eF-site ID 6bdo-AB PDB Code 6bdo Chain A, B click to enlarge Title Structure of bacterial type II NADH dehydrogenase from Caldalkalibacillus thermarum complexed with a quinone inhibitor HQNO at 2.8A resolution Classification OXIDOREDUCTASE/INHIBITOR Compound FAD-dependent pyridine nucleotide-disulfide oxidoreductase Source (F5L3B8_9BACI) Sequence A:  KPSIVILGAGYGGIVAALGLQKRLNYNEADITLVNKNDYH YITTELHQPAAGTMHHDQARVGIKELIDEKKIKFVKDTVV AIDREQQKVTLQNGELHYDYLVVGLGSEPETFGIEGLREH AFSINSINSVRIIRQHIEYQFAKFAAEPERTDYLTIVVGG AGFTGIEFVGELADRMPELCAEYDVDPKLVRIINVEAAPT VLPGFDPALVNYAMDVLGGKGVEFKIGTPIKRCTPEGVVI EVDGEEEEIKAATVVWTGGVRGNSIVEKSGFETMRGRIKV DPYLRAPGHENIFIVGDCALIINEENNRPYPPTAQIAIQH GENVAANLAALIRGGSMTPFKPHIRGTVASLGRNDAIGIV GGRKVYGHAASWLKKLIDMRYLYLIGGLSLVLKK B:  KPSIVILGAGYGGIVAALGLQKRLNYNEADITLVNKNDYH YITTELHQPAAGTMHHDQARVGIKELIDEKKIKFVKDTVV AIDREQQKVTLQNGELHYDYLVVGLGSEPETFGIEGLREH AFSINSINSVRIIRQHIEYQFAKFAAEPERTDYLTIVVGG AGFTGIEFVGELADRMPELCAEYDVDPKLVRIINVEAAPT VLPGFDPALVNYAMDVLGGKGVEFKIGTPIKRCTPEGVVI EVDGEEEEIKAATVVWTGGVRGNSIVEKSGFETMRGRIKV DPYLRAPGHENIFIVGDCALIINEENNRPYPPTAQIAIQH GENVAANLAALIRGGSMTPFKPHIRGTVASLGRNDAIGIV GGRKVYGHAASWLKKLIDMRYLYLIGGLSLVLKK Description Functional site 1) chain B residue 10 type sequence G description binding site for residue FAD B 601 source : AC1 2) chain B residue 12 type sequence G description binding site for residue FAD B 601 source : AC1 3) chain B residue 13 type sequence Y description binding site for residue FAD B 601 source : AC1 4) chain B residue 14 type sequence G description binding site for residue FAD B 601 source : AC1 5) chain B residue 37 type sequence N description binding site for residue FAD B 601 source : AC1 6) chain B residue 38 type sequence K description binding site for residue FAD B 601 source : AC1 7) chain B residue 43 type sequence Y description binding site for residue FAD B 601 source : AC1 8) chain B residue 45 type sequence T description binding site for residue FAD B 601 source : AC1 9) chain B residue 46 type sequence T description binding site for residue FAD B 601 source : AC1 10) chain B residue 79 type sequence D description binding site for residue FAD B 601 source : AC1 11) chain B residue 80 type sequence T description binding site for residue FAD B 601 source : AC1 12) chain B residue 81 type sequence V description binding site for residue FAD B 601 source : AC1 13) chain B residue 107 type sequence L description binding site for residue FAD B 601 source : AC1 14) chain B residue 108 type sequence G description binding site for residue FAD B 601 source : AC1 15) chain B residue 126 type sequence I description binding site for residue FAD B 601 source : AC1 16) chain B residue 165 type sequence F description binding site for residue FAD B 601 source : AC1 17) chain B residue 166 type sequence T description binding site for residue FAD B 601 source : AC1 18) chain B residue 265 type sequence N description binding site for residue FAD B 601 source : AC1 19) chain B residue 267 type sequence I description binding site for residue FAD B 601 source : AC1 20) chain B residue 298 type sequence G description binding site for residue FAD B 601 source : AC1 21) chain B residue 299 type sequence D description binding site for residue FAD B 601 source : AC1 22) chain B residue 314 type sequence P description binding site for residue FAD B 601 source : AC1 23) chain B residue 315 type sequence T description binding site for residue FAD B 601 source : AC1 24) chain B residue 316 type sequence A description binding site for residue FAD B 601 source : AC1 25) chain B residue 317 type sequence Q description binding site for residue FAD B 601 source : AC1 26) chain B residue 319 type sequence