eF-site ID
|
6c4i-0123456CDEFGHIJKLMNOPQRSTUVWXYZbcdefghijklmnopqrstuvw |
PDB Code
|
6c4i |
Chain
|
0, 1, 2, 3, 4, 5, 6, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, q, r, s, t, u, v, w |
|
|
|
Title
|
Conformation of methylated GGQ in the peptidyl transferase center during translation termination |
Classification
|
RIBOSOME |
Compound
|
23S rRNA |
Source
|
ORGANISM_SCIENTIFIC: Escherichia coli; |
|
Sequence
|
0: |
AKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDT
PAIRGMINAVSFMVKVEE
|
1: |
MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKC
HPFFTGKQRDVATGGRVDRFNKRFNI
|
2: |
AVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRH
HITADGYYRGRKVIAK
|
3: |
GIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVV
RQHVIYKEAKIK
|
4: |
MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRA
RLTVSK
|
5: |
PKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRK
RHLRPKAMVSKGDLGLVIACLPYA
|
6: |
MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG
|
C: |
AVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSG
GRNNNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERL
EYDPNRSANIALVLYKDGERRYILAPKGLKAGDQIQSGVD
AAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTY
VQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHM
LRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNFG
KHPVTPWGVQTKGKKTRSNKRTDKFIVRRRS
|
D: |
MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDL
ANDGYRAIQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLW
EFRLAEGEEFTVGQSISVELFADVKKVDVTGTSKGKGFAG
TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKK
MAGQMGNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSD
LIVKPAVKA
|
E: |
MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGAR
QGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRS
GGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV
VEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLA
ARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML
A
|
F: |
AKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVG
EAIADKKLLDNAAADLAAISGQKPLITKARKSVAGFKIRQ
GYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAKS
FDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAK
SDEEGRALLAAFDFPFR
|
G: |
SRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAV
EVKHADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVTE
GFTKKLQLVGVGYRAAVKGNVINLSLGFSHPVDHQLPAGI
TAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGKG
VRYADEVVRTKEAKK
|
H: |
MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPAT
KKNIEFFEARRAELEAKLAEVLAAANARAEKINALETVTI
ASKAGDEGKLFGSIGTRDIADAVTAAGVEVAKSEVRLPNG
VLRTTGEHEVSFQVHSEVFAKVIVNVVAE
|
I: |
ALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTEL
RKAGREAGVYMRVVRNTLLRRAVEGTPFECLKDAFVGPTL
IAYSMEHPGAAARLFKEFAKANAKFEVKAAAFEGELIPAS
QIDRLATLPT
|
J: |
QAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAK
TDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLKKAAG
IKSGSGKPNKDKVGKISRAQLQEIAQTKAADMTGADIEAM
TRSIEGTARSMGLVV
|
K: |
MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKH
KAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGH
IGGIKQATFEEMIARRPERVIEIAVKGMLPKGPLGRAMFR
KLKVYAGNEHNHAAQQPQVLDI
|
L: |
MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIK
ITIKEAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFD
GNACVLLNNNSEQPIGTRIFGPVTRELRSEKFMKIISLAP
EVL
|
M: |
MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKS
RSGGGVRRGFEGGQMPLYRRLPKFGFTSRKAAITAEIRLS
DLAKVEGGVVDLNTLKAANIIGIQIEFAKVILAGEVTTPV
TVRGLRVTKGARAAIEAAGGKIEE
|
N: |
MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGR
LTARQIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAV
RMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFKLA
AAKLPIKTTFVTKTVM
|
O: |
MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPK
AKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLF
NELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRS
|
P: |
DKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIA
PNGSEVLVAASTVEKAIAEQLKYTGNKDAAAAVGKAVAER
ALEKGIKDVSFDRSGFQYHGRVQALADAAREAGLQF
|
Q: |
SNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQ
AFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVV
DSISVKRRGAVRKAKLYYLRERTGKAARIKERLN
|
R: |
ARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIK
AGQYAYRDRRQRKRQFRQLWIARINAAARQNGISYSKFIN
GLKKASVEIDRKILADIAVFDKVAFTALVEKAKAALA
|
S: |
MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLM
IANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRR
KHYRKQQGHRQWFTDVKITGISA
|
T: |
METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTN
KKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGP
SMKRIMPRAKGRADRILKRTSHITVVVSDR
|
U: |
MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATK
AEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDW
KKAYVTLKEGQNLD
|
V: |
AAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINL
VKKHQKPVPALNQPGGIVEKEAAIQVSNVAIFNAATGKAD
RVGFRFEDGKKVRFFKSNSETIK
|
W: |
MFTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAI
ELDHDKVMNMQAKAEFYSEVLTIVVDGKEIKVKAQDVQRH
PYKPKLQHIDFVRA
|
X: |
TRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGA
NVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE
|
Y: |
SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVE
SEKRFVTLRVSAKGMRVIDKKGIDTVLAELRARGEKY
|
Z: |
KAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSH
LLKQVRRDVARVKTLLNEKAGA
|
b: |
TVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIIN
LEKTVPMFNEALAELNKIASRKGKILFVGTKRAASEAVKD
AALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQ
DGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALF
VIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPG
NDDAIRAVTLYLGAVAATVREGRSQ
|
c: |
GQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQ
YLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKG
EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSIT
SQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAE
IARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVW
IFKGEILG
|
d: |
ARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQH
GARKPRLSDYGVQLREKQKVRRIYGVLERQFRNYYKEAAR
LKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSHK
AIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALEL
AEQREKPTWLEVDAGKMEGTFKRKPERSDLSADINEHLIV
ELYSK
|
e: |
ELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRVGFG
YGKAREVPAAIQKAMEKARRNMINVALNNGTLQHPVKGVH
TGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYG
STNPINVVRATIDGLENMNSPEMVAAKRGKSVEEIL
|
f: |
MRHYEIVFMVHPDQSEQVPGMIERYTAAITGAEGKIHRLE
DWGRRQLAYPINKLHKAHYVLMNVEAPQEVIDELETTFRF
NDAVIRSMVMRTKHAVTEASPMVK
|
g: |
PRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAES
IVYSALETLAQRSGKSELEAFEVALENVRPTVEVKSRRVG
GSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLA
NELSDAAENKGTAVKKREDVHRMAEANKAFAH
|
h: |
SMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLK
EEGFIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRP
GLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAGL
GGEIICYVA
|
i: |
NQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRET
ARMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGI
TRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRKARR
RPQFSKR
|
j: |
RIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPT
RKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPTEKTV
DALMRLDLAAGVDVQISLG
