eF-site ID 6cxz-AB
PDB Code 6cxz
Chain A, B

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Title RNA octamer containing 2'-F, 4'-Calpha-Me U.
Classification RNA
Compound RNA (5'-R(*CP*GP*AP*AP*(U4M)P*UP*CP*G)-3')
Source (6CXZ)
Sequence A:  CGAAXUCG
B:  CGAAXUCG
Description


Functional site

1) chain A
residue 6
type
sequence U
description binding site for residue CAC A 101
source : AC1

2) chain A
residue 7
type
sequence C
description binding site for residue CAC A 101
source : AC1

3) chain B
residue 4
type
sequence A
description binding site for residue CAC A 101
source : AC1

4) chain B
residue 4
type
sequence A
description binding site for residue CAC A 101
source : AC1

5) chain B
residue 5
type
sequence X
description binding site for residue CAC A 101
source : AC1

6) chain B
residue 5
type
sequence X
description binding site for residue CAC A 101
source : AC1

7) chain A
residue 4
type
sequence A
description binding site for residue NCO B 101
source : AC2

8) chain B
residue 1
type
sequence C
description binding site for residue NCO B 101
source : AC2

9) chain B
residue 2
type
sequence G
description binding site for residue NCO B 101
source : AC2

10) chain B
residue 7
type
sequence C
description binding site for residue NCO B 101
source : AC2

11) chain B
residue 8
type
sequence G
description binding site for residue NCO B 101
source : AC2

12) chain A
residue 1
type
sequence C
description binding site for Di-nucleotide A B 4 and U4M B 5
source : AC3

13) chain A
residue 4
type
sequence A
description binding site for Di-nucleotide A B 4 and U4M B 5
source : AC3

14) chain A
residue 5
type
sequence X
description binding site for Di-nucleotide A B 4 and U4M B 5
source : AC3

15) chain A
residue 6
type
sequence U
description binding site for Di-nucleotide A B 4 and U4M B 5
source : AC3

16) chain A
residue 6
type
sequence U
description binding site for Di-nucleotide A B 4 and U4M B 5
source : AC3

17) chain A
residue 8
type
sequence G
description binding site for Di-nucleotide A B 4 and U4M B 5
source : AC3

18) chain B
residue 3
type
sequence A
description binding site for Di-nucleotide A B 4 and U4M B 5
source : AC3

19) chain B
residue 6
type
sequence U
description binding site for Di-nucleotide A B 4 and U4M B 5
source : AC3


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