Title
|
Yeast nucleolar pre-60S ribosomal subunit (state 2) |
Classification
|
RIBOSOME |
Compound
|
Saccharomyces cerevisiae S288c 35S pre-ribosomal RNA miscRNA |
Source
|
ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae BY4741; |
|
Sequence
|
1: |
GUUUGACCUCAAAUCAGGUAGGAGUACCCGCUGAAAAGCG
GAGGAAAAGAAACCAACCGGGAUUGCCUUAGUAACGGCGA
GUGAAGCGGCAAAAGCUCAAAUUUGAAAUCUGGUACCUUC
GGUGCCCGAGUUGUAAUUUGGAGAGGGCAACUUUGGGGCC
GUUCCUUGUCUAUGUUCCUUGGAACAGGACGUCAUAGAGG
GUGAGAAUCCCGUGUGGCGAGGAGUGCGGUUCUUUGUAAA
GUGCCUUCGAAGAGUCGAGUUGUUUUGCAGCUCUAAGUGG
GUGGUAAAUUCCAUCUAAAGCUAAAUAUUGGCGAGAGACC
GAUAGCGAACAAGUACAGUGAUGGAAAGAUGAAAAGAACU
UUGAAAAGAGAGUGAAAAAGUACGUGAAAUUGUUGAAAGG
GAAGGGCAUUUGAUCAGACAUGGUGUUUUGUGCCCUCUGC
UCCUUGUGGGUAGGGGAAUCUCGCAUUUCACUGGGCCAGC
AUCAGUUUUGGUGGCAGGAUAAAUCCAUAGGAAUGUAGCU
UGCCUCGGUAAGUAUUAUAGCCUGUGGGAAUACUGCCAGC
UGGGACUGAGGACUGCGACGUAAGUCAAGGAUGCUGGCAU
AAUGGUUAUAUGCCGCGGACCAAGGAGUCUAACGUCUAUG
CGAGUGUUUGGGUGUAAAACCCAUACGCGUAGGUUGGGGC
CUCGCAAGAGGUGCACAAUCGACCGAUCCUGAUGUCUUCG
GAUGGAUUUGAGUAAGAGCAUAGCUGUUGGGACCCUGGUU
CCUGCCGAAGAACGUAGAGUUAAGGUGCCGGAAUACACGC
UCAUCAGAGGCGCUCAAGCGUGUUACCUAUACUCUACCGU
CAGGGUUGAUAUGAUGCCCUGACGAGUAGGCAGGCGUGGA
GGUCAGUGACGAAGCCUAGACCGUAAGGUCGGGUCGAACG
GCCUCUAGUGCAGAUCUUGGUGGUAGUAGCAAAUUGAUAG
AAUAAUCUAGCGAAACCAAUGUUACCGCAAUAGUAAUUGA
ACUUAGUACGAGAGGAACAGUUCAUUCGGAUAAUUGGUUU
UUGCGGCUGUGCAUUGCCGCGAAGCUACCAUCCGCUGGAU
UAUGGCUGAACGCCUCUAAGUCAGAAUCCAUGCUAGAACG
CGGUGAUCUCCACACAAUAUAGAUGGAUACGAAUAAGGCG
UCCUUGUGGCGUCGCUGAACCAUAGCAGGCUAGCAACGGU
GCACUUGGCGGAAAGGCCUUGGGUGCUUGCUGGCGAAUUG
CAAUGGCGUGGGGAUAAAUCAUUUGUAUACGACUUAGAUG
UACAACGGGGUAUUGUAAGCAGUAGAGUAGCCUUGUUGUU
ACGAUCUGCUGAGAUUAAGCCUUUGUUGUCUGAUUUG
|
2: |
AAACUUUCAACAACGGAUCUCUUGGUUCUCGCAUCGAUGA
AGAACGCAGCGAAAUGCGAUACGUAAUGUGAAUUGCAGAA
UUCCGUGAAUCAUCGAAUCUUUGAACGCACAUUGCGCCCC
UUGGUAUUCCAGGGGGCAUGCCUGUUUGAGCGUCAUUU
|
6: |
CCUUCUCAAACAUUCUGUUUGGUAGUGAGUGAUACUCUUU
GGAGUUAACUUGAAAUUGCUGGCCUUUAGGCGAACAAUGU
UCUUAAA
|
7: |
MTSVRKRKMNRSSVGKATRRNKDKQRKINIQSNPIIAANW