|
k: |
RKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGF
RGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPG
RESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV
|
l: |
ATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTT
PKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVIL
IRGGRVKXLPGVRYHTVRGALDCSGVKDRKQARSKYGVKR
PKA
|
m: |
ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAE
DVKISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLM
DLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIK
|
n: |
AKQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDR
WNAVLKLQTLPRDSSPSRQRNRCRQTGRPHGFLRKFGLSR
IKVREAAMRGEIPGLKKASW
|
o: |
SLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQG
HFAEHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTQL
IERLGLRR
|
p: |
MVTIRLARHGAKKRPFYQVVVADSRNARNGRFIERVGFFN
PIASEKEEGTRLDLDRIAHWVGQGATISDRVAALIKEVNK
AA
|
q: |
KIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTK
LHVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAV
|
r: |
FCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRA
KYQRQLARAIKRARYLSLLPYTDRHQ
|
s: |
PRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIF
PNMIGLTIAVHNGRQHVPVFVTDEMVGHKLGEFAPTRTYR
GHA
|
t: |
ANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEA
GDKAAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTA
QINKLA
|
u: |
PVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKP
TTERKRAKASAVKRHAKKLARENARRTRLY
|
v: |
INPVNNRIQDLTERSDVLRGYLDYDAKKERLEEVNAELEQ
PDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGL
LELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEY
DSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRGFKT
EIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVR
KSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDV
YRTSGAGGXHVNRTESAVRITHIPTGIVTQCQNDRSQHKN
KDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQI
RSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA
GL
|
w: |
MSRYQHTKGQIKDNAIEALLHDPLFRQRVEKNKKGKGSYM
RKGKHG
|
|
Description
|
(1) |
ribosome
|
|
|
|
1)
|
chain |
E |
residue |
81 |
type |
|
sequence |
G
|
description |
binding site for residue MG A 3007
|
source |
: AC6
|
|
2)
|
chain |
D |
residue |
137 |
type |
|
sequence |
S
|
description |
binding site for residue MG A 3016
|
source |
: AD2
|
|
3)
|
chain |
C |
residue |
224 |
type |
|
sequence |
A
|
description |
binding site for residue MG A 3018
|
source |
: AD4
|
|
4)
|
chain |
5 |
residue |
30 |
type |
|
sequence |
R
|
description |
binding site for residue MG A 3071
|
source |
: AI7
|
|
5)
|
chain |
C |
residue |
221 |
type |
|
sequence |
R
|
description |
binding site for residue MG A 3084
|
source |
: AK1
|
|
6)
|
chain |
M |
residue |
35 |
type |
|
sequence |
H
|
description |
binding site for residue MG A 3092
|
source |
: AK9
|
|
7)
|
chain |
M |
residue |
26 |
type |
|
sequence |
G
|
description |
binding site for residue MG A 3104
|
source |
: AM1
|
|
8)
|
chain |
M |
residue |
99 |
type |
|
sequence |
N
|
description |
binding site for residue MG A 3125
|
source |
: AO1
|
|
9)
|
chain |
D |
residue |
129 |
type |
|
sequence |
T
|
description |
binding site for residue MG A 3132
|
source |
: AO6
|
|
10)
|
chain |
C |
residue |
219 |
type |
|
sequence |
T
|
description |
binding site for residue MG A 3141
|
source |
: AP4
|
|
11)
|
chain |
C |
residue |
221 |
type |
|
sequence |
R
|
description |
binding site for residue MG A 3141
|
source |
: AP4
|
|
12)
|
chain |
E |
residue |
80 |
type |
|
sequence |
S
|
description |
binding site for residue MG A 3143
|
source |
: AP6
|
|
13)
|
chain |
R |
residue |
33 |
type |
|
sequence |
R
|
