|
|
eF-site ID
|
6cr6-DPT |
|
PDB Code
|
6cr6 |
|
Chain
|
D, P, T |
|
click to enlarge
|
|
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Title
|
Ternary complex crystal structure of DNA polymerase Beta with a dideoxy terminated primer with CH-CH3, beta, gamma dATP analogue |
|
Classification
|
TRANSFERASE/DNA |
|
Compound
|
Template Strand |
|
Source
|
(DPOLB_HUMAN) |
|
|
Sequence
|
D: |
GTCGG
|
| P: |
GCTGATGCGX
|
| T: |
CCGACTGCGCATCAGC
|
|
|
Description
|
|
Functional site
|
|
|
1)
|
chain |
P |
| residue |
9 |
| type |
|
| sequence |
G
|
| description |
binding site for residue NA P 101
|
| source |
: AC1
|
|
|
2)
|
chain |
D |
| residue |
3 |
| type |
|
| sequence |
C
|
| description |
binding site for residue NA D 101
|
| source |
: AC2
|
|
|
3)
|
chain |
P |
| residue |
10 |
| type |
|
| sequence |
X
|
| description |
binding site for residue HGV A 401
|
| source |
: AC3
|
|
|
4)
|
chain |
T |
| residue |
6 |
| type |
|
| sequence |
T
|
| description |
binding site for residue HGV A 401
|
| source |
: AC3
|
|
|
5)
|
chain |
T |
| residue |
7 |
| type |
|
| sequence |
G
|
| description |
binding site for residue HGV A 401
|
| source |
: AC3
|
|
|
6)
|
chain |
P |
| residue |
10 |
| type |
|
| sequence |
X
|
| description |
binding site for residue NA A 403
|
| source |
: AC5
|
|
|
|