DYSLTMAQNYKKLGLRAKLQTPAGGKEADLSKVVKRIPLT
KPVTEVVKKLEELASRPVIRKERSQSEREEEWLEKLYKKH
GDDYKKMFFDKKLNIYQQSEGDLKRRLLRWKKRNGI
|
8: |
DVKSHLKLLEAKKNKMEAKDELEQIKQKEKEKWQKAMLQA
EGIKIRDDEKLLRKAIKRKEAQKRKSAIEWSERKRVVEDT
ISERQKRREENLRIRKDN
|
A: |
MRLLVSCVDSGSIKEVLCNIGTDTSVQSALQPFHVAPHLA
EGLKAYVDRMWVISEDEAILARNSGVVELVKISKHLKEPK
FDISEFEITSSVSDLFDDAKLESLSSKSVKRTKLVDGFVT
LCPIKKDSSNNTFVAATKSGLLHIIKKGEDKKLIKLASLG
LKAPVEFLQLYDLEDTDTDKYIFAYGGEENLIKLVEIDSS
FQSLKQIWEAKNVKNDRLDMRVPVWPMALRFLEPSPGKTE
KGKLNYQFAAITRWSHLTKYSTQHGRKPFAQIDLLPNREP
LSQMEVFDAKGENVVSSLGNFQSETFNELNVITTDYKKNV
FKFDGNGRMLGKVGRDDITGSSTYIHVHDGKYLLQGGLDR
YVRIFDIKTNKMLVKVYVGSRINFIVMLDDVEIE
|
B: |
LPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTI
VRDLDRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETP
RGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKYSAK
YAQDGAGIERELARIKKYASVVRVLVHTQIRKTPLAQKKA
HLAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMID
AIAVTKGHRGYHSRTSINHKIYRVGKGDDEANGATSFDRT
KKTITPMGGFVHYGEIKNDFIMVKGCIPGNRKRIVTLRKS
LYTNTSRKALEEVSLKWIDTASKFGKGRFQTPAEKHAFMG
TLKK
|
C: |
SRPQVTVHSLTGEATANALPLPAVFSAPIRPDIVHTVFTS
VNKNKRQAYAVSEKAAFGNMCRGGRMFAPTKTWRKWNVKV
NHNEKRYATASAIAATAVASLVLARGHRVEKIPEIPLVVS
TDLESIQKTKEAVAALKAVGAHSDLLKVLKSKKLRAGKGK
YRNRRWTQRRGPLVVYAEDNGIVKALRNVPGVETANVASL
NLLQLAPGAHLGRFVIWTEAAFTKLDQVWGSETVASSKVG
YTLPSHIISTSDVTRIINSSEIQSAIRPAGQATQKRTHVL
KKNPLKNKQVLLRLNPYAKVFAAEKLGSKKAEKT
|
D: |
SDEIVWQVINQSFCSHRIKAPNGQNFCRNEYNVTGLCTRQ
SCPLANSKYATVKCDNGKLYLYMKTPERAHTPAKLWERIK
LSKNYTKALQQIDEHLLHWSKFFRHKCKQRFTKLTQVMIT
ERRLALREEERHYVGVAPKVKRREQNRERKALVAAKIEKA
IEKELMDRLKSGAYGDKPLNVDEKVWKKIM
|
E: |
PKWYPSEDVAALKKTRKAARPQKLRASLVPGTVLILLAGR
FRGKRVVYLKHLEDNTLLISGPFKVNGVPLRRVNARYVIA
TSTKVSVEGVNVEKFNVEYFAKEKLTKKEKKEANLFPEQQ
NKEIKAERVEDQKVVDKALIAEIKKTPLLKQYLSASFSLK
NGDKPHMLKF
|
F: |
AEKILTPESQLKKSKAQQKTAEQVAAERAARKAANKEKRA
IILERNAAYQKEYETAERNIIQAKRDAKAAGSYYVEAQHK
LVFVVRIKGINKIPPKPRKVLQLLRLTRINSGTFVKVTKA
TLELLKLIEPYVAYGYPSYSTIRQLVYKRGFGKINKQRVP