description |
binding site for residue MG A 3163
|
source |
: AR8
|
|
14)
|
chain |
V |
residue |
68 |
type |
|
sequence |
S
|
description |
binding site for residue MG A 3230
|
source |
: AX8
|
|
15)
|
chain |
V |
residue |
69 |
type |
|
sequence |
N
|
description |
binding site for residue MG A 3230
|
source |
: AX8
|
|
16)
|
chain |
C |
residue |
53 |
type |
|
sequence |
H
|
description |
binding site for residue MG C 301
|
source |
: AY4
|
|
17)
|
chain |
D |
residue |
140 |
type |
|
sequence |
H
|
description |
binding site for residue MG D 301
|
source |
: AY5
|
|
18)
|
chain |
O |
residue |
11 |
type |
|
sequence |
N
|
description |
binding site for residue MG O 201
|
source |
: AY6
|
|
19)
|
chain |
D |
residue |
115 |
type |
|
sequence |
G
|
description |
binding site for residue MG O 202
|
source |
: AY7
|
|
20)
|
chain |
O |
residue |
3 |
type |
|
sequence |
H
|
description |
binding site for residue MG O 202
|
source |
: AY7
|
|
21)
|
chain |
1 |
residue |
16 |
type |
|
sequence |
C
|
description |
binding site for residue ZN 1 101
|
source |
: AY8
|
|
22)
|
chain |
1 |
residue |
18 |
type |
|
sequence |
C
|
description |
binding site for residue ZN 1 101
|
source |
: AY8
|
|
23)
|
chain |
1 |
residue |
36 |
type |
|
sequence |
V
|
description |
binding site for residue ZN 1 101
|
source |
: AY8
|
|
24)
|
chain |
1 |
residue |
37 |
type |
|
sequence |
C
|
description |
binding site for residue ZN 1 101
|
source |
: AY8
|
|
25)
|
chain |
1 |
residue |
40 |
type |
|
sequence |
C
|
description |
binding site for residue ZN 1 101
|
source |
: AY8
|
|
26)
|
chain |
2 |
residue |
20 |
type |
|
sequence |
D
|
description |
binding site for residue MG 2 101
|
source |
: AY9
|
|
27)
|
chain |
6 |
residue |
11 |
type |
|
sequence |
C
|
description |
binding site for residue ZN 6 101
|
source |
: AZ1
|
|
28)
|
chain |
6 |
residue |
14 |
type |
|
sequence |
C
|
description |
binding site for residue ZN 6 101
|
source |
: AZ1
|
|
29)
|
chain |
6 |
residue |
27 |
type |
|
sequence |
C
|
description |
binding site for residue ZN 6 101
|
source |
: AZ1
|
|
30)
|
chain |
6 |
residue |
33 |
type |
|
sequence |
H
|
description |
binding site for residue ZN 6 101
|
source |
: AZ1
|
|
31)
|
chain |
d |
residue |
79 |
type |
|
sequence |
A
|
description |
binding site for residue MG d 301
|
source |
: BI2
|
|
32)
|
chain |
d |
residue |
80 |
type |
|
sequence |
A
|
description |
binding site for residue MG d 301
|
source |
: BI2
|
|
33)
|
chain |
d |
residue |
82 |
type |
|
sequence |
L
|
description |
binding site for residue MG d 301
|
source |
: BI2
|
|
34)
|
chain |
d |
residue |
84 |
type |
|
sequence |
G
|
description |
binding site for residue MG d 301
|
source |
: BI2
|
|
35)
|
chain |
d |
residue |
86 |
type |
|
sequence |
T
|
description |
binding site for residue MG d 301
|
source |
: BI2
|
|
36)
|
chain |
n |
residue |
2 |
type |
|
sequence |
A
|
description |
binding site for residue MG n 201
|
source |
: BI3
|
|
37)
|
chain |
L |
residue |
60-86 |
type |
prosite |
sequence |
AVVVRTKKGVRRPDGSVIRFDGNACVL
|
description |
RIBOSOMAL_L14 Ribosomal protein L14 signature. AVVVrtkkgvrrp.DGsvirFdgNacVL
|
source |
prosite : PS00049
|
|
38)
|
chain |
g |
residue |
20-46 |
type |
prosite |
sequence |
SELLAKFVNILMVDGKKSTAESIVYSA
|
description |
RIBOSOMAL_S7 Ribosomal protein S7 signature. SeLlakFVnilmvdGKKstaesIVysA
|
source |
prosite : PS00052
|
|
39)
|
chain |
h |
residue |
100-117 |
type |
prosite |
sequence |
GIAVVSTSKGVMTDRAAR
|
description |
RIBOSOMAL_S8 Ribosomal protein S8 signature. GiaVVSTSkGVMtdraAR
|
source |
prosite : PS00053
|
|
40)
|
chain |
k |
residue |
