eF-site ID 6br1-D
PDB Code 6br1
Chain D

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Title Tubulin-RB3_SLD-TTL in complex with heterocyclic pyrimidine compound 4a
Classification CELL CYCLE/INHIBITOR
Compound Tubulin alpha-1B chain
Source ORGANISM_COMMON: Pig; ORGANISM_SCIENTIFIC: Sus scrofa;
Sequence D:  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDS
DLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGP
FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP
DRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETY
CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLLTVPELT
QQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQM
LNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGN
STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE
AESNMNDLVSEYQQYQDATAD
Description


Functional site

1) chain D
residue 10
type
sequence G
description binding site for residue GDP D 501
source : AD3

2) chain D
residue 11
type
sequence Q
description binding site for residue GDP D 501
source : AD3

3) chain D
residue 12
type
sequence C
description binding site for residue GDP D 501
source : AD3

4) chain D
residue 15
type
sequence Q
description binding site for residue GDP D 501
source : AD3

5) chain D
residue 138
type
sequence S
description binding site for residue GDP D 501
source : AD3

6) chain D
residue 141
type
sequence G
description binding site for residue GDP D 501
source : AD3

7) chain D
residue 143
type
sequence T
description binding site for residue GDP D 501
source : AD3

8) chain D
residue 144
type
sequence G
description binding site for residue GDP D 501
source : AD3

9) chain D
residue 176
type
sequence S
description binding site for residue GDP D 501
source : AD3

10) chain D
residue 181
type
sequence E
description binding site for residue GDP D 501
source : AD3

11) chain D
residue 204
type
sequence N
description binding site for residue GDP D 501
source : AD3

12) chain D
residue 222
type
sequence Y
description binding site for residue GDP D 501
source : AD3

13) chain D
residue 226
type
sequence N
description binding site for residue GDP D 501
source : AD3

14) chain D
residue 239
type
sequence C
description binding site for residue E3Y D 502
source : AD4

15) chain D
residue 240
type
sequence L
description binding site for residue E3Y D 502
source : AD4

16) chain D
residue 248
type
sequence A
description binding site for residue E3Y D 502
source : AD4

17) chain D
residue 253
type
sequence L
description binding site for residue E3Y D 502
source : AD4

18) chain D
residue 256
type
sequence N
description binding site for residue E3Y D 502
source : AD4

19) chain D
residue 257
type
sequence M
description binding site for residue E3Y D 502
source : AD4

20) chain D
residue 313
type
sequence V
description binding site for residue E3Y D 502
source : AD4

21) chain D
residue 314
type
sequence A
description binding site for residue E3Y D 502
source : AD4

22) chain D
residue 315
type
sequence A
description binding site for residue E3Y D 502
source : AD4

23) chain D
residue 316
type
sequence I
description binding site for residue E3Y D 502
source : AD4

24) chain D
residue 348
type
sequence N
description binding site for residue E3Y D 502
source : AD4

25) chain D
residue 350
type
sequence K
description binding site for residue E3Y D 502
source : AD4

26) chain D
residue 324
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI10

27) chain D
residue 142
type BINDING
sequence G
description BINDING => ECO:0000250|UniProtKB:Q13509
source Swiss-Prot : SWS_FT_FI1

28) chain D
residue 143
type BINDING
sequence T
description BINDING => ECO:0000250|UniProtKB:Q13509
source Swiss-Prot : SWS_FT_FI1

29) chain D
residue 144
type BINDING
sequence G
description BINDING => ECO:0000250|UniProtKB:Q13509
source Swiss-Prot : SWS_FT_FI1

30) chain D
residue 204
type BINDING
sequence N
description BINDING => ECO:0000250|UniProtKB:Q13509
source Swiss-Prot : SWS_FT_FI1

31) chain D
residue 226
type BINDING
sequence N
description BINDING => ECO:0000250|UniProtKB:Q13509
source Swiss-Prot : SWS_FT_FI1

32) chain D
residue 11
type BINDING
sequence Q
description BINDING => ECO:0000250|UniProtKB:Q13509
source Swiss-Prot : SWS_FT_FI1

33) chain D
residue 138
type BINDING
sequence S
description BINDING => ECO:0000250|UniProtKB:Q13509
source Swiss-Prot : SWS_FT_FI1

34) chain D
residue 69
type BINDING
sequence E
description BINDING => ECO:0000250|UniProtKB:P68363
source Swiss-Prot : SWS_FT_FI2

35) chain D
residue 40
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:P99024
source Swiss-Prot : SWS_FT_FI3

36) chain D
residue 58
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P99024
source Swiss-Prot : SWS_FT_FI4

37) chain D
residue 172
type MOD_RES
sequence S
description Phosphoserine; by CDK1 => ECO:0000250|UniProtKB:Q13885
source Swiss-Prot : SWS_FT_FI5

38) chain D
residue 285
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI6

39) chain D
residue 290
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI6

40) chain D
residue 318
type MOD_RES
sequence R
description Omega-N-methylarginine => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI7

41) chain D
residue 58
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI9


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