A description binding site for residue FAD B 601 source : AC1 27) chain B residue 376 type sequence K description binding site for residue FAD B 601 source : AC1 28) chain B residue 317 type sequence Q description binding site for residue HQO B 602 source : AC2 29) chain B residue 320 type sequence I description binding site for residue HQO B 602 source : AC2 30) chain B residue 348 type sequence G description binding site for residue HQO B 602 source : AC2 31) chain B residue 379 type sequence I description binding site for residue HQO B 602 source : AC2 32) chain B residue 382 type sequence R description binding site for residue HQO B 602 source : AC2 33) chain A residue 10 type sequence G description binding site for residue FAD A 601 source : AC3 34) chain A residue 11 type sequence A description binding site for residue FAD A 601 source : AC3 35) chain A residue 12 type sequence G description binding site for residue FAD A 601 source : AC3 36) chain A residue 13 type sequence Y description binding site for residue FAD A 601 source : AC3 37) chain A residue 14 type sequence G description binding site for residue FAD A 601 source : AC3 38) chain A residue 37 type sequence N description binding site for residue FAD A 601 source : AC3 39) chain A residue 38 type sequence K description binding site for residue FAD A 601 source : AC3 40) chain A residue 43 type sequence Y description binding site for residue FAD A 601 source : AC3 41) chain A residue 45 type sequence T description binding site for residue FAD A 601 source : AC3 42) chain A residue 46 type sequence T description binding site for residue FAD A 601 source : AC3 43) chain A residue 79 type sequence D description binding site for residue FAD A 601 source : AC3 44) chain A residue 80 type sequence T description binding site for residue FAD A 601 source : AC3 45) chain A residue 81 type sequence V description binding site for residue FAD A 601 source : AC3 46) chain A residue 106 type sequence G description binding site for residue FAD A 601 source : AC3 47) chain A residue 107 type sequence L description binding site for residue FAD A 601 source : AC3 48) chain A residue 108 type sequence G description binding site for residue FAD A 601 source : AC3 49) chain A residue 126 type sequence I description binding site for residue FAD A 601 source : AC3 50) chain A residue 165 type sequence F description binding site for residue FAD A 601 source : AC3 51) chain A residue 166 type sequence T description binding site for residue FAD A 601 source : AC3 52) chain A residue 169 type sequence E description binding site for residue FAD A 601 source : AC3 53) chain A residue 265 type sequence N description binding site for residue FAD A 601 source : AC3 54) chain A residue 267 type sequence I description binding site for residue FAD A 601 source : AC3 55) chain A residue 298 type sequence G description binding site for residue FAD A 601 source : AC3 56) chain A residue 299 type sequence D description binding site for residue FAD A 601 source : AC3 57) chain A residue 314 type sequence P description binding site for residue FAD A 601 source : AC3 58) chain A residue 315 type sequence T description binding site for residue FAD A 601 source : AC3 59) chain A residue 316 type sequence A description binding site for residue FAD A 601 source : AC3 60) chain A residue 317 type sequence Q description binding site for residue FAD A 601 source : AC3 61) chain A residue 349 type sequence T description binding site for residue FAD A 601 source : AC3 62) chain A residue 376 type sequence K description binding site for residue FAD A 601 source : AC3

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