97-119 |
type |
prosite |
sequence |
IRALNAAGFRITNITDVTPIPHN
|
description |
RIBOSOMAL_S11 Ribosomal protein S11 signature. IrALnaA.GFrItnitDvTPiPHN
|
source |
prosite : PS00054
|
|
41)
|
chain |
l |
residue |
43-50 |
type |
prosite |
sequence |
KKPNSALR
|
description |
RIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR
|
source |
prosite : PS00055
|
|
42)
|
chain |
q |
residue |
56-68 |
type |
prosite |
sequence |
GDVVEIRECRPLS
|
description |
RIBOSOMAL_S17 Ribosomal protein S17 signature. GDvVeIrEcRPLS
|
source |
prosite : PS00056
|
|
43)
|
chain |
r |
residue |
21-44 |
type |
prosite |
sequence |
IDYKDIATLKNYITESGKIVPSRI
|
description |
RIBOSOMAL_S18 Ribosomal protein S18 signature. IDYkd.IatLknYITEs.GKIvpsRI
|
source |
prosite : PS00057
|
|
44)
|
chain |
m |
residue |
10-38 |
type |
prosite |
sequence |
PDHKHAVIALTSIYGVGKTRSKAILAAAG
|
description |
ADH_SHORT Short-chain dehydrogenases/reductases family signature. PdhkhavialTsiYGVGKTRSkAILaAAG
|
source |
prosite : PS00061
|
|
45)
|
chain |
s |
residue |
53-77 |
type |
prosite |
sequence |
NGRQHVPVFVTDEMVGHKLGEFAPT
|
description |
RIBOSOMAL_S19 Ribosomal protein S19 signature. NGRqhvpvfVtdemVGhkLGEFapT
|
source |
prosite : PS00323
|
|
46)
|
chain |
F |
residue |
57-73 |
type |
prosite |
sequence |
LAAISGQKPLITKARKS
|
description |
RIBOSOMAL_L5 Ribosomal protein L5 signature. LaaISGQkpLiTkARkS
|
source |
prosite : PS00358
|
|
47)
|
chain |
i |
residue |
69-87 |
type |
prosite |
sequence |
GGGISGQAGAIRHGITRAL
|
description |
RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGisGQagAirhGiTRAL
|
source |
prosite : PS00360
|
|
48)
|
chain |
j |
residue |
29-44 |
type |
prosite |
sequence |
AKRTGAQVRGPIPLPT
|
description |
RIBOSOMAL_S10 Ribosomal protein S10 signature. AkrtGAqvrGPIpLPT
|
source |
prosite : PS00361
|
|
49)
|
chain |
o |
residue |
39-69 |
type |
prosite |
sequence |
LQGHFAEHKKDHHSRRGLLRMVSQRRKLLDY
|
description |
RIBOSOMAL_S15 Ribosomal protein S15 signature. LqgHFaehKkDhhSrrgLlrMvsqrrkLldY
|
source |
prosite : PS00362
|
|
50)
|
chain |
U |
residue |
1-66 |
type |
prosite |
sequence |
MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATK
AEIKAAVQKLFEVEVEVVNTLVVKGK
|
description |
TONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. mireerllkvlraphvsekastameksntivlkvakdatkaeikaavqklfevevevv.........................................................NTLVVKGK
|
source |
prosite : PS00430
|
|
51)
|
chain |
T |
residue |
83-107 |
type |
prosite |
sequence |
KRIMPRAKGRADRILKRTSHITVVV
|
description |
RIBOSOMAL_L22 Ribosomal protein L22 signature. KriMpRAkGRadrilkrtSHITVvV
|
source |
prosite : PS00464
|
|
52)
|
chain |
C |
residue |
218-229 |
type |
prosite |
sequence |
PTVRGTAMNPVD
|
description |
RIBOSOMAL_L2 Ribosomal protein L2 signature. PtvRGTAmNPvD
|
source |
prosite : PS00467
|
|
53)
|
chain |
D |
residue |
101-124 |
type |
prosite |
sequence |
FADVKKVDVTGTSKGKGFAGTVKR
|
description |
RIBOSOMAL_L3 Ribosomal protein L3 signature. FadvkkvDvtGtSkGKGfaGtvkR
|
source |
prosite : PS00474
|
|
54)
|
chain |
M |
residue |
109-139 |
type |
prosite |
sequence |
KVILAGEVTTPVTVRGLRVTKGARAAIEAAG
|
description |
RIBOSOMAL_L15 Ribosomal protein L15 signature. KVILaGeVttp..VtVrglrVTkgAraaIeaaG
|
source |
prosite : PS00475
|
|
55)
|
chain |
G |
residue |
154-162 |
type |
prosite |
sequence |
PEPYKGKGV
|
description |
RIBOSOMAL_L6_1 Ribosomal protein L6 signature 1. PEpYKGKGV
|
source |
prosite : PS00525
|
|
56)
|
chain |
n |
residue |
63-85 |
type |
prosite |
sequence |
RCRQTGRPHGFLRKFGLSRIKVR
|
description |
RIBOSOMAL_S14 Ribosomal protein S14 signature. R.CrqtgrphgflrkFGLSRiKVR
|
source |
prosite : PS00527