LSDNAIIEANLGKYGILSIDDLIHEIITVGPHFKQANNFL
WPFKLSNPSGGWGVPRKFKHFIQGGSFGNREEFINKLVKS
MN
|
G: |
PEYVRVQRQKKILSIRLKVPPTIAQFQYTLDRNTAAETFK
LFNKYRPETAAEKKERLTKEAAAVAEGKSKQDASPKPYAV
KYGLNHVVALIENKKAKLVLIANDVDPIELVVFLPALCKK
MGVPYAIVKGKARLGTLVNQKTSAVAALTEVRAEDEAALA
KLVSTIDANFADKYDEVKKHWGGGILG
|
I: |
NITNKLKRQEIFADIKHEKNKERHTMRRKRAKEERENPEL
REQRLKENVTQTIENTRVYDETINKEVEGDEDDLMRYFNS
NSNEPPKIFLTTNVNAKKSAYEFANILIEILPNVTFVKRK
FGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPE
GPTFYFKLSSFVEVKKIVGHGRPTSHIPELILNNFQTRLG
QTVGRLFQSILPQNPDIEGRQVITLHNQRDYIFFRRHRYV
FKDNERVGLQELGPQFTLKLKRLQRGIKEETEWEHKPEMD
KEKKKFYL
|
K: |
AIPRERVIKAVNELIKFTSKPKNLLEDDEEELKKDLQLIV
VNNKSFTGTSKSFKLKLLNVKHSFYKPWKEASATAVKDFK
VLLILKDSDIKKVSEDDLFDQLDSEGIKVDEIICGKDLKT
VYKAYEARNAFISQFSLILADDSIVTSLPKLMGGKAYNKV
ETTPISIRTHANKEFSLTTLTNNIKKVYMNQLPVKLPRGT
TLNVHLGNLEWLRPEEFVDNVELISEQLIKAYQIRSIFIK
TNRSPVLPLYYNQDVLDELE
|
L: |
VKVHFDQAGKKVSRRNARATRAAKIAPRPLDLLRPVVRAP
TVKYNRKVRAGRGFTLAEVKAAGLTAAYARTIGIAVDHRR
QNRNQEIFDANVQRLKEYQSKIIVFP
|
M: |
NWRLVEVGRVVLIKKGQSAGKLAAIVEIIDQKKVLIDGPK
AGVPRQAINLGQVVLTPLTFALPRGARTATVSKKWAAAAV
CEKWAASSWAKKIAQRERRAALTDFERFQVMVLRKQKRYT
VKKALAKA
|
N: |
GAYKYLEELQRKKQSDVLRFLQRVRVWEYRQKNVIHRAAR
PTRPDKARRLGYKAKQGFVIYRVRVRRRSLRATAEERVGR
RAANLRVLNSYWVNQDSTYKYFEVILVDPQHKAIRRDARY
NWICDPVHKHREARGLTATGKKSRGINKGHKFNNTKAGRR
KTWKRQNTLSLWRYRK
|
O: |
VEPVVVIDGKGHLVGRLASVVAKQLLNGQKIVVVRAEELN
ISGEFFRNKLKYHDFLRFRAPSRIFYKALRGMVSHKTARG
KAALERLKVFEGIPPPYDKKKRVVVPQALRVLRLKPGRKY
TTLGKLSTSVGWKYEDVVAKLEAKRKVSSAEYYAKKRAFT
KKVASANATAAESDVAKQLAALGY
|
P: |
NPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLE
QVLDHQRAIPFRRFNKARWPAKSVKFVQGLLQNAAANAEA
KGLDATKLYVSHIQVNQAPKQRESSPSHIELVVTEKEEAV
AKAA
|
Q: |
HRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFL
SKINRPPVSVSRIARALKQEGAANKTVVVVGTVTDDARIF
EFPKTTVAALRFTAGARAKIVKAGGECITLDQLAVRAPKG
QNTLILRGPRNS
|
S: |
AHFKEYQVIGRRLPTESVPEPKLFRMRIFASNEVIAKSRY
WYFLQKLHKVKKASGEIVSINQINEAHPTKVKNFGVWVRY
DSRSGTHNMYKEIRDVSRVAAVETLYQDMAARHRARFRSI
