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eF-site ID
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6cmo-B |
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PDB Code
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6cmo |
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Chain
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B |
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click to enlarge
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Title
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Rhodopsin-Gi complex |
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Classification
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SIGNALING PROTEIN |
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Compound
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chimera protein of Soluble cytochrome b562 and Rhodopsin |
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Source
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(6CMO) |
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Sequence
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B: |
QSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPV
GRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLI
IWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS
SGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFV
SGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK
SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGV
TDDGMAVATGSWDSFLKIWN
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Description
|
(1) |
Soluble cytochrome b562,Rhodopsin, Guanine nucleotide-binding protein G(i) subunit alpha-1, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Fab light chain, Fab Heavy chain
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Functional site
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|
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1)
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chain |
B |
| residue |
70-84 |
| type |
prosite |
| ligand |
|
| sequence |
LVSASQDGKLIIWDS
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| description |
Trp-Asp (WD) repeats signature.[LIVMSTAC]-[LIVMFYWSTAGC]-[LIMSTAG]-[LIVMSTAGC]-x(2)-[DN]-x-{P}-[LIVMWSTAC]-{DP}-[LIVMFSTAG]-W-[DEN]-[LIVMFSTAGCN].
|
| source |
prosite : PS00678
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2)
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chain |
B |
| residue |
157-171 |
| type |
prosite |
| ligand |
|
| sequence |
IVTSSGDTTCALWDI
|
| description |
Trp-Asp (WD) repeats signature.[LIVMSTAC]-[LIVMFYWSTAGC]-[LIMSTAG]-[LIVMSTAGC]-x(2)-[DN]-x-{P}-[LIVMWSTAC]-{DP}-[LIVMFSTAG]-W-[DEN]-[LIVMFSTAGCN].
|
| source |
prosite : PS00678
|
|
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3)
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chain |
B |
| residue |
285-299 |
| type |
prosite |
| ligand |
|
| sequence |
LLAGYDDFNCNVWDA
|
| description |
Trp-Asp (WD) repeats signature.[LIVMSTAC]-[LIVMFYWSTAGC]-[LIMSTAG]-[LIVMSTAGC]-x(2)-[DN]-x-{P}-[LIVMWSTAC]-{DP}-[LIVMFSTAG]-W-[DEN]-[LIVMFSTAGCN].
|
| source |
prosite : PS00678
|
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