|
|
57)
|
chain |
c |
residue |
163-197 |
type |
prosite |
sequence |
ARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIG
|
description |
RIBOSOMAL_S3 Ribosomal protein S3 signature. ARtewyreGrVplHt..LradIDyntseahTtyGviG
|
source |
prosite : PS00548
|
|
58)
|
chain |
Z |
residue |
39-53 |
type |
prosite |
sequence |
QSHLLKQVRRDVARV
|
description |
RIBOSOMAL_L29 Ribosomal protein L29 signature. QSHLLKqVRRDVARV
|
source |
prosite : PS00579
|
|
59)
|
chain |
3 |
residue |
21-40 |
type |
prosite |
sequence |
YTTTKNKRTKPEKLELKKFD
|
description |
RIBOSOMAL_L33 Ribosomal protein L33 signature. YtTtKNkrtkPekLElkKFD
|
source |
prosite : PS00582
|
|
60)
|
chain |
e |
residue |
28-60 |
type |
prosite |
sequence |
GRIFSFTALTVVGDGNGRVGFGYGKAREVPAAI
|
description |
RIBOSOMAL_S5 Ribosomal protein S5 signature. GRifsFtAltVVGDgn.GrVGfGygkar.EVpa.AI
|
source |
prosite : PS00585
|
|
61)
|
chain |
N |
residue |
58-69 |
type |
prosite |
sequence |
KRQGKIWIRVFP
|
description |
RIBOSOMAL_L16_1 Ribosomal protein L16 signature 1. KRqGKIWIRVFP
|
source |
prosite : PS00586
|
|
62)
|
chain |
d |
residue |
94-118 |
type |
prosite |
sequence |
LEGRLDNVVYRMGFGATRAEARQLV
|
description |
RIBOSOMAL_S4 Ribosomal protein S4 signature. LEgRLdnvVYRmgfGaTraeARqLV
|
source |
prosite : PS00632
|
|
63)
|
chain |
0 |
residue |
23-55 |
type |
prosite |
sequence |
TLLGLGLRRIGHTVEREDTPAIRGMINAVSFMV
|
description |
RIBOSOMAL_L30 Ribosomal protein L30 signature. TLlgLgLrRigHtVeredtpairgMInaVsfMV
|
source |
prosite : PS00634
|
|
64)
|
chain |
m |
residue |
87-100 |
type |
prosite |
sequence |
RGLRHRRGLPVRGQ
|
description |
RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHrrGlpVRGQ
|
source |
prosite : PS00646
|
|
65)
|
chain |
H |
residue |
13-40 |
type |
prosite |
sequence |
GSLGDQVNVKAGYARNFLVPQGKAVPAT
|
description |
RIBOSOMAL_L9 Ribosomal protein L9 signature. GslGdqvnVkaGYarNFLvpqgkAvpaT
|
source |
prosite : PS00651
|
|
66)
|
chain |
N |
residue |
81-92 |
type |
prosite |
sequence |
RMGKGKGNVEYW
|
description |
RIBOSOMAL_L16_2 Ribosomal protein L16 signature 2. RMGkGKGnveyW
|
source |
prosite : PS00701
|
|
67)
|
chain |
p |
residue |
2-11 |
type |
prosite |
sequence |
VTIRLARHGA
|
description |
RIBOSOMAL_S16 Ribosomal protein S16 signature. VtIRLARHGA
|
source |
prosite : PS00732
|
|
68)
|
chain |
v |
residue |
245-261 |
type |
prosite |
sequence |
RTSGAGGXHVNRTESAV
|
description |
RF_PROK_I Prokaryotic-type class I peptide chain release factors signature. RTsGaGGQHVNrteSAV
|
source |
prosite : PS00745
|
|
69)
|
chain |
K |
residue |
105-127 |
type |
prosite |
sequence |
VKGMLPKGPLGRAMFRKLKVYAG
|
description |
RIBOSOMAL_L13 Ribosomal protein L13 signature. VKGMLPkgpl.GRamfrkLkVYaG
|
source |
prosite : PS00783
|
|
70)
|
chain |
4 |
residue |
2-21 |
type |
prosite |
sequence |
KRTFQPSVLKRNRSHGFRAR
|
description |
RIBOSOMAL_L34 Ribosomal protein L34 signature. KRTFQpsvlkRnrsh.GFraR
|
source |
prosite : PS00784
|
|
71)
|
chain |
6 |
residue |
11-37 |
type |
prosite |
sequence |
CRNCKIVKRDGVIRVICSAEPKHKQRQ
|
description |
RIBOSOMAL_L36 Ribosomal protein L36 signature. CrnCkiVkRdgvIrViCsaepKHkQrQ
|
source |
prosite : PS00828
|
|
72)
|
chain |
X |
residue |
34-48 |
type |
prosite |
sequence |
GSIIVRQRGTKFHAG
|
description |
RIBOSOMAL_L27 Ribosomal protein L27 signature. GsIIvRQRGtkfhaG
|
source |
prosite : PS00831
|
|
73)
|
chain |
5 |
residue |
5-31 |
type |
prosite |
sequence |
KTVRGAAKRFKKTGKGGFKHKHANLRH
|
description |
RIBOSOMAL_L35 Ribosomal protein L35 signature. KTVrGAaKRFkktgkggfkhkhanl.RH
|
source |
prosite : PS00936
|
|
74)
|
chain |
R |
residue |
54-70 |
type |
prosite |
sequence |
