELQWREVSSDACRCSYQREALRQIA
D:  LASWIKENIKKKEQWDKHRHVRETPTDAFGDISFGGLGQK
TGKYVRVSSDTSCENLYQLMTEQWKLRSPNLLISVTGGAK
NFYIKTHLKDKFRRGLIKVAQTTGAWILTGGTHAGVMKHV
GMAVRDYTLSSGSMEGQIVVIGVAPWGVIHNRSTLIHPEG
RFPAYYSLDEQGQGRLSCLDINHTHFLLVDDGTQGHYGVE
IELRARLEKLISKLSLGGVTIPVVCVVLDGGPGTLNTIYN
SMLNHTPCVVLEGSGRLADVIAHVASVPVSKVTMALINRL
LKRFFMQEYKNFTELQIIEWTKKIQDILRMPHLLTVFRID
EDKNYDVDVAILQALLKASRSDEHAGRHCWERQLELAVAW
NRVDIAESEIFTEESQWTSSDLHPAMFSALVGDKPEFVRL
LLENGVCVREFLEREETLCELYSHLPSCFFLRKLAKRVQE
PLPGSRKVCLSHVSEEVRHLLGSFTQPLYIASRYDTVWDP
GRDLFLWAVVQNNRELAEIGWEQCRDCIAAALAASKILRK
LAQESGEDDSEEATEMLELANHYEKQAIGVFSECHSWDAQ
RAQKLLIRISPSWGRSTCLWLALEAHDKSFIAHSGVQALL
TQIWCGELSVDNPHWKVLLCMIFFPLIYTGFLTFRRDEDI
QRQAERTEQQKNCSSRLMSFLKSPQVKFYWNIASYFGFLW
LFAVVLMIDFQTSPSWRELLLYVWLTSLVCEEIRQLYHDG
FRRKAKMYIKDLWNILDVLSIVLFIAGLICRLQASDTVFY
IGKVILCIDFIIFCLRLMAIFSISRTLGPKIIIVRRMMLD
LFFFMFLLSIWVVAYGVAKQGILIENEERLNWIIRGAVYE
PYITIFGNFPTNIDNTLFDISSCSVNASDPLKPKCPMLNA
DNTPVFPEWLTIMMLCVYLLFANILLLNLLIAIFNYTFQE
VQDNTDTIWKFQRYELIKEYHSRPALPPPFILLSHLILFI
RGVFLRHKNFRQELEQTEEEELLSWEAYMKDNYLASTRQD
ESQSVEHRIHDTAEKVGAMSELLEREQEMVXXXXXXXXXX
XXXXXXXXXXXXEEAPHMFARQLQYPDSTVRRFPVPEEKV
SWEVNFSPYQPPVYNQQDKHRNPGGRTGIRGKGALNTLGP
NHILHPIFTRWRDAEHKVLEFLAVWEDAEKRWALLGGPAQ
PDLAQVLERILGKKLKTLLKAGEEVYKGYVDDSRNTDNAW
VETSIITLHTPLMADLNHMVESSLSSHQPLQWREVSSDAC
RCSYQREALRQIAHHH
Description (1)  Transient receptor potential cation channel subfamily M member 8


Functional site

1) chain B
residue 857
type
sequence E
description binding site for residue CA B 1601
source : AC1

2) chain B
residue 860
type
sequence Q
description binding site for residue CA B 1601
source : AC1

3) chain B
residue 883
type
sequence N
description binding site for residue CA B 1601
source : AC1

4) chain B
residue 886
type
sequence D
description binding site for residue CA B 1601
source : AC1

5) chain B
residue 925
type
sequence R
description binding site for residue CA B 1601
source : AC1

6) chain A
residue 857
type
sequence E
description binding site for residue CA A 1601
source : AC2

7) chain A
residue 860
type
sequence Q
description binding site for residue CA A 1601
source : AC2

8) chain A
residue 883
type
sequence N
description binding site for residue CA A 1601
source : AC2

9) chain A
residue 925
type
sequence R
description binding site for residue CA A 1601
source : AC2

10) chain C
residue 857
type
sequence E
description binding site for residue CA C 1601
source : AC3

11) chain C
residue 860
type
sequence Q
description binding site for residue CA C 1601
source : AC3

12) chain C
residue 883
type
sequence N
description binding site for residue CA C 1601
source : AC3

13) chain C
residue 925
type
sequence R
description binding site for residue CA C 1601
source : AC3

14) chain D
residue 857
type
sequence E
description binding site for residue CA D 1601
source : AC4

15) chain D
residue 860
type
sequence Q
description binding site for residue CA D 1601
source : AC4

16) chain D
residue 883
type
sequence N
description binding site for residue CA D 1601
source : AC4

17) chain D
residue 886
type
sequence D
description binding site for residue CA D 1601
source : AC4

18) chain D
residue 925
type
sequence R
description binding site for residue CA D 1601
source : AC4


Display surface

Download
Links