HILKVAEIEKTADVKRQYVKQFLTKDLKFPLPHRVQKSTK
TFSYKRPSTFY
|
V: |
GLPVGAIMNCADNSGARNLYIIAVKGSGSRLNRLPAASLG
DMVMATVKKGKPELRKKVMPAIVVRQAKSWRRRDGVFLYF
EDNAGVIANPKGEMKGSAITGPVGKECADLWPRVASNSGV
VV
|
W: |
KRTPFIPESVKNLKKYDPEDPNRRKLARDIEAENGGAGVF
NVNLKDKYLLEDDEWKNDIMPEILDGKNVYDFLDPEIAAK
LQALEEEEEKLENEGFYN
|
Y: |
AKQSLDVSSDRRKARKAYFTAPSSQRRVLLSAPLSKELRA
QYGIKALPIRRDDEVLVVRGSKKGQEGKISSVYRLKFAVQ
VDKVTKEKVNGASVPINLHPSKLVITKLHLDKDRKALIQR
KGGKLE
|
b: |
QRTLLISSRGVNYRHRHLIQDLSGLLPHSRKEPKLDTKKD
LQQLNEIAELYNCNNVLFFEARKHQDLYLWLSKPPNGPTI
KFYIQNLHTMDEXXXXXXXXXGSRPVLSFDQRFESSPHYQ
LIKELLVHNFGVPPXXXXXXXXXDHVMSFSIVDDKIWVRT
YESLVEIGPRFVMTVILILEGSFGGPKIYENKQYVSPNVV
RAQIKQQAAEEAKSRAEAAVERKIKRRENVLAADPLSNDA
LF
|
e: |
PKIVKKHTKKFKRHHSDRYHRVAENWRKQKRGNISQPKIG
YGSNKKTKFLSPSGHKTFLVANVKDLETLTMHTKTYAAEI
AHNISAKNRVVILARAKALGIKVTNPKGRLALEA
|
f: |
AESHRLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQDA
QFYLGKRIAYVYRASKEVRGSKIRVMWGKVTRTHGNSGVV
RATFRNNLPAKTFGASVRIFLYPSNI
|
h: |
AGVKAYELRTKSKEQLASQLVDLKKELAELKVQKLSRPSL
PKIKTVRKSIACVLTVINEQQREAVRQLYKGKKYQPKDLR
AKKTRALRRALTKFEASQVTEKQRKKQIAFPQRKYAIKA
|
i: |
VTSMTPAPKISYKKGAASNRTKFVRSLVREIAGLSPYERR
LIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAA
SRRH
|
j: |
KSHTLCNRCGRRSFHVQKKTCSSCGYPAAKTRSYNWGAKA
KRRHTTGTGRMRYLKHVSRRFKNGFQTGSASK
|
m: |
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
|
n: |
RNFITRSQAVRKLQVSLADFRRLCIFKGIYPTFYYAKDIQ
YLMHEPVLAKFREHKTFARKLTRALGRGEVSSAKRLEENR
DSYTLDHIIKERYPSFPDAIRDIDDALNMLFLFSNLPSTN
QVSSKIINDAQKICNQWLAYVAKERLVRKVFVSIKGVYYQ
ANIKGEEVRWLVPFKFPENIPSDVDFRIMLTFLEFYSTLL
HFVLYKLYTDSGLIYPPKLDLKKDKIISGLSSYILESRKY
DSPVASLFSAFVFYVSREVPIDILEFLILSCGGNVISEAA
MDQIMSKVTHQIVDRPVLKNKVAGRTYIQPQWIFDCINKG
ELVPANKYLPGEALPPHLSPW
|
o: |
EYSGIIYVSRLPHGFHEKELSKYFAQFGDLKEVRLARNKK
TGNSRHYGFLEFVNKEDAMIAQESMNNYLLMGHLLQVRVL
PKGAKIEKLYKYKKRVLVEKGITKPVKQLKDNMKQKHEER
IKKLAKSGIEFKW
|
p: |
EKFEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRD
VLGAAKTGSGKTLAFLIPAIELLHSLKFKPRNGTGIIVIT
PTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKL
MKGVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDEADRI
LEIGFEDEMRQIIKILPNEDRQSMLFSATQTTKVEDLARI
SLRPGPLFINVLEQGYVVCDSDKRFLLLFSFLKRNQKKKI
IVFLSSCNSVKYYAELLNYIDLPVLELHGKQKQQKRTNTF
FEFCNAERGILICTDVAARGLDIPAVDWIIQFDPPDDPRD
YIHRVGRTARGTKGKGKSLMFLTPNELGFLRYLKASKVPL
NEYEFPENKIANVQSQLEKLIKSNYYLHQTAKDGYRSYLQ
AYASHSLKTVYQIDKLDLAKVAKSYGFPVPPKVNITI
|
q: |
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXX
|
s: |
PYEPLIDWFTRHEEVMPLTAVPEPKRRFVPSKNEAKRVMK
IVRAIREGRIIPPKKLKEMKXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXSALRKVPGYGESIRERFERSLDLY
|
t: |
KFVRAESIVAKTLATSREKERIKRVSILEDKKAKNETQHI
ASGKDFILKITEGLIREKTTYDGKPALLFIVRVRGPLAVN
IPNKAFKILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYV
VIGKPSLSSIRSLIQKRGRIIYKGENEAEPHEIVLNDNNI
VEEQLGDHGIICVEDIIHEIATMGESFSVCNFFLQPFKLN
REVSGFGSLNRLRKIKQREAESRTRQFSNAATAPVIEVDI
DSLLAKLN
|
u: |
RIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFK
QRRNPRKLKWTKAFRKAAGKELAVDSTLTFAQRRNVPVRY
NRELVATTLKAMARIEEIRQKRERAFYKNRMRGNKEKDFL
RDKKLVESN
|
v: |
PKSMVIRVGQTSLANHSLNQLVKDFRQIMQPHTAIKLKER
KSNKLKDFVVMCGPLGVTHLFMFTQSEKTGNVSLKIARTP
QGPTVTFQVLDYSLGRDIKKFLKRPKSLNNDDVLNPPLLV
LNGFSTSKRSGEDDQDVNVEKVIVSMFQNIFPPLNPARTS
LNSIKRVFMINKDRETGEISMRHYFIDIREVEKAIKLTEL
GPRLTLKLVKIEEGICSGKVLHHEF
|
w: |
ENIRKVLEKETALRKIAQKGAVKLFNAILATQVKTEKEVS
ENLSEIKNKEEKKELITEVSKEKFLDLVKA
|
x: |
XXXXXXXXXXXXXXXXXXXXXXXXXXXX
|
y: |
MATRTQFENSNEIGVFSKLTNTYCLVAVGGSENFYSAFEA
ELGDAIPIVHTTIAGTRIIGRMTAGNRRGLLVPTQTTDQE
LQHLRNSLPDSVKIQRVEERLSALGNVICCNDYVALVHPD
IDRETEELISDVLGVEVFRQTISGNILVGSYCSLSNQGGL
VHPQTSVQDQEELSSLLQVPLVAGTVNRGSSVVGAGMVVN
DYLAVTGLDTTAPELSVIESIFRLQD
|
z: |
METSNFVKQLSSNNRKTRVNALEALKKYLTAKQFKENKQI
EFNKLWKGLYYAMWFSDRPRPQQRLANELGELHGLYFDPK
DNSTADELTTNDKAFIKFSRGFWKVMCFEWFNIDRYRLDK
YLLLIRRVLFSQLKYLQSRNWDKKLVDEYIKKVLRWLPLS
GSPKVYTGIPIHIVDILLDEWERLLKNKEEEMRKIAESAK
KTPLADVIAIFQDIVADYNNSKVLREKIKEDLFSDTRLVS
WDI
|
|
Description
|
(1) |
Ribosome
|