|
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eF-site ID
|
6bqf-J |
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PDB Code
|
6bqf |
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Chain
|
J |
|
click to enlarge
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Title
|
Pol II elongation complex with 'dT-AP' at i+1, i-1 position |
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Classification
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TRANSFERASE/TRANSCRIPTION |
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Compound
|
DNA-directed RNA polymerase II subunit RPB1 |
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Source
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(6BQF) |
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Sequence
|
J: |
MIVPVRCFSCGKVVGDKWESYLNLLQEDELDEGTALSRLG
LKRYCCRRMILTHVDLIEKFLRYNP
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Description
|
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Functional site
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|
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1)
|
chain |
J |
| residue |
7 |
| type |
|
| sequence |
C
|
| description |
binding site for residue ZN J 101
|
| source |
: AC8
|
|
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2)
|
chain |
J |
| residue |
10 |
| type |
|
| sequence |
C
|
| description |
binding site for residue ZN J 101
|
| source |
: AC8
|
|
|
3)
|
chain |
J |
| residue |
45 |
| type |
|
| sequence |
C
|
| description |
binding site for residue ZN J 101
|
| source |
: AC8
|
|
|
4)
|
chain |
J |
| residue |
46 |
| type |
|
| sequence |
C
|
| description |
binding site for residue ZN J 101
|
| source |
: AC8
|
|
|
5)
|
chain |
J |
| residue |
10 |
| type |
ZN_FING |
| sequence |
C
|
| description |
C4-type
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
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6)
|
chain |
J |
| residue |
45 |
| type |
ZN_FING |
| sequence |
C
|
| description |
C4-type
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
7)
|
chain |
J |
| residue |
46 |
| type |
ZN_FING |
| sequence |
C
|
| description |
C4-type
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
8)
|
chain |
J |
| residue |
2-11 |
| type |
prosite |
| sequence |
IVPVRCFSCG
|
| description |
RNA_POL_N_8KD RNA polymerases N / 8 Kd subunits signature. IVPVrCFSCG
|
| source |
prosite : PS01112
|
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