KRQFRQLWIARINAAAR
|
description |
RIBOSOMAL_L20 Ribosomal protein L20 signature. KrqfRqLWIARINaaaR
|
source |
prosite : PS00937
|
|
75)
|
chain |
b |
residue |
6-17 |
type |
prosite |
sequence |
MRDMLKAGVHFG
|
description |
RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. MrDMLKAGVHFG
|
source |
prosite : PS00962
|
|
76)
|
chain |
b |
residue |
158-182 |
type |
prosite |
sequence |
PDALFVIDADHEHIAIKEANNLGIP
|
description |
RIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PdaLFViDadhEhiaIkEannlGIP
|
source |
prosite : PS00963
|
|
77)
|
chain |
Q |
residue |
86-101 |
type |
prosite |
sequence |
VKRRGAVRKAKLYYLR
|
description |
RIBOSOMAL_L19 Ribosomal protein L19 signature. VkRrGAVR.KAKLYYLR
|
source |
prosite : PS01015
|
|
78)
|
chain |
f |
residue |
43-52 |
type |
prosite |
sequence |
GRRQLAYPIN
|
description |
RIBOSOMAL_S6 Ribosomal protein S6 signature. GrRQLAYpIN
|
source |
prosite : PS01048
|
|
79)
|
chain |
V |
residue |
8-25 |
type |
prosite |
sequence |
DDEVIVLTGKDKGKRGKV
|
description |
RIBOSOMAL_L24 Ribosomal protein L24 signature. DDeViVLtGkdKGkr.GkV
|
source |
prosite : PS01108
|
|
80)
|
chain |
I |
residue |
8-42 |
type |
prosite |
sequence |
KQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELR
|
description |
RIBOSOMAL_L10 Ribosomal protein L10 signature. KqaIvaeVSevakgalsaVvaDsrGVTVdKMteLR
|
source |
prosite : PS01109
|
|
81)
|
chain |
1 |
residue |
35-56 |
type |
prosite |
sequence |
DVCSKCHPFFTGKQRDVATGGR
|
description |
RIBOSOMAL_L31 Ribosomal protein L31 signature. DVcskcHPFFTgkqrdvatg....GR
|
source |
prosite : PS01143
|
|
82)
|
chain |
O |
residue |
34-56 |
type |
prosite |
sequence |
IKTTLPKAKELRRVVEPLITLAK
|
description |
RIBOSOMAL_L17 Ribosomal protein L17 signature. IkTTlpKaKelrrvvEpLITlAK
|
source |
prosite : PS01167
|
|
83)
|
chain |
S |
residue |
72-94 |
type |
prosite |
sequence |
VKIVKFRRRKHYRKQQGHRQWFT
|
description |
RIBOSOMAL_L21 Ribosomal protein L21 signature. VkivKfrrRKhyrkqqGHRQwfT
|
source |
prosite : PS01169
|
|
84)
|
chain |
u |
residue |
13-25 |
type |
prosite |
sequence |
DVALRRFKRSCEK
|
description |
RIBOSOMAL_S21 Ribosomal protein S21 signature. DvALRRFKRsceK
|
source |
prosite : PS01181
|
|
85)
|
chain |
v |
residue |
252 |
type |
MOD_RES |
sequence |
X
|
description |
N5-methylglutamine => ECO:0000269|PubMed:11118225, ECO:0000269|PubMed:11847124, ECO:0000269|PubMed:28077875
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
86)
|
chain |
I |
residue |
105 |
type |
MOD_RES |
sequence |
K
|
description |
N5-methylglutamine => ECO:0000269|PubMed:11118225, ECO:0000269|PubMed:11847124, ECO:0000269|PubMed:28077875
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
87)
|
chain |
H |
residue |
112 |
type |
MOD_RES |
sequence |
K
|
description |
N5-methylglutamine => ECO:0000269|PubMed:11118225, ECO:0000269|PubMed:11847124, ECO:0000269|PubMed:28077875
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
88)
|
chain |
l |
residue |
108 |
type |
MOD_RES |
sequence |
K
|
description |
N6-acetyllysine => ECO:0000269|PubMed:18723842
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
89)
|
chain |
J |
residue |
39 |
type |
MOD_RES |
sequence |
K
|
description |
N6-acetyllysine => ECO:0000269|PubMed:18723842
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
90)
|
chain |
J |
residue |
71 |
type |
MOD_RES |
sequence |
K
|
description |
N6-succinyllysine => ECO:0000269|PubMed:21151122
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
91)
|
chain |
J |
residue |
80 |
type |
MOD_RES |
sequence |
K
|
description |
N6-succinyllysine => ECO:0000269|PubMed:21151122
|
source |
Swiss-Prot : SWS_FT_FI3
|
|