eF-site ID 6cmo-B
PDB Code 6cmo
Chain B

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Title Rhodopsin-Gi complex
Classification SIGNALING PROTEIN
Compound chimera protein of Soluble cytochrome b562 and Rhodopsin
Source (6CMO)
Sequence B:  QSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPV
GRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLI
IWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS
SGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFV
SGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK
SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGV
TDDGMAVATGSWDSFLKIWN
Description (1)  Soluble cytochrome b562,Rhodopsin, Guanine nucleotide-binding protein G(i) subunit alpha-1, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Fab light chain, Fab Heavy chain


Functional site

1) chain B
residue 70-84
type prosite
ligand
sequence LVSASQDGKLIIWDS
description Trp-Asp (WD) repeats signature.[LIVMSTAC]-[LIVMFYWSTAGC]-[LIMSTAG]-[LIVMSTAGC]-x(2)-[DN]-x-{P}-[LIVMWSTAC]-{DP}-[LIVMFSTAG]-W-[DEN]-[LIVMFSTAGCN].
source prosite : PS00678

2) chain B
residue 157-171
type prosite
ligand
sequence IVTSSGDTTCALWDI
description Trp-Asp (WD) repeats signature.[LIVMSTAC]-[LIVMFYWSTAGC]-[LIMSTAG]-[LIVMSTAGC]-x(2)-[DN]-x-{P}-[LIVMWSTAC]-{DP}-[LIVMFSTAG]-W-[DEN]-[LIVMFSTAGCN].
source prosite : PS00678

3) chain B
residue 285-299
type prosite
ligand
sequence LLAGYDDFNCNVWDA
description Trp-Asp (WD) repeats signature.[LIVMSTAC]-[LIVMFYWSTAGC]-[LIMSTAG]-[LIVMSTAGC]-x(2)-[DN]-x-{P}-[LIVMWSTAC]-{DP}-[LIVMFSTAG]-W-[DEN]-[LIVMFSTAGCN].
source prosite : PS00678


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