eF-site ID 6c4i-C
PDB Code 6c4i
Chain C

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Title Conformation of methylated GGQ in the peptidyl transferase center during translation termination
Classification RIBOSOME
Compound 23S rRNA
Source ORGANISM_SCIENTIFIC: Escherichia coli;
Sequence C:  AVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSG
GRNNNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERL
EYDPNRSANIALVLYKDGERRYILAPKGLKAGDQIQSGVD
AAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTY
VQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHM
LRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNFG
KHPVTPWGVQTKGKKTRSNKRTDKFIVRRRS
Description (1)  ribosome


Functional site

1) chain C
residue 224
type
sequence A
description binding site for residue MG A 3018
source : AD4

2) chain C
residue 221
type
sequence R
description binding site for residue MG A 3084
source : AK1

3) chain C
residue 219
type
sequence T
description binding site for residue MG A 3141
source : AP4

4) chain C
residue 221
type
sequence R
description binding site for residue MG A 3141
source : AP4

5) chain C
residue 53
type
sequence H
description binding site for residue MG C 301
source : AY4

6) chain C
residue 218-229
type prosite
sequence PTVRGTAMNPVD
description RIBOSOMAL_L2 Ribosomal protein L2 signature. PtvRGTAmNPvD
source prosite : PS00467


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